Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_M08
         (458 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    24   0.78 
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    20   9.6  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    20   9.6  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.8 bits (49), Expect = 0.78
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -2

Query: 430 SRWSPLKLQHLAVLRVLHDRTVARELLXACPHDLLQV 320
           +R   L ++HLA  RV+H    AR +L  C +  ++V
Sbjct: 598 ARQVALGMEHLAKTRVVHRDLAARNVL-VCENHTVKV 633


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 9   HFSRSHPPLRFGV 47
           H++R HP   FGV
Sbjct: 172 HYARYHPYPNFGV 184


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = -3

Query: 162 LNVGSLCFNETLRYYALNNITVTDN 88
           +N+GSL +NE   ++    +   D+
Sbjct: 287 VNLGSLGYNEICEFHRNGTVVFLDD 311


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,260
Number of Sequences: 336
Number of extensions: 2066
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10511300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)