Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_M24
(548 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein. 236 4e-62
BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16 p... 236 4e-62
BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16 p... 236 4e-62
AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16 p... 236 4e-62
BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein. 136 4e-32
AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens ... 110 3e-24
BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal... 50 7e-06
BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein. 50 7e-06
BC093771-1|AAH93771.1| 1127|Homo sapiens NCK-associated protein ... 31 2.7
BC093769-1|AAH93769.1| 1127|Homo sapiens NCK-associated protein ... 31 2.7
AL122010-1|CAI23556.1| 979|Homo sapiens discs, large (Drosophil... 31 3.5
AK126054-1|BAC86416.1| 926|Homo sapiens protein ( Homo sapiens ... 30 4.6
Y08201-1|CAA69383.1| 331|Homo sapiens rab geranylgeranyl transf... 29 8.1
X98001-1|CAA66638.1| 331|Homo sapiens geranylgeranyl transferas... 29 8.1
U49245-1|AAA91473.1| 331|Homo sapiens geranylgeranyl transferas... 29 8.1
D84124-1|BAA28219.1| 509|Homo sapiens prostacyclin synthase pro... 29 8.1
D83402-1|BAA11910.1| 500|Homo sapiens prostacyclin synthase pro... 29 8.1
D38145-1|BAA07343.1| 500|Homo sapiens prostacyclin synthase pro... 29 8.1
CR456941-1|CAG33222.1| 331|Homo sapiens RABGGTB protein. 29 8.1
BC101811-1|AAI01812.1| 500|Homo sapiens prostaglandin I2 (prost... 29 8.1
BC101809-1|AAI01810.1| 500|Homo sapiens prostaglandin I2 (prost... 29 8.1
BC020790-1|AAH20790.1| 331|Homo sapiens Rab geranylgeranyltrans... 29 8.1
AL357314-5|CAI22393.1| 331|Homo sapiens Rab geranylgeranyltrans... 29 8.1
AL118525-1|CAC14162.1| 500|Homo sapiens prostaglandin I2 (prost... 29 8.1
AF297052-1|AAG31785.1| 500|Homo sapiens prostacyclin synthase p... 29 8.1
AF297051-1|AAG31784.1| 500|Homo sapiens prostacyclin synthase p... 29 8.1
AF297050-1|AAG31783.1| 500|Homo sapiens prostacyclin synthase p... 29 8.1
AF297049-1|AAG31782.1| 500|Homo sapiens prostacyclin synthase p... 29 8.1
AF297048-1|AAG31781.1| 500|Homo sapiens prostacyclin synthase p... 29 8.1
AB209023-1|BAD92260.1| 320|Homo sapiens Rab geranylgeranyltrans... 29 8.1
>M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein.
Length = 146
Score = 236 bits (577), Expect = 4e-62
Identities = 106/131 (80%), Positives = 125/131 (95%)
Frame = +2
Query: 47 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 226
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 227 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASXKEIKDILVQYDRSLLVADPR 406
VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDEAS KEIKDIL+QYDR+LLVADPR
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPR 125
Query: 407 RCEPKKFGGPG 439
RCE KKFGGPG
Sbjct: 126 RCESKKFGGPG 136
>BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 236 bits (577), Expect = 4e-62
Identities = 106/131 (80%), Positives = 125/131 (95%)
Frame = +2
Query: 47 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 226
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 227 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASXKEIKDILVQYDRSLLVADPR 406
VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDEAS KEIKDIL+QYDR+LLVADPR
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPR 125
Query: 407 RCEPKKFGGPG 439
RCE KKFGGPG
Sbjct: 126 RCESKKFGGPG 136
>BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 236 bits (577), Expect = 4e-62
Identities = 106/131 (80%), Positives = 125/131 (95%)
Frame = +2
Query: 47 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 226
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 227 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASXKEIKDILVQYDRSLLVADPR 406
VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDEAS KEIKDIL+QYDR+LLVADPR
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPR 125
Query: 407 RCEPKKFGGPG 439
RCE KKFGGPG
Sbjct: 126 RCESKKFGGPG 136
>AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 236 bits (577), Expect = 4e-62
Identities = 106/131 (80%), Positives = 125/131 (95%)
Frame = +2
Query: 47 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 226
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 227 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASXKEIKDILVQYDRSLLVADPR 406
VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDEAS KEIKDIL+QYDR+LLVADPR
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPR 125
Query: 407 RCEPKKFGGPG 439
RCE KKFGGPG
Sbjct: 126 RCESKKFGGPG 136
>BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein.
