Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_M16
         (602 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0353 - 33317015-33318235,33318567-33318824,33319587-333199...    28   6.5  
03_05_0629 + 26248960-26249236,26249766-26249894,26250291-262508...    28   6.5  

>03_06_0353 -
           33317015-33318235,33318567-33318824,33319587-33319904,
           33319949-33320011,33320103-33320496,33320684-33320796,
           33320932-33321639,33321667-33323199,33323395-33323607,
           33323718-33324700,33324890-33325423,33325694-33325820,
           33326083-33326162,33327347-33327377,33327949-33328053,
           33328119-33328124,33328349-33328985,33329144-33329478,
           33330394-33331113
          Length = 2792

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +1

Query: 193 DFHRTFHSFSFPNKISTMDSVSGKQETSHKPQ-DSLQITES 312
           D  +   S  +P+K   M+ +  K ETS KP  DS ++ ES
Sbjct: 457 DVDKRVSSCPYPSKTEEMERLGLKSETSKKPPLDSSKVKES 497


>03_05_0629 +
           26248960-26249236,26249766-26249894,26250291-26250847,
           26250933-26251250
          Length = 426

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +3

Query: 180 SIILRFSSNIPFLLFSKQN*YYGFSKWQTRNF 275
           ++ILRFS ++PF LF +   +  F+K  T  +
Sbjct: 296 ALILRFSRDLPFCLFLQTVAFVAFNKVMTAQY 327


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,489,066
Number of Sequences: 37544
Number of extensions: 302659
Number of successful extensions: 713
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 713
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)