Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_M22
(655 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical pr... 35 0.044
U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical pr... 35 0.044
U40942-4|AAC47069.2| 486|Caenorhabditis elegans Hypothetical pr... 31 0.71
U40942-3|AAU05564.1| 487|Caenorhabditis elegans Hypothetical pr... 31 0.71
U37548-9|AAR25651.1| 1852|Caenorhabditis elegans Calcium channel... 30 1.2
U37548-8|AAM51534.1| 1837|Caenorhabditis elegans Calcium channel... 30 1.2
U37548-7|AAR25652.1| 1885|Caenorhabditis elegans Calcium channel... 30 1.2
U37548-6|AAR25653.1| 1844|Caenorhabditis elegans Calcium channel... 30 1.2
AY322480-1|AAP84337.1| 1844|Caenorhabditis elegans T-type voltag... 30 1.2
AY313900-1|AAP79883.1| 1852|Caenorhabditis elegans T-type calciu... 30 1.2
AY313899-1|AAP79882.1| 1885|Caenorhabditis elegans T-type calciu... 30 1.2
AY313898-1|AAP79881.1| 1837|Caenorhabditis elegans T-type calciu... 30 1.2
AF368920-1|AAK53427.1| 1837|Caenorhabditis elegans voltage-depen... 30 1.2
AC024791-13|AAF60665.1| 301|Caenorhabditis elegans Hypothetical... 28 6.7
Z81497-7|CAB04083.3| 652|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z75955-17|CAB00127.3| 652|Caenorhabditis elegans Hypothetical p... 27 8.8
Z70782-5|CAA94843.1| 322|Caenorhabditis elegans Hypothetical pr... 27 8.8
>U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical
protein B0496.3a protein.
Length = 1551
Score = 35.1 bits (77), Expect = 0.044
Identities = 23/83 (27%), Positives = 38/83 (45%)
Frame = +3
Query: 153 LDDIKRVRIPRPKFGNKYPVEPPKDYLXNSDLSGKTRRHDNKDFVKATEELRRTLQEKL* 332
++D + R +F + PV+PPK +L+GK + ++ A + LR +EK
Sbjct: 382 IEDFRIRRKEAEEFNDNSPVKPPKAR-KTDELTGKISKEQPEEMKSAEKSLRGVKEEKEK 440
Query: 333 PPLTDMFVASNFLILIENEFNKN 401
P + D L IEN +N
Sbjct: 441 PKVVDPNDPLERLRQIENRLGQN 463
>U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical
protein B0496.3b protein.
Length = 1592
Score = 35.1 bits (77), Expect = 0.044
Identities = 23/83 (27%), Positives = 38/83 (45%)
Frame = +3
Query: 153 LDDIKRVRIPRPKFGNKYPVEPPKDYLXNSDLSGKTRRHDNKDFVKATEELRRTLQEKL* 332
++D + R +F + PV+PPK +L+GK + ++ A + LR +EK
Sbjct: 382 IEDFRIRRKEAEEFNDNSPVKPPKAR-KTDELTGKISKEQPEEMKSAEKSLRGVKEEKEK 440
Query: 333 PPLTDMFVASNFLILIENEFNKN 401
P + D L IEN +N
Sbjct: 441 PKVVDPNDPLERLRQIENRLGQN 463
>U40942-4|AAC47069.2| 486|Caenorhabditis elegans Hypothetical
protein K02E10.4a protein.
Length = 486
Score = 31.1 bits (67), Expect = 0.71
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -2
Query: 618 QITHPPSPTITASPLKYKVKASTTL 544
Q H P PT T SP Y+VKA+T L
Sbjct: 198 QRKHAPPPTTTKSPRGYRVKATTPL 222
>U40942-3|AAU05564.1| 487|Caenorhabditis elegans Hypothetical
protein K02E10.4b protein.
Length = 487
Score = 31.1 bits (67), Expect = 0.71
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -2
Query: 618 QITHPPSPTITASPLKYKVKASTTL 544
Q H P PT T SP Y+VKA+T L
Sbjct: 199 QRKHAPPPTTTKSPRGYRVKATTPL 223
>U37548-9|AAR25651.1| 1852|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform c protein.
Length = 1852
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 125 INHMKDGELVGRHQTRENPTTEI 193
I H+K+GEL +T E PTT+I
Sbjct: 1744 IEHVKEGELDEEEETEEGPTTQI 1766
>U37548-8|AAM51534.1| 1837|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform a protein.
Length = 1837
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 125 INHMKDGELVGRHQTRENPTTEI 193
I H+K+GEL +T E PTT+I
Sbjct: 1729 IEHVKEGELDEEEETEEGPTTQI 1751
>U37548-7|AAR25652.1| 1885|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform d protein.
Length = 1885
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 125 INHMKDGELVGRHQTRENPTTEI 193
I H+K+GEL +T E PTT+I
Sbjct: 1777 IEHVKEGELDEEEETEEGPTTQI 1799
>U37548-6|AAR25653.1| 1844|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform e protein.
