Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_M08
(458 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VZS3 Cluster: Protein translation factor SUI1 homolog... 164 7e-40
UniRef50_P41567 Cluster: Eukaryotic translation initiation facto... 122 5e-27
UniRef50_O60739 Cluster: Eukaryotic translation initiation facto... 122 5e-27
UniRef50_UPI0000DD7914 Cluster: PREDICTED: similar to suppressor... 118 8e-26
UniRef50_Q6MVC9 Cluster: Probable translation initiation factor ... 100 1e-20
UniRef50_A6SQI8 Cluster: Translation initiation factor 3; n=15; ... 100 1e-20
UniRef50_Q94JV4 Cluster: Protein translation factor SUI1 homolog... 96 3e-19
UniRef50_Q5CLR9 Cluster: Translation initiation factor SUI1; n=2... 92 6e-18
UniRef50_Q38LF1 Cluster: Eukaryotic translation initiation facto... 90 2e-17
UniRef50_Q00T99 Cluster: Translation initiation factor SUI1, put... 87 1e-16
UniRef50_Q00RG6 Cluster: H0303G06.6 protein; n=2; Oryza sativa|R... 85 5e-16
UniRef50_Q7XN79 Cluster: OSJNBa0089N06.3 protein; n=6; Oryza sat... 82 6e-15
UniRef50_Q86AU4 Cluster: Similar to translation initiation facto... 81 9e-15
UniRef50_Q5KLG3 Cluster: Suppressor of initiator codon mutations... 76 4e-13
UniRef50_Q4QAL1 Cluster: Translation factor SUI1, putative; n=5;... 69 6e-11
UniRef50_UPI000150A7AF Cluster: Translation initiation factor SU... 63 3e-09
UniRef50_A7ES43 Cluster: Predicted protein; n=1; Sclerotinia scl... 56 4e-07
UniRef50_UPI0000498D7F Cluster: Translation initiation factor; n... 52 5e-06
UniRef50_A0CXT2 Cluster: Chromosome undetermined scaffold_30, wh... 52 8e-06
UniRef50_Q40537 Cluster: Nicotiana tabacum (clone 12) activating... 50 2e-05
UniRef50_A2DSB0 Cluster: Translation initiation factor SUI1 fami... 47 2e-04
UniRef50_Q98S27 Cluster: Translation factor sui1 homolog; n=1; G... 44 0.002
UniRef50_Q5UQD7 Cluster: Protein translation factor SUI1 homolog... 41 0.015
UniRef50_Q00YW3 Cluster: Density-regulated protein related to tr... 37 0.18
UniRef50_A0E5U0 Cluster: Chromosome undetermined scaffold_8, who... 37 0.18
UniRef50_A1RXI2 Cluster: Translation initiation factor SUI1; n=1... 37 0.24
UniRef50_Q7R4J9 Cluster: GLP_49_44768_45085; n=1; Giardia lambli... 36 0.56
UniRef50_A7Q7W8 Cluster: Chromosome chr18 scaffold_61, whole gen... 34 1.7
UniRef50_A1C8E3 Cluster: RNA binding protein Tma22, putative; n=... 34 1.7
UniRef50_Q9LQ55 Cluster: Dynamin-2B; n=25; Magnoliophyta|Rep: Dy... 33 2.2
UniRef50_Q5WNX0 Cluster: BcrA; n=7; Firmicutes|Rep: BcrA - Enter... 32 5.2
UniRef50_Q5CQN1 Cluster: Putative uncharacterized protein; n=2; ... 32 5.2
UniRef50_Q54DM6 Cluster: Putative uncharacterized protein; n=1; ... 32 5.2
UniRef50_Q03SW1 Cluster: Predicted membrane protein; n=1; Lactob... 32 6.8
UniRef50_O04659 Cluster: A_TM021B04.2 protein; n=2; Eukaryota|Re... 32 6.8
UniRef50_Q93834 Cluster: UPF0392 protein F59C6.8; n=2; Caenorhab... 32 6.8
UniRef50_A4BNS2 Cluster: A protein; n=2; Nitrococcus mobilis Nb-... 31 9.0
UniRef50_A0YLQ7 Cluster: Putative uncharacterized protein; n=1; ... 31 9.0
UniRef50_Q9LNV2 Cluster: F22G5.33; n=2; Arabidopsis thaliana|Rep... 31 9.0
