Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_M12
(653 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1324 - 25825153-25825197,25825705-25825785,25825907-258259... 165 4e-41
06_01_0718 + 5233030-5233062,5233329-5233383,5233543-5233660,523... 149 2e-36
04_01_0026 - 354855-354876,355184-355248,355710-355817,356215-35... 149 2e-36
02_05_0942 + 32970537-32970581,32971059-32971113,32971300-329714... 148 3e-36
08_01_0066 - 455589-455687,455902-455976,456531-456677,457158-45... 142 2e-34
06_01_0067 + 561910-561987,562698-562759,564293-564338,564701-56... 100 1e-21
08_02_0034 - 11435678-11435702,11435787-11435816,11436364-114365... 99 4e-21
11_03_0227 + 11934530-11934638,11937206-11937351,11937492-119376... 85 5e-17
03_01_0215 + 1696250-1696573,1697653-1697793,1698267-1698539,169... 81 1e-15
12_01_0813 + 7475591-7475693,7476972-7477117,7477205-7477324,747... 78 7e-15
04_04_1543 - 34270578-34270718,34271069-34271341,34271782-342719... 77 2e-14
08_01_0130 + 1040696-1041049,1042135-1042275,1042422-1042673,104... 55 4e-08
07_03_0057 + 12872946-12873152,12873371-12873421,12876335-128764... 35 0.049
11_03_0215 + 11809068-11809300,11809872-11809964,11810976-118111... 32 0.46
05_06_0027 - 25029725-25030017,25030097-25030211,25030347-250305... 31 1.1
11_08_0091 - 28303446-28303732,28303825-28304297,28304383-283045... 29 2.4
09_02_0580 + 10884012-10884081,10884173-10884419,10884472-108847... 29 2.4
01_05_0027 - 17331888-17331968,17332236-17332806,17333190-173333... 29 2.4
08_02_0259 - 14974526-14974572,14974670-14974742,14974829-149748... 29 3.2
08_02_1359 + 26382605-26382815,26382907-26382998,26383722-263837... 28 5.6
06_03_0933 + 26067109-26067232,26067334-26067486,26068929-260692... 28 5.6
06_01_0785 - 5873244-5873357,5873458-5873562,5874333-5874424,587... 28 5.6
12_01_0797 + 7300370-7300506,7300682-7300798,7301903-7302443,730... 28 7.5
07_01_0353 + 2563807-2564496,2564595-2564660,2564853-2564918,256... 28 7.5
01_06_0270 + 28048449-28048577,28048915-28048978,28049537-280496... 27 9.9
>07_03_1324 -
25825153-25825197,25825705-25825785,25825907-25825967,
25826005-25826060,25826171-25826239,25826366-25826473,
25826555-25826635,25826795-25826951,25827060-25827177,
25827285-25827339,25827779-25827814
Length = 288
Score = 165 bits (400), Expect = 4e-41
Identities = 83/183 (45%), Positives = 126/183 (68%), Gaps = 4/183 (2%)
Frame = +3
Query: 117 KKPIVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGEL 296
K +V+VLGGPGSGKGTQC IV +GFTHLS GDLLRAE+KSGSE + +++ G++
Sbjct: 23 KVTVVFVLGGPGSGKGTQCANIVEHFGFTHLSAGDLLRAEIKSGSENGTMIENMIKEGKI 82
Query: 297 VPNEIVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEENIAPVS--VIIYFEASSET 470
VP+E+ + LL++A++ E+ FLIDG+PR + AF EN+ +S +++F+ S E
Sbjct: 83 VPSEVTIKLLQDAMI--KNENDKFLIDGFPRNEENRAAF-ENVTKISPAFVLFFDCSEEE 139
