Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_M16
         (602 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC005005-1|AAH05005.1|  609|Homo sapiens chromosome 17 open read...    29   9.5  
AY163812-1|AAO25513.1|  573|Homo sapiens HLC-8 protein.                29   9.5  
AK000728-1|BAA91344.1|  462|Homo sapiens protein ( Homo sapiens ...    29   9.5  

>BC005005-1|AAH05005.1|  609|Homo sapiens chromosome 17 open reading
           frame 80 protein.
          Length = 609

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 29/102 (28%), Positives = 38/102 (37%), Gaps = 5/102 (4%)
 Frame = +1

Query: 202 RTFHSFSFPNKISTMDSVSGKQETSHKPQDSLQITESCXPDSGDFVMPSVLELVQ-ERAH 378
           RT  S    N  +T DSV+GK+    +P  SL I              S   L       
Sbjct: 325 RTVMSHGCEN-FNTRDSVTGKESQGERPHLSLFIPRETTYQFHSVSQSSSQSLASLATTF 383

Query: 379 LQELDRELQXLHTLPQ----LESPTSQHPSTNKGDQRINSVH 492
           LQE   E Q  + +P     +ESP  Q     K D +  + H
Sbjct: 384 LQEKKAEAQNHNCVPDVKALMESPEGQLSLEPKSDSQFQASH 425


>AY163812-1|AAO25513.1|  573|Homo sapiens HLC-8 protein.
          Length = 573

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 29/102 (28%), Positives = 37/102 (36%), Gaps = 5/102 (4%)
 Frame = +1

Query: 202 RTFHSFSFPNKISTMDSVSGKQETSHKPQDSLQITESCXPDSGDFVMPSVLELVQ-ERAH 378
           RT  S    N  +T DSV+GK+    +P  SL I              S   L       
Sbjct: 325 RTVMSHGCEN-FNTRDSVTGKESQGERPHLSLLIPRETTYQFHSVSQSSSQSLASLATTF 383

Query: 379 LQELDRELQXLHTLPQ----LESPTSQHPSTNKGDQRINSVH 492
           LQE   E Q  + +P     +ESP  Q     K D    + H
Sbjct: 384 LQEKKAEAQNHNRVPDVKALMESPEGQLSLEPKSDSHFQASH 425


>AK000728-1|BAA91344.1|  462|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20721 fis, clone HEP15722. ).
          Length = 462

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 29/102 (28%), Positives = 38/102 (37%), Gaps = 5/102 (4%)
 Frame = +1

Query: 202 RTFHSFSFPNKISTMDSVSGKQETSHKPQDSLQITESCXPDSGDFVMPSVLELVQ-ERAH 378
           RT  S    N  +T DSV+GK+    +P  SL I              S   L       
Sbjct: 204 RTVMSHGCEN-FNTRDSVTGKESQGERPHLSLFIPRETTYQFHSVSQSSSQSLASLATTF 262

Query: 379 LQELDRELQXLHTLPQ----LESPTSQHPSTNKGDQRINSVH 492
           LQE   E Q  + +P     +ESP  Q     K D +  + H
Sbjct: 263 LQEKKAEAQNHNCVPDVKALMESPEGQLSLEPKSDSQFQASH 304


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,529,089
Number of Sequences: 237096
Number of extensions: 1741319
Number of successful extensions: 7057
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7057
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)