UniRef50_Q61PF6 Cluster: Putative uncharacterized protein CBG075... 31 9.0
UniRef50_Q5V177 Cluster: Structural maintenance of chromosomes; ... 31 9.0
>UniRef50_Q9VZS3 Cluster: Protein translation factor SUI1 homolog;
n=11; Bilateria|Rep: Protein translation factor SUI1
homolog - Drosophila melanogaster (Fruit fly)
Length = 110
Score = 164 bits (399), Expect = 7e-40
Identities = 74/84 (88%), Positives = 81/84 (96%)
Frame = +2
Query: 167 MSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRAC 346
MSIQNLNT DPFADAIK ++DD+QDGLVH+RIQQRNGRKTLTTVQGLS+EYDLKKIVR+C
Sbjct: 1 MSIQNLNTRDPFADAIKGNDDDIQDGLVHIRIQQRNGRKTLTTVQGLSAEYDLKKIVRSC 60
Query: 347 XKEFACNGTVVEHPEYGEVLQLQG 418
KEFACNGTV+EHPEYGEVLQLQG
Sbjct: 61 KKEFACNGTVIEHPEYGEVLQLQG 84
>UniRef50_P41567 Cluster: Eukaryotic translation initiation factor
1; n=53; Eukaryota|Rep: Eukaryotic translation
initiation factor 1 - Homo sapiens (Human)
Length = 113
Score = 122 bits (293), Expect = 5e-27
Identities = 55/85 (64%), Positives = 70/85 (82%), Gaps = 2/85 (2%)
Frame = +2
Query: 170 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 343
+IQNL++FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +YD KK+V+A
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKA 62
Query: 344 CXKEFACNGTVVEHPEYGEVLQLQG 418
K+FACNGTV+EHPEYGEV+QLQG
Sbjct: 63 FKKKFACNGTVIEHPEYGEVIQLQG 87
>UniRef50_O60739 Cluster: Eukaryotic translation initiation factor
1b; n=44; Fungi/Metazoa group|Rep: Eukaryotic
translation initiation factor 1b - Homo sapiens (Human)
Length = 113
Score = 122 bits (293), Expect = 5e-27
Identities = 55/85 (64%), Positives = 69/85 (81%), Gaps = 2/85 (2%)
Frame = +2
Query: 170 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRA 343
+IQNL +FDPFADA K + + +H+RIQQRNGRKTLTTVQG++ +YD KK+V+A
Sbjct: 3 TIQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKA 62
Query: 344 CXKEFACNGTVVEHPEYGEVLQLQG 418
K+FACNGTV+EHPEYGEV+QLQG
Sbjct: 63 FKKKFACNGTVIEHPEYGEVIQLQG 87
>UniRef50_UPI0000DD7914 Cluster: PREDICTED: similar to suppressor of
initiator codon mutations, related sequence 1; n=1; Homo
sapiens|Rep: PREDICTED: similar to suppressor of
initiator codon mutations, related sequence 1 - Homo
sapiens
Length = 288
Score = 118 bits (283), Expect = 8e-26
Identities = 56/99 (56%), Positives = 78/99 (78%), Gaps = 2/99 (2%)
Frame = +2
Query: 128 SVSLKQRDPTFNRMSIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRKTLTTVQ 301
+VS ++++ ++ + +IQNL++FDPFADA K + + +H+RIQQRNGRKTLTTVQ
Sbjct: 166 AVSTEEKE-SYCKFAIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQ 224
Query: 302 GLSSEYDLKKIVRACXKEFACNGTVVEHPEYGEVLQLQG 418
G++ +YD KK+V+A K FACNGTV+EHPEYGEV+Q QG
Sbjct: 225 GIADDYDKKKLVKA-FKNFACNGTVIEHPEYGEVIQPQG 262
>UniRef50_Q6MVC9 Cluster: Probable translation initiation factor
SUI1; n=2; Neurospora crassa|Rep: Probable translation
initiation factor SUI1 - Neurospora crassa
Length = 117
Score = 100 bits (240), Expect = 1e-20
Identities = 48/88 (54%), Positives = 65/88 (73%), Gaps = 4/88 (4%)
Frame = +2
Query: 167 MSIQNLNTFDPFADAIK--SSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVR 340
MSI+NL T+DPFA+A + S + +H+RIQQRNGRKTLTTVQG+ ++D KKI++
