Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_M16
         (602 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    26   0.82 
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    26   1.1  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    25   2.5  
DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.       24   3.3  

>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 26.2 bits (55), Expect = 0.82
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -2

Query: 463 CWCWDAEK 440
           CWCWD EK
Sbjct: 522 CWCWDLEK 529


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 268 ETSHKPQDSLQITESCXPDSG 330
           ET+HK Q    +T+ C  D+G
Sbjct: 687 ETNHKGQRDFDLTQDCTDDAG 707


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 17/49 (34%), Positives = 27/49 (55%)
 Frame = -2

Query: 235 FCLEKRRNGMFDENRRIIE*LQ*SKNFVPIFTKIARTEEYSISHTYREG 89
           FC+EK R+G ++  R  +E L   +N    F   A  E  S++ T++EG
Sbjct: 6   FCIEKLRSGGYETWRFKVEMLLVRENLWK-FESTAAPE--SLTETWKEG 51


>DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.
          Length = 383

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +2

Query: 119 LLRPRNFRKNRY-KVFASLQSFNYPAIFIEHS 211
           L +P N  +  Y + +AS   FNYP  F EH+
Sbjct: 108 LEKPENQARVDYIQDYASGPDFNYPPEFYEHT 139


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 628,923
Number of Sequences: 2352
Number of extensions: 12425
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58450473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)