Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_N14
         (630 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC094778-1|AAH94778.1|  468|Homo sapiens midnolin protein.            118   2e-26

>BC094778-1|AAH94778.1|  468|Homo sapiens midnolin protein.
          Length = 468

 Score =  118 bits (283), Expect = 2e-26
 Identities = 57/137 (41%), Positives = 88/137 (64%), Gaps = 2/137 (1%)
 Frame = +1

Query: 193 STQSTDITLNIHTTTGGNFSVSLNGXXXXXXXXXXXXXXXXXXXDRICLLHRERQLXDGT 372
           + ++  ++L IH+TTG  + +++                     +R+ LLH++ +L  G 
Sbjct: 25  AAEAAPMSLAIHSTTGTRYDLAVPPDETVEGLRKRLSQRLKVPKERLALLHKDTRLSSGK 84

Query: 373 LEENGLMDGSRVILLPSVETGLLSQX--PXNTVMQALXSLNDTQVNDFLSGKSPLNLTMR 546
           L+E G+ DGS++ L+P+VE GL+SQ   P  +VMQAL SL +TQV+DFLSG+SPL L +R
Sbjct: 85  LQEFGVGDGSKLTLVPTVEAGLMSQASRPEQSVMQALESLTETQVSDFLSGRSPLTLALR 144

Query: 547 LGDHMMLIQLQLSTLHS 597
           +GDHMM +QLQL+  H+
Sbjct: 145 VGDHMMFVQLQLAAQHA 161


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,966,620
Number of Sequences: 237096
Number of extensions: 1523919
Number of successful extensions: 6295
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 6249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6294
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)