Sbjct: 1 MSIENLKTYDPFAEADEEDSGQTKQTQEYIHIRIQQRNGRKTLTTVQGIPKKFDAKKILK 60
Query: 341 ACXKEFACNGTVV--EHPEYGEVLQLQG 418
KEFACNGT++ E + G+V+QLQG
Sbjct: 61 VVKKEFACNGTIIGDEDSKMGDVIQLQG 88
>UniRef50_A6SQI8 Cluster: Translation initiation factor 3; n=15;
Pezizomycotina|Rep: Translation initiation factor 3 -
Botryotinia fuckeliana B05.10
Length = 169
Score = 100 bits (240), Expect = 1e-20
Identities = 46/82 (56%), Positives = 59/82 (71%)
Frame = +2
Query: 173 IQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACXK 352
I+NL FDPFA+A + D +H+RIQQRNGRKTLTTVQGL ++D KKI++ K
Sbjct: 60 IENLKVFDPFAEADEEPGDQKAAEYIHIRIQQRNGRKTLTTVQGLPKKFDQKKILKVIKK 119
Query: 353 EFACNGTVVEHPEYGEVLQLQG 418
+FACNGT+V G+V+QLQG
Sbjct: 120 KFACNGTIVNDVIMGDVIQLQG 141
>UniRef50_Q94JV4 Cluster: Protein translation factor SUI1 homolog 2;
n=42; Eukaryota|Rep: Protein translation factor SUI1
homolog 2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 113
Score = 96.3 bits (229), Expect = 3e-19
Identities = 45/84 (53%), Positives = 55/84 (65%)
Frame = +2
Query: 167 MSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRAC 346
+ +Q FDPFADA VH+R+QQRNGRK+LTTVQGL EY KI++
Sbjct: 4 LEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKILKDL 63
Query: 347 XKEFACNGTVVEHPEYGEVLQLQG 418
KEF CNGTVV+ E G+V+QLQG
Sbjct: 64 KKEFCCNGTVVQDSELGQVIQLQG 87
>UniRef50_Q5CLR9 Cluster: Translation initiation factor SUI1; n=2;
Cryptosporidium|Rep: Translation initiation factor SUI1
- Cryptosporidium hominis
Length = 112
Score = 91.9 bits (218), Expect = 6e-18
Identities = 39/74 (52%), Positives = 55/74 (74%)
Frame = +2
Query: 197 PFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACXKEFACNGTV 376
PF S G VH+R QQRNG+K+LTTVQGLS+E+DLK++++A K F+CNGT+
Sbjct: 13 PFVVDALSEVGKSSSGYVHIRNQQRNGKKSLTTVQGLSAEFDLKRLLKAFKKNFSCNGTI 72
Query: 377 VEHPEYGEVLQLQG 418
++ PE+G +LQ+QG
Sbjct: 73 IDDPEHGPILQIQG 86
>UniRef50_Q38LF1 Cluster: Eukaryotic translation initiation factor
1; n=9; Apicomplexa|Rep: Eukaryotic translation
initiation factor 1 - Toxoplasma gondii
Length = 163
Score = 89.8 bits (213), Expect = 2e-17
Identities = 45/90 (50%), Positives = 59/90 (65%), Gaps = 6/90 (6%)
Frame = +2
Query: 167 MSIQNLNTFDPFADAIKS------SEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLK 328
+ IQN DPFA+ S + L ++R QQRNGRK++TTVQGL DLK
Sbjct: 48 LDIQNFGVSDPFANDTSQAGGAGGSSTHLIRKLRNIRNQQRNGRKSVTTVQGLDKSLDLK 107
Query: 329 KIVRACXKEFACNGTVVEHPEYGEVLQLQG 418
K+VRA K+F+CNGTV+E PE+G ++QLQG
Sbjct: 108 KMVRALKKQFSCNGTVIEDPEHGSIIQLQG 137
>UniRef50_Q00T99 Cluster: Translation initiation factor SUI1,
putative; n=1; Ostreococcus tauri|Rep: Translation
initiation factor SUI1, putative - Ostreococcus tauri
Length = 129
Score = 87.4 bits (207), Expect = 1e-16
Identities = 36/64 (56%), Positives = 51/64 (79%)
Frame = +2
Query: 227 DDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACXKEFACNGTVVEHPEYGEVL 406
D VQ +H+R+QQRNGRK+LTTVQGL+ + +LK +V+ C K+F CNG +VE E+G+++
Sbjct: 39 DSVQGNYIHIRMQQRNGRKSLTTVQGLNPKINLKLVVKECKKKFNCNGCIVEDSEHGDIV 98
Query: 407 QLQG 418
QLQG
Sbjct: 99 QLQG 102
>UniRef50_Q00RG6 Cluster: H0303G06.6 protein; n=2; Oryza sativa|Rep:
H0303G06.6 protein - Oryza sativa (Rice)
Length = 241
Score = 85.4 bits (202), Expect = 5e-16
Identities = 42/80 (52%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
Frame = +2
Query: 188 TFDPFADAI---KSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACXKEF 358
TFD FADA ++ VHVR+QQRNGRKTLTTVQG+ EY+ K++R +E
Sbjct: 136 TFDAFADAEGEDAAAGRGAGGDYVHVRVQQRNGRKTLTTVQGIGGEYNYAKVLRDLKREL 195
Query: 359 ACNGTVVEHPEYGEVLQLQG 418
CNG VVE E G+++QLQG
Sbjct: 196 CCNGNVVEDKELGKIIQLQG 215
>UniRef50_Q7XN79 Cluster: OSJNBa0089N06.3 protein; n=6; Oryza
sativa|Rep: OSJNBa0089N06.3 protein - Oryza sativa
(Rice)
Length = 580
Score = 81.8 bits (193), Expect = 6e-15
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +2
Query: 248 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACXKEFACNGTVVEHPEYGEVLQLQG 418
VHVR+QQRNGRKTLTTVQG+ EY+ K++R +E CNG VVE E G+++QLQG
Sbjct: 498 VHVRVQQRNGRKTLTTVQGIGGEYNYAKVLRDLKRELCCNGNVVEDKELGKIIQLQG 554
>UniRef50_Q86AU4 Cluster: Similar to translation initiation factor 3
(EIF3); Sui1p; n=2; Dictyostelium discoideum|Rep:
Similar to translation initiation factor 3 (EIF3); Sui1p
- Dictyostelium discoideum (Slime mold)
Length = 110
Score = 81.4 bits (192), Expect = 9e-15
Identities = 41/88 (46%), Positives = 55/88 (62%)
Frame = +2
Query: 170 SIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACX 349
SIQNLN+ DPFA+ D VH+RI QR+GRK +TTV+GL + DLKKI++
Sbjct: 3 SIQNLNSADPFAEDSNLGGDS-GISYVHIRIFQRSGRKAVTTVEGLPPKIDLKKILKHLK 61
Query: 350 KEFACNGTVVEHPEYGEVLQLQGRPARE 433
K CNG +VE G +++LQG +E
Sbjct: 62 KSLNCNGNIVEEENLGMIIKLQGDKRKE 89
>UniRef50_Q5KLG3 Cluster: Suppressor of initiator codon mutations,
putative; n=1; Filobasidiella neoformans|Rep: Suppressor
of initiator codon mutations, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 159
Score = 75.8 bits (178), Expect = 4e-13
Identities = 43/81 (53%), Positives = 56/81 (69%), Gaps = 8/81 (9%)
Frame = +2
Query: 173 IQNLN-TFDPFADA-----IKSSEDDV--QDGLVHVRIQQRNGRKTLTTVQGLSSEYDLK 328
++NL FDPFA S E V ++ +H+R+QQRNGRKTLTTVQG+ S+Y+
Sbjct: 26 VENLGPAFDPFAPVNDLNDTPSIEKAVGSKNDKIHIRLQQRNGRKTLTTVQGIPSKYNHS 85
Query: 329 KIVRACXKEFACNGTVVEHPE 391
KI++A KEFACNGTVV+ PE
Sbjct: 86 KILKAMKKEFACNGTVVK-PE 105
>UniRef50_Q4QAL1 Cluster: Translation factor SUI1, putative; n=5;
Trypanosomatidae|Rep: Translation factor SUI1, putative
- Leishmania major
Length = 107
Score = 68.5 bits (160), Expect = 6e-11
Identities = 32/79 (40%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Frame = +2
Query: 185 NTFDPFADAIKSSEDDVQDGL-VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACXKEFA 361
+T + + + +E V G VH+R+QQR G+K +TTVQGL+ + + ++I R + +
Sbjct: 3 DTVEAIVNQQRETERAVLGGQKVHIRVQQRKGKKFVTTVQGLNQKLNFRRINREFQRRWG 62
Query: 362 CNGTVVEHPEYGEVLQLQG 418
CNGTV+ P+ G V+QLQG
Sbjct: 63 CNGTVISTPDAGTVIQLQG 81
>UniRef50_UPI000150A7AF Cluster: Translation initiation factor SUI1
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Translation initiation factor SUI1 family protein -
Tetrahymena thermophila SB210
Length = 101
Score = 62.9 bits (146), Expect = 3e-09
Identities = 28/64 (43%), Positives = 43/64 (67%)