Query: 471 LTQRLLGRAASSGRADDNEETIKLRLKTFLXNNDLVLAQY--PDKLXRINAERPVDEIFA 644
+ +RLLGR + GR DDN ETI+ R K F+ ++ V+ Y +K+ +I+A +P+ E+F
Sbjct: 140 MERRLLGR--NQGRVDDNIETIRKRFKVFVESSLPVIEHYNAKNKVKKIDAAKPISEVFE 197
Query: 645 EVQ 653
+V+
Sbjct: 198 DVK 200
>06_01_0718 +
5233030-5233062,5233329-5233383,5233543-5233660,
5233746-5233902,5234033-5234113,5234213-5234320,
5234448-5234483
Length = 195
Score = 149 bits (361), Expect = 2e-36
Identities = 75/163 (46%), Positives = 109/163 (66%), Gaps = 2/163 (1%)
Frame = +3
Query: 117 KKPIVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGEL 296
K I++VLGGPGSGKGTQC IV +GF HLS G+LLRAE+ SGSE + I+ G++
Sbjct: 22 KVKIIFVLGGPGSGKGTQCSNIVEHFGFIHLSAGELLRAEINSGSENGTMIDTIITEGKI 81
Query: 297 VPNEIVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEE--NIAPVSVIIYFEASSET 470
VP+EI + LL+EAI+ + ++IDG+PR + + FE +I+P +++F+ S E
Sbjct: 82 VPSEITIKLLQEAIIKGGNDK--YIIDGFPRNEENRVVFESVISISP-EFVLFFDCSEEE 138
Query: 471 LTQRLLGRAASSGRADDNEETIKLRLKTFLXNNDLVLAQYPDK 599
+ +RLLGR + GR+DDN ETI+ RLK F+ ++ V+ Y K
Sbjct: 139 MERRLLGR--NQGRSDDNIETIRKRLKVFVESSLPVIEYYESK 179
>04_01_0026 -
354855-354876,355184-355248,355710-355817,356215-356295,
356729-356885,356990-357107,357485-357533,357806-357901
Length = 231
Score = 149 bits (361), Expect = 2e-36
Identities = 81/185 (43%), Positives = 120/185 (64%), Gaps = 4/185 (2%)
Frame = +3
Query: 108 DTSKKP-IVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIME 284
D + KP I +VLGGPGSGKGTQC +I + +GF HLS GDLLR+E+ +G E+ + + I++
Sbjct: 37 DGATKPFIAFVLGGPGSGKGTQCVRIASDFGFAHLSAGDLLRSEISTGGEKGELILNIIK 96
Query: 285 RGELVPNEIVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEE-NIAPVSVIIYFEAS 461
G++VP+EI ++L+++A+ + ++K LIDG+PR + IAFE ++I+F+
Sbjct: 97 EGKIVPSEITVELIRKAM--ESSDAKRVLIDGFPRCEENRIAFERITGTEPDLVIFFDCP 154
Query: 462 SETLTQRLLGRAASSGRADDNEETIKLRLKTFLXNNDLVLAQYPD--KLXRINAERPVDE 635
+ + +RLLGR + GR DDN ETIK RLK F N V+ Y K+ +INA +E
Sbjct: 155 EDEMVKRLLGR--NQGRVDDNIETIKKRLKVFESLNIPVVDYYTSRGKVHKINATGTEEE 212
Query: 636 IFAEV 650
IF V
Sbjct: 213 IFGAV 217
>02_05_0942 +
32970537-32970581,32971059-32971113,32971300-32971417,
32971567-32971615,32971637-32971723,32971890-32971970,
32972074-32972181,32972432-32972503,32973218-32973250
Length = 215
Score = 148 bits (359), Expect = 3e-36
Identities = 81/183 (44%), Positives = 118/183 (64%), Gaps = 4/183 (2%)
Frame = +3
Query: 117 KKPIVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGEL 296
K +V+VLGGPGSGKGTQC IV +GF HLS GDLLRAE+KSGSE + +++ G++
Sbjct: 26 KVTVVFVLGGPGSGKGTQCANIVEHFGFIHLSAGDLLRAEIKSGSENGTMIENMIKEGKI 85
Query: 297 VPNEIVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEE--NIAPVSVIIYFEASSET 470
VP+E EA++ + FLIDG+PR + AFE I P + +++F+ S E
Sbjct: 86 VPSE-------EAMIKSGNDK--FLIDGFPRNEENRAAFENVTKITP-AFVLFFDCSEEE 135
Query: 471 LTQRLLGRAASSGRADDNEETIKLRLKTFLXNNDLVLAQY--PDKLXRINAERPVDEIFA 644
