Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_N10
         (654 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      24   1.1  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   1.9  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   2.6  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   4.5  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   7.9  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +3

Query: 462 PYHIRILRTTVRQEPAIGLKRRHVGTLQEIVRVVVHGQ 575
           PY   +L++T  + P I L+      L  +V  + HG+
Sbjct: 55  PYFRELLKSTPCKHPVIVLQDVAFSDLHALVEFIYHGE 92


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +3

Query: 384 PRCCLRNWNRRRSHHRDPVHAFQLWYPYHI 473
           P CC + W+ ++S  R  +++  L YP  I
Sbjct: 364 PNCCGK-WSSQKSEPRRSIYSSLLRYPRSI 392


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -1

Query: 144 VERLRGVQPWGCTCK 100
           VE   G  PW C CK
Sbjct: 917 VELSLGSNPWSCRCK 931


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -3

Query: 196 RCRSPS*PCEGSRHPRPGRKAPR 128
           +C S     E  R+P PG K PR
Sbjct: 44  QCASLKLAFEPRRNPGPGSKGPR 66


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = -1

Query: 177 SLAKGLGIRGRVERLRGVQ 121
           S+ +GLG++G  + ++GVQ
Sbjct: 830 SVLQGLGVQGVQQGVQGVQ 848


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,323
Number of Sequences: 438
Number of extensions: 3409
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)