Frame = +2
Query: 227 DDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACXKEFACNGTVVEHPEYGEVL 406
DD Q +H+R++QR GRK TTV+G+ E+D +KI++ K +CN T+VE E +V+
Sbjct: 13 DDFQTH-IHIRVEQRRGRKCFTTVEGIPPEFDYEKIMKYWKKWLSCNATIVEEDEGKKVI 71
Query: 407 QLQG 418
+L G
Sbjct: 72 KLNG 75
>UniRef50_A7ES43 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 165
Score = 56.0 bits (129), Expect = 4e-07
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 11/68 (16%)
Frame = +2
Query: 248 VHVRIQQRNGRKT-----------LTTVQGLSSEYDLKKIVRACXKEFACNGTVVEHPEY 394
VH+R QQ GR LTTVQGL +++KK+V+A K+FAC ++VE +
Sbjct: 71 VHLRCQQTGGRPKRNMEGKKKPHMLTTVQGLPDRFNMKKVVKAFKKKFACACSIVEDKVF 130
Query: 395 GEVLQLQG 418
GEV+Q+QG
Sbjct: 131 GEVIQIQG 138
>UniRef50_UPI0000498D7F Cluster: Translation initiation factor; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: Translation
initiation factor - Entamoeba histolytica HM-1:IMSS
Length = 110
Score = 52.4 bits (120), Expect = 5e-06
Identities = 24/53 (45%), Positives = 35/53 (66%)
Frame = +2
Query: 245 LVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACXKEFACNGTVVEHPEYGEV 403
+VH RIQQRNGRK +TT+ G+ YD I++ + F CNG++ + + GEV
Sbjct: 27 IVHFRIQQRNGRKCVTTITGIPERYDADLILKHFKRTFNCNGSLQKSKD-GEV 78
>UniRef50_A0CXT2 Cluster: Chromosome undetermined scaffold_30, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_30,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 107
Score = 51.6 bits (118), Expect = 8e-06
Identities = 20/58 (34%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = +2
Query: 245 LVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACXKEFACNGTVVEHPE-YGEVLQLQ 415
++H+ +++R+ RKT T + G+ E+DL KI+R K+F C G ++ E YG+ + ++
Sbjct: 21 VIHIHLKKRSARKTQTIIVGIPDEFDLNKIIRFWKKQFNCTGGIISKDEDYGDQVTIR 78
>UniRef50_Q40537 Cluster: Nicotiana tabacum (clone 12) activating
factor DNA sequence; n=1; Nicotiana tabacum|Rep:
Nicotiana tabacum (clone 12) activating factor DNA
sequence - Nicotiana tabacum (Common tobacco)
Length = 81
Score = 50.4 bits (115), Expect = 2e-05
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +2
Query: 167 MSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQG 304
+ +Q + FDPFA+A S ++ VH+RIQQRNG+K+LTTVQG
Sbjct: 35 IDVQIPSAFDPFAEAKDSGAPGAKE-YVHIRIQQRNGKKSLTTVQG 79
>UniRef50_A2DSB0 Cluster: Translation initiation factor SUI1 family
protein; n=2; Trichomonas vaginalis G3|Rep: Translation
initiation factor SUI1 family protein - Trichomonas
vaginalis G3
Length = 111
Score = 46.8 bits (106), Expect = 2e-04
Identities = 19/57 (33%), Positives = 32/57 (56%)
Frame = +2
Query: 248 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACXKEFACNGTVVEHPEYGEVLQLQG 418
+H+R QQ + R++LT +QGL + D K++ K C G ++ +V+QL G
Sbjct: 29 IHIRYQQVSSRRSLTIIQGLPKKLDCDKVLSFFKKSLCCGGEIIAEENGTKVIQLNG 85
>UniRef50_Q98S27 Cluster: Translation factor sui1 homolog; n=1;
Guillardia theta|Rep: Translation factor sui1 homolog -
Guillardia theta (Cryptomonas phi)
Length = 149
Score = 43.6 bits (98), Expect = 0.002
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 14/77 (18%)
Frame = +2
Query: 230 DVQDGLVHVRIQQRNGRKTLTTVQGLSSEY------------DLKKIVRACXKEFACNG- 370
