Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_M21
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF026209-2|AAN84883.1|  863|Caenorhabditis elegans Gex interacti...    57   1e-08
AF026209-1|AAB71278.2|  968|Caenorhabditis elegans Gex interacti...    57   1e-08
U23159-1|AAA85857.1| 1005|Caenorhabditis elegans bifunctional gl...    56   2e-08
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr...    34   0.076
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in...    31   0.94 
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in...    31   0.94 
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in...    31   0.94 
Z81062-14|CAB02947.2|  362|Caenorhabditis elegans Hypothetical p...    28   5.0  
AC025716-16|AAK39609.2|  917|Caenorhabditis elegans Hypothetical...    28   5.0  

>AF026209-2|AAN84883.1|  863|Caenorhabditis elegans Gex interacting
           protein protein7, isoform b protein.
          Length = 863

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
 Frame = +1

Query: 247 IXSSEVLEFIAXLHRNFDEKIXLLYXNRKRRAVEIKNDP-FIDFKNSPE--RXDKSWKIA 417
           I + + L F+  L+  F+ +   L   R +   +I N   F DF    E  R D+ WK A
Sbjct: 456 ILTPDALRFLHDLNTEFNPRRLRLLSKRNQVQADINNSLWFPDFNKETEVLRSDQGWKGA 515

Query: 418 PLPIRLQNRHLXLGDVSASNTAHFVVALNEDVQGIQVDFDDGHCPTWRNQLLAFNNINLA 597
            +P  LQ+R + +     ++    + A+N        DF+D + PTWRNQL    N+  A
Sbjct: 516 EIPRDLQDRRVEI--TGPTDRKMVINAMNSGANVFMADFEDSNSPTWRNQLEGQINLYDA 573

Query: 598 VSGKL 612
           V   +
Sbjct: 574 VRNNI 578


>AF026209-1|AAB71278.2|  968|Caenorhabditis elegans Gex interacting
           protein protein7, isoform a protein.
          Length = 968

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
 Frame = +1

Query: 247 IXSSEVLEFIAXLHRNFDEKIXLLYXNRKRRAVEIKNDP-FIDFKNSPE--RXDKSWKIA 417
           I + + L F+  L+  F+ +   L   R +   +I N   F DF    E  R D+ WK A
Sbjct: 456 ILTPDALRFLHDLNTEFNPRRLRLLSKRNQVQADINNSLWFPDFNKETEVLRSDQGWKGA 515

Query: 418 PLPIRLQNRHLXLGDVSASNTAHFVVALNEDVQGIQVDFDDGHCPTWRNQLLAFNNINLA 597
            +P  LQ+R + +     ++    + A+N        DF+D + PTWRNQL    N+  A
Sbjct: 516 EIPRDLQDRRVEI--TGPTDRKMVINAMNSGANVFMADFEDSNSPTWRNQLEGQINLYDA 573

Query: 598 VSGKL 612
           V   +
Sbjct: 574 VRNNI 578


>U23159-1|AAA85857.1| 1005|Caenorhabditis elegans bifunctional
           glyoxylate cycle proteinprotein.
          Length = 1005

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
 Frame = +1

Query: 247 IXSSEVLEFIAXLHRNFDEKIXLLYXNRKRRAVEIKNDP-FIDFKNSPE--RXDKSWKIA 417
           I + + L F+  L+  F+ +   L   R +   +I N   F DF    E  R D+ WK A
Sbjct: 496 ILTPDALAFLHDLNTEFNPRRLRLLSKRNQVQADINNSLWFPDFNKETEVLRSDQGWKGA 555

Query: 418 PLPIRLQNRHLXLGDVSASNTAHFVVALNEDVQGIQVDFDDGHCPTWRNQLLAFNNINLA 597
            +P  LQ+R + +     ++    + A+N        DF+D + PTWRNQL    N+  A
Sbjct: 556 EIPRDLQDRRVEI--TGPTDRKMVINAMNSGANVFMADFEDSNSPTWRNQLEGQINLYDA 613

Query: 598 VSGKL 612
           V   +
Sbjct: 614 VRNNI 618


>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical protein
            K10G4.5 protein.
          Length = 1251

 Score = 34.3 bits (75), Expect = 0.076
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
 Frame = +1

Query: 424  PIRLQNRHLXLGDVSASNTAHFVVALNEDVQGI---QVDFDDGHCPTWRNQLLAFNNINL 594
            PIR++NR     DV      H +    E +      Q+ FDD H     +QL++ + +NL
Sbjct: 841  PIRIKNRDCM--DVLCDEMKHILEKNPEKLNEFIVEQMGFDDEHLMRLHDQLVSISKVNL 898

Query: 595  AVSGKLQ 615
              +GK+Q
Sbjct: 899  ITAGKVQ 905


>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
            interacting proteinprotein 1, isoform d protein.
          Length = 2350

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
 Frame = +1

Query: 223  KLEELQKTIXSSEVLEF-IAXLHRNFDEKIXLLYXNRKRRAVEIKNDPFIDFKNSPERXD 399
            KL  L+K +  S   E  +    R++DEKI  LY   ++    IK D + DF+N  ++  
Sbjct: 1178 KLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQK----IK-DEWDDFRNDADKEI 1232

Query: 400  KSWKIAPLPIRLQNRHL 450
            + WK     +R + + L
Sbjct: 1233 QKWKTDAYTVRSEAKAL 1249


>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
            interacting proteinprotein 1, isoform b protein.
          Length = 2117

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
 Frame = +1

Query: 223  KLEELQKTIXSSEVLEF-IAXLHRNFDEKIXLLYXNRKRRAVEIKNDPFIDFKNSPERXD 399
            KL  L+K +  S   E  +    R++DEKI  LY   ++    IK D + DF+N  ++  
Sbjct: 1251 KLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQK----IK-DEWDDFRNDADKEI 1305

Query: 400  KSWKIAPLPIRLQNRHL 450
            + WK     +R + + L
Sbjct: 1306 QKWKTDAYTVRSEAKAL 1322


>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
            interacting proteinprotein 1, isoform a protein.
          Length = 2396

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
 Frame = +1

Query: 223  KLEELQKTIXSSEVLEF-IAXLHRNFDEKIXLLYXNRKRRAVEIKNDPFIDFKNSPERXD 399
            KL  L+K +  S   E  +    R++DEKI  LY   ++    IK D + DF+N  ++  
Sbjct: 1251 KLNNLEKQLADSLNRENELEREKRDYDEKINSLYGQNQK----IK-DEWDDFRNDADKEI 1305

Query: 400  KSWKIAPLPIRLQNRHL 450
            + WK     +R + + L
Sbjct: 1306 QKWKTDAYTVRSEAKAL 1322


>Z81062-14|CAB02947.2|  362|Caenorhabditis elegans Hypothetical
           protein F15A4.3 protein.
          Length = 362

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -2

Query: 597 SQIYVVESEKLIPPCWAVTVIKIYLDPLNILI 502
           + IY++    L+  CW    IK++ D +NI++
Sbjct: 38  TSIYILTGYILVRICWIFLTIKVFHDNMNIMM 69


>AC025716-16|AAK39609.2|  917|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.5 protein.
          Length = 917

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 101 IQLSTQVQLCRVSCCADYLLNXKIITTLWC 190
           +++   + LC  S C D L N K  + +WC
Sbjct: 713 LKIVYSMTLCSKSACEDILKNGKFASLVWC 742


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,503,060
Number of Sequences: 27780
Number of extensions: 255295
Number of successful extensions: 542
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 542
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)