Length = 1844
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 125 INHMKDGELVGRHQTRENPTTEI 193
I H+K+GEL +T E PTT+I
Sbjct: 1736 IEHVKEGELDEEEETEEGPTTQI 1758
>AY322480-1|AAP84337.1| 1844|Caenorhabditis elegans T-type voltage
sensitive calciumchannel alpha1 subunit isoform D
protein.
Length = 1844
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 125 INHMKDGELVGRHQTRENPTTEI 193
I H+K+GEL +T E PTT+I
Sbjct: 1736 IEHVKEGELDEEEETEEGPTTQI 1758
>AY313900-1|AAP79883.1| 1852|Caenorhabditis elegans T-type calcium
channel alpha1 subunitisoform C protein.
Length = 1852
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 125 INHMKDGELVGRHQTRENPTTEI 193
I H+K+GEL +T E PTT+I
Sbjct: 1744 IEHVKEGELDEEEETEEGPTTQI 1766
>AY313899-1|AAP79882.1| 1885|Caenorhabditis elegans T-type calcium
channel alpha1 subunitisoform B protein.
Length = 1885
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 125 INHMKDGELVGRHQTRENPTTEI 193
I H+K+GEL +T E PTT+I
Sbjct: 1777 IEHVKEGELDEEEETEEGPTTQI 1799
>AY313898-1|AAP79881.1| 1837|Caenorhabditis elegans T-type calcium
channel alpha1 subunitisoform A protein.
Length = 1837
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 125 INHMKDGELVGRHQTRENPTTEI 193
I H+K+GEL +T E PTT+I
Sbjct: 1729 IEHVKEGELDEEEETEEGPTTQI 1751
>AF368920-1|AAK53427.1| 1837|Caenorhabditis elegans voltage-dependent
calcium channelalpha13 subunit protein.
Length = 1837
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 125 INHMKDGELVGRHQTRENPTTEI 193
I H+K+GEL +T E PTT+I
Sbjct: 1729 IEHVKEGELDEEEETEEGPTTQI 1751
>AC024791-13|AAF60665.1| 301|Caenorhabditis elegans Hypothetical
protein Y47G6A.18 protein.
Length = 301
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 134 MKDGELVGRHQTRENPTTEIREQVSSGASQ 223
M DG+LV R + E P TE ++ S ++Q
Sbjct: 1 MSDGQLVQRRRKAEEPVTEKVDEASGDSAQ 30
>Z81497-7|CAB04083.3| 652|Caenorhabditis elegans Hypothetical
protein R07B7.2 protein.
Length = 652
Score = 27.5 bits (58), Expect = 8.8
Identities = 21/79 (26%), Positives = 32/79 (40%)
Frame = +2
Query: 77 KLGV*LRSQADNRKSLINHMKDGELVGRHQTRENPTTEIREQVSSGASQGLLXEQ*PQRQ 256
++G+ S D H + + R +T N I QV+ ASQ + P+
Sbjct: 195 QIGINETSLNDADSQSFFHSRLHQTEQREETNSNSMQSIHSQVNPPASQETMESHFPEMI 254
Query: 257 NEATR*QRLC*SD*GVTSD 313
N +LC S VTS+
Sbjct: 255 NSRKSDHQLCFSFKKVTSE 273
>Z75955-17|CAB00127.3| 652|Caenorhabditis elegans Hypothetical
protein R07B7.2 protein.
Length = 652
Score = 27.5 bits (58), Expect = 8.8
Identities = 21/79 (26%), Positives = 32/79 (40%)
Frame = +2
Query: 77 KLGV*LRSQADNRKSLINHMKDGELVGRHQTRENPTTEIREQVSSGASQGLLXEQ*PQRQ 256
++G+ S D H + + R +T N I QV+ ASQ + P+
Sbjct: 195 QIGINETSLNDADSQSFFHSRLHQTEQREETNSNSMQSIHSQVNPPASQETMESHFPEMI 254
Query: 257 NEATR*QRLC*SD*GVTSD 313
N +LC S VTS+
Sbjct: 255 NSRKSDHQLCFSFKKVTSE 273
>Z70782-5|CAA94843.1| 322|Caenorhabditis elegans Hypothetical
protein R04B5.7 protein.
Length = 322
Score = 27.5 bits (58), Expect = 8.8
Identities = 19/59 (32%), Positives = 24/59 (40%)
Frame = +3
Query: 219 PKDYLXNSDLSGKTRRHDNKDFVKATEELRRTLQEKL*PPLTDMFVASNFLILIENEFN 395
P DYL + N FV + +L + PPLTD F NFL N F+
Sbjct: 265 PLDYLDEMLFNHNQNIEANNLFVPPFDS---SLLQPFEPPLTDFFSQPNFLFETMNSFS 320
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,752,411
Number of Sequences: 27780
Number of extensions: 301651
Number of successful extensions: 767
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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