++Q + +R+QQR GRK +T ++GL + DLKKI+RA + F CNG
Sbjct: 49 NIQSDEIQIRLQQRTGRKFITVIEGLGNIVIINQIDKNKKIPDLKKILRAMKQRFGCNGR 108
Query: 371 -TVVEHPEYGEVLQLQG 418
V+++ +Y VL L G
Sbjct: 109 IDVIKNNDY--VLLLNG 123
>UniRef50_Q5UQD7 Cluster: Protein translation factor SUI1 homolog;
n=1; Acanthamoeba polyphaga mimivirus|Rep: Protein
translation factor SUI1 homolog - Mimivirus
Length = 106
Score = 40.7 bits (91), Expect = 0.015
Identities = 18/77 (23%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +2
Query: 191 FDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACXKEFACNG 370
+DPF D + + + + +H++ +QR K++T ++ + + DLK ++ F C+G
Sbjct: 7 YDPFNDGLDTEQHFEK---IHIKTKQRTKTKSITIIENIPEKIDLKLFLKKLKYTFHCSG 63
Query: 371 TVVE-HPEYGEVLQLQG 418
++ + + + + +QL G
Sbjct: 64 SIQQNYDDDSKFIQLSG 80
>UniRef50_Q00YW3 Cluster: Density-regulated protein related to
translation initiation factor 1; n=2; Ostreococcus|Rep:
Density-regulated protein related to translation
initiation factor 1 - Ostreococcus tauri
Length = 173
Score = 37.1 bits (82), Expect = 0.18
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +2
Query: 269 RNGRKTLTTVQGLSS-EYDLKKIVRACXKEFACNGTVVEHPEYGEVLQLQG 418
RN RK +T V GL + DLK+ +A K+FAC +V + + L LQG
Sbjct: 94 RNRRKMITNVAGLEKFDVDLKEASKAFGKKFACGCSVTKGATGKDELDLQG 144
>UniRef50_A0E5U0 Cluster: Chromosome undetermined scaffold_8, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_8,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 223
Score = 37.1 bits (82), Expect = 0.18
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +2
Query: 245 LVHVRIQQRNGRKTLTTVQGLSSE-YDLKKIVRACXKEFACNGTVVEHPEYGEVLQLQG 418
++++++++RN K +TT+ GL DLK+ + K+F C ++ E L+LQG
Sbjct: 142 MIYIKVKERNKNKFITTLSGLEKHGLDLKETSKKISKKFGCGSSINEK----GALELQG 196
>UniRef50_A1RXI2 Cluster: Translation initiation factor SUI1; n=1;
Thermofilum pendens Hrk 5|Rep: Translation initiation
factor SUI1 - Thermofilum pendens (strain Hrk 5)
Length = 120
Score = 36.7 bits (81), Expect = 0.24
Identities = 14/45 (31%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +2
Query: 245 LVHVRIQQRNGRKTLTTVQGLS-SEYDLKKIVRACXKEFACNGTV 376
L+ +R+++R G + +T + GL + +L+++V +FAC GT+
Sbjct: 44 LIKIRVEKRKGHRDVTIITGLDVKDPELRRMVSEMKAKFACGGTI 88
>UniRef50_Q7R4J9 Cluster: GLP_49_44768_45085; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_49_44768_45085 - Giardia lamblia
ATCC 50803
Length = 105
Score = 35.5 bits (78), Expect = 0.56
Identities = 16/62 (25%), Positives = 34/62 (54%)
Frame = +2
Query: 248 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACXKEFACNGTVVEHPEYGEVLQLQGRPA 427
+H+ I ++ G+K T V ++ Y+ KIV+A ++ C+ V + + + + ++G
Sbjct: 20 IHIHIVKK-GKKYTTQVVNINQSYNFDKIVKAIKRDLCCSAYVFDETDGTKSIHVRGNYY 78
Query: 428 RE 433
RE
Sbjct: 79 RE 80
>UniRef50_A7Q7W8 Cluster: Chromosome chr18 scaffold_61, whole genome
shotgun sequence; n=4; core eudicotyledons|Rep:
Chromosome chr18 scaffold_61, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 584
Score = 33.9 bits (74), Expect = 1.7
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +2
Query: 248 VHVRIQQRNGRKTLTTVQGLSSEY-DLKKIVRACXKEFACNGTVVEHP-EYGEVLQLQG 418