Length = 152
Score = 136 bits (330), Expect = 4e-32
Identities = 60/83 (72%), Positives = 75/83 (90%)
Frame = +2
Query: 47 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 226
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 227 VDIRVTVKGGGHVAQVYAIRQAI 295
VDIRV VKGGGHVAQ+Y Q +
Sbjct: 66 VDIRVRVKGGGHVAQIYGESQEL 88
>AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ40618 fis, clone THYMU2013089, moderately
similar to 40S RIBOSOMAL PROTEIN S16. ).
Length = 178
Score = 110 bits (265), Expect = 3e-24
Identities = 57/108 (52%), Positives = 75/108 (69%)
Frame = +2
Query: 50 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 229
+Q+VQ+F K+ A AV C+ G G +R+N PL+++ LQYKL E LLL KE+ + +
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 230 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASXKEIKDILVQ 373
DI V VKG GHV Q+YA+ Q ISKAL+ Y KYVDEAS +EIKD L +
Sbjct: 78 DIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEAS-EEIKDTLTR 124
>BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal
protein S9 protein.
Length = 396
Score = 49.6 bits (113), Expect = 7e-06
Identities = 44/124 (35%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Frame = +2
Query: 71 GRKKTATAVAYC-KRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 247
G++KTA A A K G G ++VNG L P + Q + Q ++ D+ TV
Sbjct: 274 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTV 332
Query: 248 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASXKEIKDILVQYDRSLLVADPRRCEPKKF 427
GGG AQ AIR A++KAL +F + DE LL DPR E KK
Sbjct: 333 SGGGRSAQAGAIRLAMAKALCSFVTE--DEVEWMR--------QAGLLTTDPRVRERKKP 382
Query: 428 GGPG 439
G G
Sbjct: 383 GQEG 386
>BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein.
Length = 302
Score = 49.6 bits (113), Expect = 7e-06
Identities = 44/124 (35%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Frame = +2
Query: 71 GRKKTATAVAYC-KRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 247
G++KTA A A K G G ++VNG L P + Q + Q ++ D+ TV
Sbjct: 180 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTV 238
Query: 248 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASXKEIKDILVQYDRSLLVADPRRCEPKKF 427
GGG AQ AIR A++KAL +F + DE LL DPR E KK
Sbjct: 239 SGGGRSAQAGAIRLAMAKALCSFVTE--DEVEWMR--------QAGLLTTDPRVRERKKP 288
Query: 428 GGPG 439
G G
Sbjct: 289 GQEG 292
>BC093771-1|AAH93771.1| 1127|Homo sapiens NCK-associated protein
1-like protein.
Length = 1127
Score = 31.1 bits (67), Expect = 2.7
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +2
Query: 158 EPRLLQYKLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVD 334
+P L K EP L +KF +D+R + + H+ V+ + I + L +YQ +VD
Sbjct: 42 KPPFLLEKSMEPSLKYINKKFPNIDVRNSTQ---HLGPVHREKAEIIRFLTNYYQSFVD 97
>BC093769-1|AAH93769.1| 1127|Homo sapiens NCK-associated protein
1-like protein.
Length = 1127
Score = 31.1 bits (67), Expect = 2.7
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +2
Query: 158 EPRLLQYKLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVD 334
+P L K EP L +KF +D+R + + H+ V+ + I + L +YQ +VD
Sbjct: 42 KPPFLLEKSMEPSLKYINKKFPNIDVRNSTQ---HLGPVHREKAEIIRFLTNYYQSFVD 97
>AL122010-1|CAI23556.1| 979|Homo sapiens discs, large (Drosophila)
homolog-associated protein 3 protein.
Length = 979
Score = 30.7 bits (66), Expect = 3.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 226 GRHQSDSQGWWSCSTSLRYPTSYFKG 303
GRHQ+ S GWWS +L + + G
Sbjct: 251 GRHQAKSTGWWSSDDNLDSDSGFLAG 276
>AK126054-1|BAC86416.1| 926|Homo sapiens protein ( Homo sapiens
cDNA FLJ44066 fis, clone TESTI4036909, weakly similar
to Regulator of nonsense transcripts 1. ).