+ +RLLGR + GR DDN ETI+ R K F+ ++ V+ Y DK+ +I+A +P+ E+F
Sbjct: 136 MERRLLGR--NQGRVDDNIETIRKRFKVFVESSLPVIEYYNAKDKVKKIDAAKPIPEVFE 193
Query: 645 EVQ 653
+V+
Sbjct: 194 DVK 196
>08_01_0066 -
455589-455687,455902-455976,456531-456677,457158-457292,
457380-457508,457719-457814,458212-458403
Length = 290
Score = 142 bits (344), Expect = 2e-34
Identities = 79/198 (39%), Positives = 115/198 (58%), Gaps = 24/198 (12%)
Frame = +3
Query: 129 VWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVPNE 308
V + G P SGKGTQC+ I +KYG H+S GDLLRAE+ +GSE K ME+G+LVP+E
Sbjct: 76 VMIAGAPASGKGTQCELIKSKYGLVHISAGDLLRAEIAAGSENGKRAKEFMEKGQLVPDE 135
Query: 309 IVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEE-NIAPVSVIIYFEASSETLTQRL 485
IV++++KE +L + KG+L+DGYPR SQ +A E NI P + I + E L +R+
Sbjct: 136 IVVNMVKERLLQPDAQEKGWLLDGYPRSYSQAMALETLNIRP-DIFILLDVPDELLVERV 194
Query: 486 LGR-----------------------AASSGRADDNEETIKLRLKTFLXNNDLVLAQYPD 596
+GR + + R DD EE +KLRL+T N + +L+ Y D
Sbjct: 195 VGRRLDPVTGKIYHLKYSPPENEEIASRLTQRFDDTEEKVKLRLQTHYQNVESLLSIYED 254
Query: 597 KLXRINAERPVDEIFAEV 650
+ + + VD++FAE+
Sbjct: 255 VIVEVKGDALVDDVFAEI 272
>06_01_0067 +
561910-561987,562698-562759,564293-564338,564701-564758,
564892-565009,565130-565286,565611-565718,565884-565955,
566058-566174,566309-566404
Length = 303
Score = 100 bits (239), Expect = 1e-21
Identities = 49/105 (46%), Positives = 70/105 (66%)
Frame = +3
Query: 102 PIDTSKKPIVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIM 281
P K IV+V+GGPGSGKGTQC KIV ++GFTHLS GDLLR E K +E+ + +M
Sbjct: 69 PPPGKKITIVFVIGGPGSGKGTQCAKIVKQFGFTHLSAGDLLREEAKYDTEQGTMIKNLM 128
Query: 282 ERGELVPNEIVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFE 416
G+LV +++++ LL +A+ R + FL+DG+PR + A+E
Sbjct: 129 NEGKLVSSDLIVKLLFKAM--RESGNDKFLVDGFPRNEENRHAYE 171
>08_02_0034 -
11435678-11435702,11435787-11435816,11436364-11436501,
11436646-11436755,11436838-11436867,11437948-11437993,
11438453-11438622,11439156-11439221,11439299-11439378,
11440704-11440842,11440933-11441013,11441112-11441147,
11441414-11441539,11442084-11442179,11443615-11443689,
11444288-11444434,11445155-11445229,11445485-11445619,
11445706-11445834,11446161-11446292,11446395-11446598
Length = 689
Score = 98.7 bits (235), Expect = 4e-21
Identities = 48/109 (44%), Positives = 64/109 (58%)
Frame = +3
Query: 129 VWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVPNE 308
V + G P SGKGTQC IV KYG H+STGDLLRAEV SG+E K M+ G LVP++
Sbjct: 92 VMISGAPASGKGTQCRMIVEKYGLVHISTGDLLRAEVSSGTEIGKKAKEYMDNGMLVPDQ 151
Query: 309 IVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEENIAPVSVIIYFE 455
+V D++ + +G+L+DGYPR +Q + E + I E
Sbjct: 152 VVTDMVVSRLSQPDVRERGWLLDGYPRSYAQAQSLESMKIRPDIFIVLE 200
Score = 31.1 bits (67), Expect = 0.80
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 510 RADDNEETIKLRLKTFLXNNDLVLAQYPDKLXRI 611
R+DD E +K RL T+ N++ V+ Y D L ++