+ + ++R G K +T V G S D + + K+FAC+ TV E P + G + +QG
Sbjct: 497 IQIMTERRQGNKKVTKVSGFESFLMDAEALASELQKKFACSTTVAELPGKKGHEVLVQG 555
>UniRef50_A1C8E3 Cluster: RNA binding protein Tma22, putative; n=15;
Pezizomycotina|Rep: RNA binding protein Tma22, putative
- Aspergillus clavatus
Length = 194
Score = 33.9 bits (74), Expect = 1.7
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 248 VHVRIQQRNGRKTLTTVQGLSSE-YDLKKIVRACXKEFACNGTVVEHPEYGEVLQLQG 418
V ++ +RN RK +T + GL + KK+ + K+FA +V + P E + +QG
Sbjct: 102 VQIKRVERNKRKHVTVITGLEVHGLENKKVAKELGKKFATGSSVTKSPAGVEEITVQG 159
>UniRef50_Q9LQ55 Cluster: Dynamin-2B; n=25; Magnoliophyta|Rep:
Dynamin-2B - Arabidopsis thaliana (Mouse-ear cress)
Length = 920
Score = 33.5 bits (73), Expect = 2.2
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Frame = -2
Query: 241 ILNVVLRAFDSIG-EWVECVEILDGHTIERRVSLFQRNAAILR--TQQYNCH**RAVMCS 71
+LN + + +IG E +E + I + ++RR +Q+ +++L T+Q + H RA S
Sbjct: 775 MLNQLYSSISAIGNERIESL-IQEDQNVKRRRDRYQKQSSLLSKLTRQLSIHDNRAAAAS 833
Query: 70 L--TNSQFMLTPKRNGG*XREKWKN 2
NS +P+ NGG E W N
Sbjct: 834 SWSDNSGTESSPRTNGGSSGEDWMN 858
>UniRef50_Q5WNX0 Cluster: BcrA; n=7; Firmicutes|Rep: BcrA -
Enterococcus faecalis (Streptococcus faecalis)
Length = 308
Score = 32.3 bits (70), Expect = 5.2
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 215 KSSEDDVQDGLVHVRIQQRNGRKTLTTVQ-GLSSEYDLKKIVRACXKEFACNGTVV 379
K +E DV DG + +I + + T TVQ G YD + V +EFA NG ++
Sbjct: 229 KYTEFDVSDGKIAAKILESSYHMTDFTVQDGTIRIYDFSQSVGEINREFARNGLLI 284
>UniRef50_Q5CQN1 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 718
Score = 32.3 bits (70), Expect = 5.2
Identities = 15/53 (28%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Frame = +2
Query: 245 LVHVRIQQRNG-RKTLTTVQGLSSEY--DLKKIVRACXKEFACNGTVVEHPEY 394
++ + + R G RK +T + S + DL+++ +C K+FAC+ +V + +Y
Sbjct: 630 IIEIYTESRMGTRKHVTIISPFISHFNLDLQEVAESCQKKFACSASVSQIKKY 682
>UniRef50_Q54DM6 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1163
Score = 32.3 bits (70), Expect = 5.2
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +2
Query: 164 RMSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEY 319
++SI +N F + +AIKSS +Q L + + N +TT ++ Y
Sbjct: 401 QLSIGVINVFTSYVEAIKSSNQSIQQILSDYNLYKSNSSSPITTTTTTTTNY 452
>UniRef50_Q03SW1 Cluster: Predicted membrane protein; n=1;
Lactobacillus brevis ATCC 367|Rep: Predicted membrane
protein - Lactobacillus brevis (strain ATCC 367 / JCM
1170)
Length = 931
Score = 31.9 bits (69), Expect = 6.8
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = -3
Query: 288 SVLRPFRCWIRTWTKPS*TSSSELLIASANGSNVLRFWMDIRLNVGSLCFNETLRYY 118
+ + P + R + KP+ TS +E A NG+ + + + + L VG+L FN Y
Sbjct: 701 ATVHPSQLTYRQFAKPTTTSHTERDEAPNNGTGMAPYMVSVSLFVGALAFNMMFDMY 757
>UniRef50_O04659 Cluster: A_TM021B04.2 protein; n=2; Eukaryota|Rep:
A_TM021B04.2 protein - Arabidopsis thaliana (Mouse-ear
cress)
Length = 597
Score = 31.9 bits (69), Expect = 6.8
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = -2
Query: 373 RTVARELLXACPHDLLQVIFRGKALHRSQRLTPVSLLDTDVD*TILNVVLRAFDSIGEWV 194
+T +L AC + + GK +H + T S DV + NV++ ++ S+G W
