Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_M22
         (655 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC150276-1|AAI50277.1| 1618|Homo sapiens KIAA0556 protein.             31   2.7  
AB011128-1|BAA25482.2| 1625|Homo sapiens KIAA0556 protein protein.     31   2.7  
AF265555-1|AAF75772.1| 4829|Homo sapiens ubiquitin-conjugating B...    30   6.3  
AF110377-1|AAD04629.1| 3859|Homo sapiens PCAF-associated factor ...    30   8.3  
AF076974-1|AAD09420.1| 3830|Homo sapiens TRRAP protein protein.        30   8.3  
AC004991-1|AAC27675.2| 2089|Homo sapiens unknown protein.              30   8.3  
AB209489-1|BAD92726.1| 3587|Homo sapiens Transformation/transcri...    30   8.3  

>BC150276-1|AAI50277.1| 1618|Homo sapiens KIAA0556 protein.
          Length = 1618

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = +3

Query: 165 KRVRIPRPKFGNKYPVEPPKDYLXNSDLSGKTRRHDNKDFVKATEELRRTLQ 320
           K V+I R + G +  +EPP DY  + +L G      N       +ELRR+L+
Sbjct: 137 KSVQI-RTEAGPRLHIEPPVDYSDDFELCGDVTLQANNTSEDRPQELRRSLE 187


>AB011128-1|BAA25482.2| 1625|Homo sapiens KIAA0556 protein protein.
          Length = 1625

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = +3

Query: 165 KRVRIPRPKFGNKYPVEPPKDYLXNSDLSGKTRRHDNKDFVKATEELRRTLQ 320
           K V+I R + G +  +EPP DY  + +L G      N       +ELRR+L+
Sbjct: 144 KSVQI-RTEAGPRLHIEPPVDYSDDFELCGDVTLQANNTSEDRPQELRRSLE 194


>AF265555-1|AAF75772.1| 4829|Homo sapiens ubiquitin-conjugating
            BIR-domain enzyme APOLLON protein.
          Length = 4829

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
 Frame = -3

Query: 209  WILVPEFRSWDSHAFDVVQPALHLSCDLSNF-YGYPLGYVITHLVCKQV-LRKGCLDGIT 36
            W L  +  SWD H F++V P    +C + +  + + L   IT++   QV L K    G+ 
Sbjct: 1049 WKLQTDSNSWDEHVFELVLPK---ACMVGHVDFKFVLNSNITNIPQIQVTLLKNKAPGLG 1105

Query: 35   RAHALTFETRR 3
            + +AL  E  +
Sbjct: 1106 KVNALNIEVEQ 1116


>AF110377-1|AAD04629.1| 3859|Homo sapiens PCAF-associated factor 400
            protein.
          Length = 3859

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 14/61 (22%), Positives = 27/61 (44%)
 Frame = +1

Query: 145  RAGWTTSNA*ESHDRNSGTSIQWSLPRITXRTVTSAAKRGDTITKTLLKRLRSYVGHYKK 324
            R  W + N  E H + +  +  W  P++    + +  KR     + L + LR++ G +  
Sbjct: 1668 RRVWVSENFQERHRKENMAATNWKEPKLLAYCLLNYCKRNYGDIELLFQLLRAFTGRFLC 1727

Query: 325  N 327
            N
Sbjct: 1728 N 1728


>AF076974-1|AAD09420.1| 3830|Homo sapiens TRRAP protein protein.
          Length = 3830

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 14/61 (22%), Positives = 27/61 (44%)
 Frame = +1

Query: 145  RAGWTTSNA*ESHDRNSGTSIQWSLPRITXRTVTSAAKRGDTITKTLLKRLRSYVGHYKK 324
            R  W + N  E H + +  +  W  P++    + +  KR     + L + LR++ G +  
Sbjct: 1650 RRVWVSENFQERHRKENMAATNWKEPKLLAYCLLNYCKRNYGDIELLFQLLRAFTGRFLC 1709

Query: 325  N 327
            N
Sbjct: 1710 N 1710


>AC004991-1|AAC27675.2| 2089|Homo sapiens unknown protein.
          Length = 2089

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 14/61 (22%), Positives = 27/61 (44%)
 Frame = +1

Query: 145  RAGWTTSNA*ESHDRNSGTSIQWSLPRITXRTVTSAAKRGDTITKTLLKRLRSYVGHYKK 324
            R  W + N  E H + +  +  W  P++    + +  KR     + L + LR++ G +  
Sbjct: 1650 RRVWVSENFQERHRKENMAATNWKEPKLLAYCLLNYCKRNYGDIELLFQLLRAFTGRFLC 1709

Query: 325  N 327
            N
Sbjct: 1710 N 1710


>AB209489-1|BAD92726.1| 3587|Homo sapiens Transformation/transcription
            domain-associated protein variant protein.
          Length = 3587

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 14/61 (22%), Positives = 27/61 (44%)
 Frame = +1

Query: 145  RAGWTTSNA*ESHDRNSGTSIQWSLPRITXRTVTSAAKRGDTITKTLLKRLRSYVGHYKK 324
            R  W + N  E H + +  +  W  P++    + +  KR     + L + LR++ G +  
Sbjct: 1389 RRVWVSENFQERHRKENMAATNWKEPKLLAYCLLNYCKRNYGDIELLFQLLRAFTGRFLC 1448

Query: 325  N 327
            N
Sbjct: 1449 N 1449


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,041,057
Number of Sequences: 237096
Number of extensions: 1853804
Number of successful extensions: 3014
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3014
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)