Sbjct: 267 RSDDTFEKVKSRLDTYKQNSEAVIPTYSDLLNQV 300
>11_03_0227 +
11934530-11934638,11937206-11937351,11937492-11937611,
11937731-11937898,11938534-11938623,11938920-11939018
Length = 243
Score = 85.0 bits (201), Expect = 5e-17
Identities = 65/206 (31%), Positives = 101/206 (49%), Gaps = 33/206 (16%)
Frame = +3
Query: 135 VLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVPNEIV 314
++G PGSGKGTQ I +Y HL+TGD+LRA V + + M++GELV +++V
Sbjct: 35 LVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGVKAKEAMDKGELVSDDLV 94
Query: 315 LDLLKEAILARAEESKGFLIDGYPREKSQGIAFEENI----APVSVIIYFEASSETLTQR 482
+ ++ EA + + KGF++DG+PR Q +E + V ++ F L +R
Sbjct: 95 VGIIDEA-MKKPSCQKGFILDGFPRTVVQAQKLDEMLEKKGTKVDKVLNFAIDDSILEER 153
Query: 483 LLGR--AASSGRA-------------------------DDNEETIKLRLKTFLXNNDLVL 581
+ GR SSGR+ DD E +K RL+ F + V+
Sbjct: 154 ITGRWIHPSSGRSYHTKFAPPKVPGVDDVTGEPLIQRKDDTAEVLKSRLEAFHKQTEPVI 213
Query: 582 AQYPDK--LXRINAERPVDEIFAEVQ 653
Y K + ++AE+P E+ AEVQ
Sbjct: 214 DYYSKKALVANLHAEKPPKEVTAEVQ 239
>03_01_0215 +
1696250-1696573,1697653-1697793,1698267-1698539,
1698755-1698814,1698890-1699033
Length = 313
Score = 80.6 bits (190), Expect = 1e-15
Identities = 40/128 (31%), Positives = 74/128 (57%), Gaps = 2/128 (1%)
Frame = +3
Query: 117 KKPIVWV-LGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGE 293
++ + WV LG PG GKGT ++ G H++TGDL+R E+ S + L I+ +G+
Sbjct: 58 ERNVQWVFLGCPGVGKGTYASRLSRLLGVPHIATGDLVRDELASSGPLSVQLAEIVNQGK 117
Query: 294 LVPNEIVLDLLKEAILARAEESK-GFLIDGYPREKSQGIAFEENIAPVSVIIYFEASSET 470
LV +EI+++LL + + E+ + GF++DG+PR Q + + + +++ + +
Sbjct: 118 LVSDEIIINLLSKRLKKGEEQGESGFILDGFPRTVKQA-EILDGVTDIDMVVNLKLREDV 176
Query: 471 LTQRLLGR 494
L ++ LGR
Sbjct: 177 LVEKCLGR 184
>12_01_0813 +
7475591-7475693,7476972-7477117,7477205-7477324,
7477445-7477612,7478252-7478341,7478941-7479039
Length = 241
Score = 77.8 bits (183), Expect = 7e-15
Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 33/208 (15%)
Frame = +3
Query: 129 VWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVPNE 308
V ++G PG GKGTQ I ++ HL+TGD+LRA V + + M++GELV ++
Sbjct: 31 VILVGPPGCGKGTQSPLIKDEFCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDD 90
Query: 309 IVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEENIA----PVSVIIYFEASSETLT 476
+V+ ++ EA + + KGF++DG+PR Q +E +A + ++ F L
Sbjct: 91 LVVGIIDEA-MKKTSCQKGFILDGFPRTVVQAQKLDEMLAKQGTKIDKVLNFAIDDAILE 149
Query: 477 QRLLGR--AASSGRA-------------------------DDNEETIKLRLKTFLXNNDL 575
+R+ GR SSGR+ DD +K RL+ F
Sbjct: 150 ERITGRWIHPSSGRSYHTKFAPPKTPGLDDVTGEPLIQRKDDTAAVLKSRLEAFHVQTKP 209
Query: 576 VLAQYPDK--LXRINAERPVDEIFAEVQ 653
V+ Y K + ++AE+P E+ EVQ
Sbjct: 210 VIDYYTKKGIVANLHAEKPPKEVTVEVQ 237
>04_04_1543 -
34270578-34270718,34271069-34271341,34271782-34271922,
34272365-34272667
Length = 285
Score = 76.6 bits (180), Expect = 2e-14