Length = 926
Score = 30.3 bits (65), Expect = 4.6
Identities = 18/80 (22%), Positives = 34/80 (42%)
Frame = +2
Query: 125 LRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKA 304
L P + R+ + K P KF ++ + T+K + QV+ + + + A
Sbjct: 385 LLTTSSPTIVSNKRVSKRKFIPPAFTNVSTKFELLSLGATLKLASELIQVHKLNKDQATA 444
Query: 305 LIAFYQKYVDEASXKEIKDI 364
LI Q S +E+K++
Sbjct: 445 LIQIAQMMASHESIEEVKEL 464
>Y08201-1|CAA69383.1| 331|Homo sapiens rab geranylgeranyl
transferase protein.
Length = 331
Score = 29.5 bits (63), Expect = 8.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 238 SDSQGWWSCSTSLRYPTSYFKGSDRLLPEIC 330
SD GWW C L P+ G LP++C
Sbjct: 212 SDLLGWWLCERQL--PSGGLNGRPEKLPDVC 240
>X98001-1|CAA66638.1| 331|Homo sapiens geranylgeranyl transferase
II protein.
Length = 331
Score = 29.5 bits (63), Expect = 8.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 238 SDSQGWWSCSTSLRYPTSYFKGSDRLLPEIC 330
SD GWW C L P+ G LP++C
Sbjct: 212 SDLLGWWLCERQL--PSGGLNGRPEKLPDVC 240
>U49245-1|AAA91473.1| 331|Homo sapiens geranylgeranyl transferase
type II beta-subunit protein.
Length = 331
Score = 29.5 bits (63), Expect = 8.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 238 SDSQGWWSCSTSLRYPTSYFKGSDRLLPEIC 330
SD GWW C L P+ G LP++C
Sbjct: 212 SDLLGWWLCERQL--PSGGLNGRPEKLPDVC 240
>D84124-1|BAA28219.1| 509|Homo sapiens prostacyclin synthase
protein.
Length = 509
Score = 29.5 bits (63), Expect = 8.1
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 295 FKGSDRLLPEICRRSLKXGNQRHPSSIR 378
F+ DRLLP++ R SL G++ H S++
Sbjct: 216 FRQLDRLLPKLARGSLSVGDKDHMCSVK 243
>D83402-1|BAA11910.1| 500|Homo sapiens prostacyclin synthase
protein.
Length = 500
Score = 29.5 bits (63), Expect = 8.1
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 295 FKGSDRLLPEICRRSLKXGNQRHPSSIR 378
F+ DRLLP++ R SL G++ H S++
Sbjct: 207 FRQLDRLLPKLARGSLSVGDKDHMCSVK 234
>D38145-1|BAA07343.1| 500|Homo sapiens prostacyclin synthase
protein.
Length = 500
Score = 29.5 bits (63), Expect = 8.1
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 295 FKGSDRLLPEICRRSLKXGNQRHPSSIR 378
F+ DRLLP++ R SL G++ H S++
Sbjct: 207 FRQLDRLLPKLARGSLSVGDKDHMCSVK 234
>CR456941-1|CAG33222.1| 331|Homo sapiens RABGGTB protein.
Length = 331
Score = 29.5 bits (63), Expect = 8.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 238 SDSQGWWSCSTSLRYPTSYFKGSDRLLPEIC 330
SD GWW C L P+ G LP++C
Sbjct: 212 SDLLGWWLCERQL--PSGGLNGRPEKLPDVC 240
>BC101811-1|AAI01812.1| 500|Homo sapiens prostaglandin I2
(prostacyclin) synthase protein.
Length = 500
Score = 29.5 bits (63), Expect = 8.1
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 295 FKGSDRLLPEICRRSLKXGNQRHPSSIR 378
F+ DRLLP++ R SL G++ H S++
Sbjct: 207 FRQLDRLLPKLARGSLSVGDKDHMCSVK 234
>BC101809-1|AAI01810.1| 500|Homo sapiens prostaglandin I2
(prostacyclin) synthase protein.
