Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_M13
         (654 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82062-1|CAB04889.2|  183|Caenorhabditis elegans Hypothetical pr...    35   0.044
Z81107-11|CAJ90502.1|  476|Caenorhabditis elegans Hypothetical p...    29   3.8  
Z81107-10|CAB03233.1|  646|Caenorhabditis elegans Hypothetical p...    29   3.8  
Z73103-12|CAJ90500.1|  476|Caenorhabditis elegans Hypothetical p...    29   3.8  
Z73103-11|CAA97431.1|  646|Caenorhabditis elegans Hypothetical p...    29   3.8  
Z71177-4|CAA94870.1|  529|Caenorhabditis elegans Hypothetical pr...    27   8.8  

>Z82062-1|CAB04889.2|  183|Caenorhabditis elegans Hypothetical
           protein W02A11.2 protein.
          Length = 183

 Score = 35.1 bits (77), Expect = 0.044
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 93  TSMAEISWPWQYNFPPLLYVSKS 161
           T+ +   WPWQY+FPP   + KS
Sbjct: 6   TTASAFKWPWQYDFPPFFTIQKS 28


>Z81107-11|CAJ90502.1|  476|Caenorhabditis elegans Hypothetical
           protein R07H5.2b protein.
          Length = 476

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = +1

Query: 217 KQCKYINEGNVHIVLXVVGTDYVLRLIKQDGQQINVNDVRXSXNFV 354
           K   Y++    H V    G  Y +R+   DG+ ++  DV  S  ++
Sbjct: 54  KDMLYLDASQKHFVAFYKGHPYAVRIFDDDGKLLDAEDVHASLAWI 99


>Z81107-10|CAB03233.1|  646|Caenorhabditis elegans Hypothetical
           protein R07H5.2a protein.
          Length = 646

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = +1

Query: 217 KQCKYINEGNVHIVLXVVGTDYVLRLIKQDGQQINVNDVRXSXNFV 354
           K   Y++    H V    G  Y +R+   DG+ ++  DV  S  ++
Sbjct: 224 KDMLYLDASQKHFVAFYKGHPYAVRIFDDDGKLLDAEDVHASLAWI 269


>Z73103-12|CAJ90500.1|  476|Caenorhabditis elegans Hypothetical
           protein R07H5.2b protein.
          Length = 476

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = +1

Query: 217 KQCKYINEGNVHIVLXVVGTDYVLRLIKQDGQQINVNDVRXSXNFV 354
           K   Y++    H V    G  Y +R+   DG+ ++  DV  S  ++
Sbjct: 54  KDMLYLDASQKHFVAFYKGHPYAVRIFDDDGKLLDAEDVHASLAWI 99


>Z73103-11|CAA97431.1|  646|Caenorhabditis elegans Hypothetical
           protein R07H5.2a protein.
          Length = 646

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = +1

Query: 217 KQCKYINEGNVHIVLXVVGTDYVLRLIKQDGQQINVNDVRXSXNFV 354
           K   Y++    H V    G  Y +R+   DG+ ++  DV  S  ++
Sbjct: 224 KDMLYLDASQKHFVAFYKGHPYAVRIFDDDGKLLDAEDVHASLAWI 269


>Z71177-4|CAA94870.1|  529|Caenorhabditis elegans Hypothetical
           protein AC3.7 protein.
          Length = 529

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = +1

Query: 445 HALYHIRPTHRHFKSILSQYAIXAPNLALVSPLCETNYCVE 567
           H   +I P H   KS+ S YAI  P+L    P   T +  E
Sbjct: 159 HLKLNIIPMHSSTKSLPSVYAIGEPSLLNFLPSMRTKFGTE 199


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,783,977
Number of Sequences: 27780
Number of extensions: 264134
Number of successful extensions: 626
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)