Identities = 43/129 (33%), Positives = 71/129 (55%), Gaps = 2/129 (1%)
Frame = +3
Query: 126 IVWV-LGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVP 302
+ WV LG PG GKGT ++ H++TGDL+R + S ++ L I+ G+LV
Sbjct: 54 VQWVFLGCPGVGKGTYASRLSQMLRVPHIATGDLVRDALASPGPFSEQLAEIVNNGKLVS 113
Query: 303 NEIVLDLLKEAILARAEESK-GFLIDGYPREKSQGIAFEENIAPVSVIIYFEASSETLTQ 479
+EI+++LL + + AE+ + GF++DG+PR Q E + + ++I + E L
Sbjct: 114 DEIIINLLSKRLEEGAEKGELGFILDGFPRTIRQA-EILEGVTDIDLVINLKLREEALLA 172
Query: 480 RLLGRAASS 506
+ LGR S
Sbjct: 173 KCLGRRMCS 181
>08_01_0130 +
1040696-1041049,1042135-1042275,1042422-1042673,
1043797-1043904,1044289-1044593,1044720-1044841,
1044979-1045225,1045308-1045365,1045414-1045530,
1045718-1045753,1046492-1046554,1046958-1047047,
1047241-1047399,1047475-1047596,1048145-1048217,
1048307-1048375
Length = 771
Score = 55.2 bits (127), Expect = 4e-08
Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Frame = +3
Query: 135 VLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVPNEIV 314
V+G PG K ++ ++S G L+R E+ S K + + G+LVP +I+
Sbjct: 75 VMGRPGPQKHAHAARLAEVLAVPYISMGTLVRQELSPASSLYKKIANSVNEGKLVPEDII 134
Query: 315 LDLLKEAILARAEESK-GFLIDGYPREKSQGIAFEENIAPVSVIIYFEASSETLTQRLLG 491
LL + + + + GF++DG PR Q +E I + +++ F+ + +R G
Sbjct: 135 FGLLTKRLEEGYNKGETGFILDGIPRTHMQAEILDE-IVDIDLVLNFKCADNCFMKRRFG 193
>07_03_0057 +
12872946-12873152,12873371-12873421,12876335-12876480,
12876567-12876756
Length = 197
Score = 35.1 bits (77), Expect = 0.049
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 120 KPIVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLR 230
+P V V G PG+GK T C + H++ GDL+R
Sbjct: 12 RPNVLVTGTPGTGKTTTCSLLADAVDLRHINIGDLVR 48
>11_03_0215 +
11809068-11809300,11809872-11809964,11810976-11811193,
11812780-11812832,11813411-11813527,11814817-11814908,
11815672-11815758,11816625-11816742
Length = 336
Score = 31.9 bits (69), Expect = 0.46
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +3
Query: 96 MAPIDTSKKPIVWVLGGPGSGKGTQCDKIVAKYGFT 203
MA ++ + P+V V+G GSGK TQ +I+ + G+T
Sbjct: 25 MAAVEAN--PVVVVIGETGSGKSTQLSQILHRRGYT 58
>05_06_0027 -
25029725-25030017,25030097-25030211,25030347-25030504,
25030582-25030682,25030846-25030994,25031089-25031239,
25031329-25031482,25032249-25032321,25032446-25032676
Length = 474
Score = 30.7 bits (66), Expect = 1.1
Identities = 31/123 (25%), Positives = 47/123 (38%), Gaps = 4/123 (3%)
Frame = +3
Query: 63 RILRQLLIL*KMAPIDTSKKPIVWVLGGPGSGKGTQCDKIVAKY---GF-THLSTGDLLR 230
RI++Q + +D K G P SGK T C K + GF L D R
Sbjct: 73 RIIQQAVFAELCNMLDPGKPSFTPTKGKPSSGKTTTCTKYAHYHQLKGFKPSLVCADTFR 132
Query: 231 AEVKSGSERAKCLTAIMERGELVPNEIVLDLLKEAILARAEESKGFLIDGYPREKSQGIA 410
A ++ I G + ++ V ++ R E+S ++D R K +
Sbjct: 133 AGAFDQLKQNATKAKIPYYGSYMESDPVKIAVEGVERFRKEKSDLIIVDTSGRHKQEAAL 192
Query: 411 FEE 419
FEE
Sbjct: 193 FEE 195
>11_08_0091 -
28303446-28303732,28303825-28304297,28304383-28304574,