Sbjct: 242 QTTLTSILMACSRS--RNLLHGKFIHANLAETVFSKTQKDVAES-WNVMISSYISVGNWF 298
Query: 193 ECVEILD 173
+ VE+ D
Sbjct: 299 KAVEVYD 305
>UniRef50_Q93834 Cluster: UPF0392 protein F59C6.8; n=2;
Caenorhabditis|Rep: UPF0392 protein F59C6.8 -
Caenorhabditis elegans
Length = 529
Score = 31.9 bits (69), Expect = 6.8
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +2
Query: 152 PTFNRMSIQNLNTFDPF-ADAIKSSEDDVQDGL-VHVRIQQRNGRKTLTTV 298
PTFNR I N FDP+ +A K + + DGL + + + R + T+ T+
Sbjct: 397 PTFNRSKISNPPFFDPYHLNATKRAIYKISDGLKIQRKFKNRVSQGTMKTI 447
>UniRef50_A4BNS2 Cluster: A protein; n=2; Nitrococcus mobilis
Nb-231|Rep: A protein - Nitrococcus mobilis Nb-231
Length = 592
Score = 31.5 bits (68), Expect = 9.0
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = -2
Query: 289 QRLTPVSLLDTDVD*TILNVVLRAFDSIGEWVECVEILDGHTIERRV 149
+RL + +D + D +L +A DS G+W VE+++G T +R V
Sbjct: 362 RRLAELKGIDENPDLALLETARQAADS-GDWAAFVEVMNGPTAKRAV 407
>UniRef50_A0YLQ7 Cluster: Putative uncharacterized protein; n=1;
Lyngbya sp. PCC 8106|Rep: Putative uncharacterized
protein - Lyngbya sp. PCC 8106
Length = 371
Score = 31.5 bits (68), Expect = 9.0
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = -2
Query: 238 LNVVLRAFDSIGEWVECVEILD-----GHTIERRVSLFQRNAAILRTQQY 104
LN V A +S+G+W E ++D G+ +R++ ++QR I+ Y
Sbjct: 312 LNYVRPALESLGDWEEVSSLVDKVLKHGNAAQRQLEIYQRQGNIVEVVDY 361
>UniRef50_Q9LNV2 Cluster: F22G5.33; n=2; Arabidopsis thaliana|Rep:
F22G5.33 - Arabidopsis thaliana (Mouse-ear cress)
Length = 753
Score = 31.5 bits (68), Expect = 9.0
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 128 SVSLKQRDPTFNRMSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTV 298
SV + P+F + I+ N F PF+ E+ + L H R +RN R+ + V
Sbjct: 64 SVFYLRNHPSFKLLHIKTDNWFSPFSQKRSEEEETRKADLKHQRSVRRNARRKVEEV 120
>UniRef50_Q61PF6 Cluster: Putative uncharacterized protein CBG07562;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG07562 - Caenorhabditis
briggsae
Length = 3008
Score = 31.5 bits (68), Expect = 9.0
Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Frame = +2
Query: 152 PTFNRMSIQN-LNTFDP----FADAIKSSEDDVQDGLVHVRIQQRNGRKTL 289
P+ + MS+Q+ LNTF+P + DA+++SED ++H ++ +R T+
Sbjct: 524 PSSDSMSLQSKLNTFNPHEPIYLDALRNSEDKDTSVMLHDKLLERRVSNTI 574
>UniRef50_Q5V177 Cluster: Structural maintenance of chromosomes;
n=3; Halobacteriaceae|Rep: Structural maintenance of
chromosomes - Haloarcula marismortui (Halobacterium
marismortui)
Length = 908
Score = 31.5 bits (68), Expect = 9.0
Identities = 11/42 (26%), Positives = 25/42 (59%)
Frame = +2
Query: 206 DAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKK 331
+ +++ E ++QD + H+ Q+ +TLT + + EY+ K+
Sbjct: 226 NGLETKESELQDEIEHIEDQKATAEETLTQAESVLEEYEEKR 267
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 451,761,989
Number of Sequences: 1657284
Number of extensions: 8521412
Number of successful extensions: 24371
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 23714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24363
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24351434270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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