Length = 500
Score = 29.5 bits (63), Expect = 8.1
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 295 FKGSDRLLPEICRRSLKXGNQRHPSSIR 378
F+ DRLLP++ R SL G++ H S++
Sbjct: 207 FRQLDRLLPKLARGSLSVGDKDHMCSVK 234
>BC020790-1|AAH20790.1| 331|Homo sapiens Rab
geranylgeranyltransferase, beta subunit protein.
Length = 331
Score = 29.5 bits (63), Expect = 8.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 238 SDSQGWWSCSTSLRYPTSYFKGSDRLLPEIC 330
SD GWW C L P+ G LP++C
Sbjct: 212 SDLLGWWLCERQL--PSGGLNGRPEKLPDVC 240
>AL357314-5|CAI22393.1| 331|Homo sapiens Rab
geranylgeranyltransferase, beta subunit protein.
Length = 331
Score = 29.5 bits (63), Expect = 8.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 238 SDSQGWWSCSTSLRYPTSYFKGSDRLLPEIC 330
SD GWW C L P+ G LP++C
Sbjct: 212 SDLLGWWLCERQL--PSGGLNGRPEKLPDVC 240
>AL118525-1|CAC14162.1| 500|Homo sapiens prostaglandin I2
(prostacyclin) synthase protein.
Length = 500
Score = 29.5 bits (63), Expect = 8.1
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 295 FKGSDRLLPEICRRSLKXGNQRHPSSIR 378
F+ DRLLP++ R SL G++ H S++
Sbjct: 207 FRQLDRLLPKLARGSLSVGDKDHMCSVK 234
>AF297052-1|AAG31785.1| 500|Homo sapiens prostacyclin synthase
protein.
Length = 500
Score = 29.5 bits (63), Expect = 8.1
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 295 FKGSDRLLPEICRRSLKXGNQRHPSSIR 378
F+ DRLLP++ R SL G++ H S++
Sbjct: 207 FRQLDRLLPKLARGSLSVGDKDHMCSVK 234
>AF297051-1|AAG31784.1| 500|Homo sapiens prostacyclin synthase
protein.
Length = 500
Score = 29.5 bits (63), Expect = 8.1
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 295 FKGSDRLLPEICRRSLKXGNQRHPSSIR 378
F+ DRLLP++ R SL G++ H S++
Sbjct: 207 FRQLDRLLPKLARGSLSVGDKDHMCSVK 234
>AF297050-1|AAG31783.1| 500|Homo sapiens prostacyclin synthase
protein.
Length = 500
Score = 29.5 bits (63), Expect = 8.1
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 295 FKGSDRLLPEICRRSLKXGNQRHPSSIR 378
F+ DRLLP++ R SL G++ H S++
Sbjct: 207 FRQLDRLLPKLARGSLSVGDKDHMCSVK 234
>AF297049-1|AAG31782.1| 500|Homo sapiens prostacyclin synthase
protein.
Length = 500
Score = 29.5 bits (63), Expect = 8.1
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 295 FKGSDRLLPEICRRSLKXGNQRHPSSIR 378
F+ DRLLP++ R SL G++ H S++
Sbjct: 207 FRQLDRLLPKLARGSLSVGDKDHMCSVK 234
>AF297048-1|AAG31781.1| 500|Homo sapiens prostacyclin synthase
protein.
Length = 500
Score = 29.5 bits (63), Expect = 8.1
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 295 FKGSDRLLPEICRRSLKXGNQRHPSSIR 378
F+ DRLLP++ R SL G++ H S++
Sbjct: 207 FRQLDRLLPKLARGSLSVGDKDHMCSVK 234
>AB209023-1|BAD92260.1| 320|Homo sapiens Rab
geranylgeranyltransferase, beta subunit variant protein.
Length = 320
Score = 29.5 bits (63), Expect = 8.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 238 SDSQGWWSCSTSLRYPTSYFKGSDRLLPEIC 330
SD GWW C L P+ G LP++C
Sbjct: 212 SDLLGWWLCERQL--PSGGLNGRPEKLPDVC 240
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,004,304
Number of Sequences: 237096
Number of extensions: 1957353
Number of successful extensions: 4783
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 4641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4781
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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