28304688-28304986,28305086-28305121
Length = 428
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +3
Query: 126 IVWVLGGPGSGKGTQCDKIVAKYGFT--HLSTGDL 224
I+ + GG G GK QC+ + AK G +S G+L
Sbjct: 151 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 185
>09_02_0580 +
10884012-10884081,10884173-10884419,10884472-10884735,
10885630-10886093,10888326-10888396
Length = 371
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +2
Query: 77 AFNFIKNGTHRYIEKANRVGPGRSRIRKGNTMRQDRRQIRVHSPLDWR 220
A N I++ + R +++ N +GP +SRI + DRR +R+ W+
Sbjct: 168 ALNAIQSQSMRLVQRTN-MGPSKSRILRYPDDPYDRRWLRMQLDRTWK 214
>01_05_0027 -
17331888-17331968,17332236-17332806,17333190-17333335,
17333412-17333459
Length = 281
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +2
Query: 104 HRYIEKANRVGPGRSRIRKGNTMRQDRRQIRVHSPLDWRPAQG*SQKRLGEG 259
HR + + + PGRSR+ + MR+ ++ RV S RP+ K G G
Sbjct: 177 HRVLSRLHTTDPGRSRLAR---MRKSWKKFRVGSARCCRPSMSRPSKLPGSG 225
>08_02_0259 -
14974526-14974572,14974670-14974742,14974829-14974891,
14975030-14975097,14975172-14975295,14976434-14976493,
14976744-14976806,14976902-14977942,14978027-14978093,
14978188-14978303,14978454-14978540,14978749-14978838,
14979128-14979214,14979366-14979428,14979509-14979566,
14980174-14980231,14980349-14980416,14980508-14980587,
14981084-14981147,14981321-14981392,14981517-14981576,
14982344-14982398,14982487-14982520,14983845-14983931,
14984036-14984122,14984211-14984408,14984509-14984639,
14984739-14984838
Length = 1066
Score = 29.1 bits (62), Expect = 3.2
Identities = 27/121 (22%), Positives = 55/121 (45%)
Frame = +3
Query: 126 IVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERAKCLTAIMERGELVPN 305
++ ++G GSGK TQ + + + G+T + G + + + + + E G + +
Sbjct: 435 VIVIVGETGSGKTTQIPQYLHEAGYT--AKGKVACTQPRRVAAMSVAARVSQEMGVKLGH 492
Query: 306 EIVLDLLKEAILARAEESKGFLIDGYPREKSQGIAFEENIAPVSVIIYFEASSETLTQRL 485
E+ + E + K ++ DG + G E ++A SV++ EA TL+ +
Sbjct: 493 EVGYSIRFEDCTSEKTLIK-YMTDGMLLREFLG---EPDLASYSVVMVDEAHERTLSTDI 548
Query: 486 L 488
L
Sbjct: 549 L 549
>08_02_1359 +
26382605-26382815,26382907-26382998,26383722-26383791,
26383895-26384013,26384580-26384676,26384781-26384860,
26384986-26385180,26385460-26385520,26386408-26386468,
26386900-26386993,26387085-26387157,26387158-26387270,
26387444-26387587
Length = 469
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +3
Query: 114 SKKP-IVWVLGGPGSGKGTQCDKIV 185
SK+P ++ V GG SGK T CD I+
Sbjct: 64 SKQPFVIGVSGGTASGKTTVCDMII 88
>06_03_0933 +
26067109-26067232,26067334-26067486,26068929-26069279,
26069375-26069451,26069665-26070982,26071948-26072009,
26072253-26072309
Length = 713
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = -1
Query: 281 HNSGKAFRPLRAAFDFSPEQVSSREVS---EPVFGDDL 177
HN G +FRP +A + Q+SS S EP+FGD+L
Sbjct: 532 HNDGTSFRPSQANI-ANINQLSSFAASSGQEPMFGDEL 568
>06_01_0785 -
