Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_N04
         (651 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1397 - 29861108-29861206,29861683-29861748,29862066-298621...    54   7e-08

>06_03_1397 -
           29861108-29861206,29861683-29861748,29862066-29862155,
           29862604-29862652,29862820-29862950,29863989-29864087,
           29864169-29864204,29864467-29864557,29864814-29864994,
           29865063-29865150,29865222-29865335
          Length = 347

 Score = 54.4 bits (125), Expect = 7e-08
 Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
 Frame = +3

Query: 348 QFRLLLPYCSKKLKWEILFDVSIPWFAPDFKF--DDESF--LISXDENFLEXKVPSLAKW 515
           +F L +P+C   + W+ L++   P  APD  F  DDE F  L+  DE     K   LA W
Sbjct: 54  RFTLAIPFCLDYVYWDFLYNALSPKVAPDVVFGPDDEGFQPLVDFDETGSGEK-SCLANW 112

Query: 516 NESDPTALSNVIFELVNLYKSHXIXKLSXDDSSRAYFEYSALL 644
           +  D +AL ++I EL   Y  +   + +  D +R  FE S +L
Sbjct: 113 DCRDTSALLSLIKELREFYIEYQKKRAAEVDDARLKFEISTVL 155


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,435,176
Number of Sequences: 37544
Number of extensions: 240299
Number of successful extensions: 412
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 412
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)