Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_M22
         (655 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB7585 Cluster: PREDICTED: hypothetical protein;...    57   3e-07
UniRef50_A2R079 Cluster: Contig An12c0240, complete genome; n=5;...    36   1.1  
UniRef50_A5UW86 Cluster: ROK family protein; n=2; Roseiflexus|Re...    35   1.5  
UniRef50_Q65ZH3 Cluster: Putative uncharacterized protein; n=4; ...    35   1.5  
UniRef50_Q2TZT2 Cluster: Predicted protein; n=1; Aspergillus ory...    33   7.9  

>UniRef50_UPI0000DB7585 Cluster: PREDICTED: hypothetical protein;
           n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
           - Apis mellifera
          Length = 61

 Score = 57.2 bits (132), Expect = 3e-07
 Identities = 29/63 (46%), Positives = 39/63 (61%)
 Frame = +3

Query: 141 MESWLDDIKRVRIPRPKFGNKYPVEPPKDYLXNSDLSGKTRRHDNKDFVKATEELRRTLQ 320
           MESWL D++RVRIPRPKFG+   V      + +  +  +      +D  KATEELR+ LQ
Sbjct: 1   MESWLSDVQRVRIPRPKFGSGNSVRRSNSTVQH--VRPEVLSRQTQDVAKATEELRQALQ 58

Query: 321 EKL 329
           +KL
Sbjct: 59  DKL 61


>UniRef50_A2R079 Cluster: Contig An12c0240, complete genome; n=5;
           Trichocomaceae|Rep: Contig An12c0240, complete genome -
           Aspergillus niger
          Length = 900

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
 Frame = -3

Query: 227 ILGRLHWILVPEFRSWDSHAFDV--VQPALHLSCDLSNFYGYPLGYVITHLVCKQ----V 66
           + GRLHWI V +   W++H++ V  ++P   L C       +  G   T ++       +
Sbjct: 778 VRGRLHWINVMQDWGWEAHSYSVPGLRPG-SLVCSTRAHLHHRAGAATTIVILASFPTWL 836

Query: 65  LRKGCLDGITRA 30
           L  GC  GITRA
Sbjct: 837 LSLGCFVGITRA 848


>UniRef50_A5UW86 Cluster: ROK family protein; n=2; Roseiflexus|Rep:
           ROK family protein - Roseiflexus sp. RS-1
          Length = 340

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +1

Query: 196 GTSIQWSLPRITXRTVTSAAKRGDTITKTLLKRLRSYVG 312
           G  + + L +IT   +  AA+ GDT+ + +L+R  SY+G
Sbjct: 222 GALVDYDLNKITPGVIARAAENGDTVAREILQRAGSYLG 260


>UniRef50_Q65ZH3 Cluster: Putative uncharacterized protein; n=4;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 1592

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 23/83 (27%), Positives = 39/83 (46%)
 Frame = +3

Query: 153 LDDIKRVRIPRPKFGNKYPVEPPKDYLXNSDLSGKTRRHDNKDFVKATEELRRTLQEKL* 332
           ++D +  R    +F +  PV+PPK    + +L+GK  +   ++   A + LR   +EK  
Sbjct: 382 IEDFRIRRKEAEEFNDNSPVKPPKARKTD-ELTGKISKEQPEEMKSAEKSLRGVKEEKEK 440

Query: 333 PPLTDMFVASNFLILIENEFNKN 401
           P + D       L  IEN   +N
Sbjct: 441 PKVVDPNDPLERLRQIENRLGQN 463


>UniRef50_Q2TZT2 Cluster: Predicted protein; n=1; Aspergillus
           oryzae|Rep: Predicted protein - Aspergillus oryzae
          Length = 616

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 17/62 (27%), Positives = 28/62 (45%)
 Frame = -1

Query: 415 DKGKEFLLNSFSIKMRKFEATNISVNGGHSFSCNVRRNSSVALTKSLLSCRLVLPLRSLF 236
           D  +E+ + S++  M+  E +N    GGHSF  +V +         + SC   LP    +
Sbjct: 113 DHYREWAMQSYNFYMKYAEVSNEHEKGGHSFGLSVAKLHQFFYEDVITSCNTRLPRSEHY 172

Query: 235 XK 230
            K
Sbjct: 173 EK 174


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 638,175,943
Number of Sequences: 1657284
Number of extensions: 12372519
Number of successful extensions: 29621
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 28735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29617
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)