5873244-5873357,5873458-5873562,5874333-5874424,
5874525-5874594,5875080-5875202,5875287-5875372,
5875547-5875648,5875874-5876096,5876217-5876282,
5876407-5876497,5876574-5876701,5877734-5877749,
5878171-5878318,5878440-5878511,5878586-5878690,
5879122-5879291,5880093-5880424
Length = 680
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 339 LARAEESKGFLIDGYPREKSQGIAFEENIAPVSVIIYFEASSETLTQRLLGRAAS 503
+A A + + I+G P EK + + +E+ PV +I E ++ TL Q G A S
Sbjct: 92 IALAGDGRLLWIEGRPEEKGRMVIVKEDDKPVDIIPQ-EFAARTLAQEYGGGAFS 145
>12_01_0797 + 7300370-7300506,7300682-7300798,7301903-7302443,
7302885-7304042,7304133-7304291,7304397-7304504,
7305045-7305304,7305936-7306101,7307025-7307050,
7307318-7307402,7307486-7307695,7308815-7308872,
7308964-7309037,7309323-7309373,7309576-7309664,
7310027-7310104,7310164-7310269
Length = 1140
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/38 (28%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 110 YIEKANRVGPGRSRIRKGNTMRQDRRQIRVHSPL-DWR 220
++EK P + R+ GN M +++ Q ++H + +WR
Sbjct: 924 FVEKEKYELPSKCRLHPGNDMFREQEQHKIHFDINEWR 961
>07_01_0353 +
2563807-2564496,2564595-2564660,2564853-2564918,
2565044-2565115,2565196-2565261,2565355-2565417,
2565505-2565570,2565963-2566062,2567403-2567504,
2567772-2567995,2568200-2568314,2568653-2568763,
2568873-2569088,2569426-2569624,2570690-2570790,
2570872-2570919,2571052-2571236,2571345-2571462,
2571572-2571699,2571981-2572107,2572529-2572647,
2572770-2572938,2573078-2573162,2573247-2573320,
2573449-2573568,2574068-2574251,2574343-2574464,
2574548-2574755,2574885-2574958,2575047-2575185,
2575275-2575456,2575852-2576007,2576153-2576284,
2576508-2576566,2576913-2576945,2577065-2577196,
2577303-2577479
Length = 1675
Score = 27.9 bits (59), Expect = 7.5
Identities = 24/87 (27%), Positives = 44/87 (50%)
Frame = +1
Query: 169 NATRSSPNTGSLTSRLETCSGLKSKAARRGRNALPLLWKEASLSLMKSSWIC*KKRSWPV 348
NAT +SP + S+TS + G ++ + +G +++P+ K ++ S ++ P
Sbjct: 168 NATLNSPRSPSVTSSVTKKVGSRTSSMDKG-SSMPIRKKSSTADSRDSRFM-----MLPQ 221
Query: 349 LKNPKASSSTATLARSHRVSLLKRTSL 429
+ + KAS +R HRV LK+ L
Sbjct: 222 V-DLKASDEVRLDSRGHRVRTLKQLRL 247
>01_06_0270 +
28048449-28048577,28048915-28048978,28049537-28049638,
28049971-28050021,28050075-28050172,28050395-28050485,
28050718-28050782,28050913-28051107,28051207-28051326,
28051592-28051662,28051787-28052012,28052330-28052407,
28052507-28052735,28052958-28053097,28053571-28053699
Length = 595
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +3
Query: 123 PIVWVLGGPGSGKGTQCDKIVAKYGFTHLSTGDLLRAEVKSGSERA 260
P + V+GG SGK + + +V K S L+R E+ +ERA
Sbjct: 35 PAIAVVGGQSSGKSSVLESVVGKDFLPRGSA--LVRKEIADETERA 78
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,815,199
Number of Sequences: 37544
Number of extensions: 352287
Number of successful extensions: 1027
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -