Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_M08
(458 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0992 - 33644712-33644726,33644769-33644822,33644915-336451... 98 3e-21
07_03_0685 - 20679883-20679927,20680034-20680087,20680179-206803... 95 3e-20
05_05_0359 + 24393254-24393260,24393952-24394163,24394243-243942... 92 2e-19
04_04_1237 - 31991817-31992569,31993452-31993550,31994343-319949... 82 2e-16
11_02_0028 + 7517196-7517206,7517256-7517312,7517423-7517503,751... 29 1.4
01_01_0671 - 5137787-5137843,5138420-5138503,5138595-5138662,513... 29 1.4
01_06_1413 + 37149038-37149295,37149392-37149603,37149687-371499... 29 2.4
09_01_0111 + 1727021-1727206,1727324-1727373,1727440-1727491,172... 28 4.2
12_01_1080 + 11241590-11241625,11241723-11242018,11242113-112422... 27 5.5
06_03_0742 + 24027506-24027721,24028835-24029004,24029893-240300... 27 5.5
05_01_0072 - 486211-486254,486350-486524,486658-486852,487489-48... 27 5.5
01_07_0344 - 42869465-42869502,42869597-42869771,42869923-428701... 27 5.5
11_06_0511 - 24434007-24436814 27 7.3
02_05_0499 - 29534462-29535315,29535871-29537221 27 7.3
02_01_0323 - 2201294-2202337 27 7.3
08_01_0183 - 1537906-1539141 27 9.6
06_03_1154 - 28057329-28057728,28058141-28058184,28058269-280584... 27 9.6
02_03_0116 - 15440263-15441024,15441097-15443451 27 9.6
02_02_0068 + 6536756-6537253 27 9.6
>01_06_0992 -
33644712-33644726,33644769-33644822,33644915-33645126,
33645436-33645472
Length = 105
Score = 97.9 bits (233), Expect = 3e-21
Identities = 49/87 (56%), Positives = 61/87 (70%), Gaps = 3/87 (3%)
Frame = +2
Query: 167 MSIQNLNTFDPFADAIKSSEDDVQDG---LVHVRIQQRNGRKTLTTVQGLSSEYDLKKIV 337
+ +Q + FDPFA+A + + V G VHVRIQQRNGRK+LTTVQGL EY KI+
Sbjct: 4 LDVQLPSAFDPFAEA-NAEDSSVGAGSKDYVHVRIQQRNGRKSLTTVQGLKKEYSYNKIL 62
Query: 338 RACXKEFACNGTVVEHPEYGEVLQLQG 418
+ KEF CNGTVV+ PE G+V+QLQG
Sbjct: 63 KDLKKEFCCNGTVVQDPELGQVIQLQG 89
>07_03_0685 -
20679883-20679927,20680034-20680087,20680179-20680390,
20680476-20680550,20683094-20683168,20686196-20686264,
20686349-20686502,20686577-20686654,20689102-20689194,
20689491-20689640,20690134-20690268,20691009-20691098,
20691412-20691453,20691796-20692053,20692131-20692207,
20693126-20693186,20693687-20693905,20694936-20695208,
20695314-20695505,20695841-20696011
Length = 840
Score = 94.7 bits (225), Expect = 3e-20
Identities = 48/87 (55%), Positives = 59/87 (67%), Gaps = 3/87 (3%)
Frame = +2
Query: 167 MSIQNLNTFDPFADAIKSSEDDVQDG---LVHVRIQQRNGRKTLTTVQGLSSEYDLKKIV 337
+ IQ FDPFA+A + + G VHVRIQQRNGRK+LTTVQGL E+ KI+
Sbjct: 729 LDIQIPTAFDPFAEA-NAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 787
Query: 338 RACXKEFACNGTVVEHPEYGEVLQLQG 418
+ KEF CNGTVV+ PE G+V+QLQG
Sbjct: 788 KDLKKEFCCNGTVVQDPELGQVIQLQG 814
>05_05_0359 +
24393254-24393260,24393952-24394163,24394243-24394296,
24394400-24394444
Length = 105
Score = 91.9 bits (218), Expect = 2e-19
Identities = 46/78 (58%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Frame = +2
Query: 194 DPFADAIKSSEDDVQDGL---VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACXKEFAC 364
DPFA+A + + G VHVRIQQRNGRK+LTTVQGL EY KI++ KEF C
Sbjct: 3 DPFAEA-NAEDSGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEYSYNKILKDLKKEFCC 61
Query: 365 NGTVVEHPEYGEVLQLQG 418
NGTVV+ PE G+V+QLQG
Sbjct: 62 NGTVVQDPELGQVIQLQG 79
>04_04_1237 -
31991817-31992569,31993452-31993550,31994343-31994976,
31995329-31995585
Length = 580
Score = 81.8 bits (193), Expect = 2e-16
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +2
Query: 248 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACXKEFACNGTVVEHPEYGEVLQLQG 418
VHVR+QQRNGRKTLTTVQG+ EY+ K++R +E CNG VVE E G+++QLQG
Sbjct: 498 VHVRVQQRNGRKTLTTVQGIGGEYNYAKVLRDLKRELCCNGNVVEDKELGKIIQLQG 554
>11_02_0028 +
7517196-7517206,7517256-7517312,7517423-7517503,
7518009-7518108,7518454-7518507,7519045-7519115,
7519248-7519455,7519647-7519700,7519934-7520025,
7520090-7520285,7521158-7521339,7521429-7521496,
7522848-7522920,7523010-7523071,7523155-7524079,
7524843-7525133,7525601-7525871
Length = 931
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/22 (63%), Positives = 18/22 (81%), Gaps = 1/22 (4%)
Frame = -2
Query: 391 LRVLHD-RTVARELLXACPHDL 329
LR+LHD + VAR++L A PHDL
Sbjct: 564 LRMLHDGKWVARKVLGAVPHDL 585
>01_01_0671 -
5137787-5137843,5138420-5138503,5138595-5138662,
5138854-5138935,5139282-5139346,5139504-5139747
Length = 199
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 269 RNGRKTLTTVQGLSS-EYDLKKIVRACXKEFACNGTVVEHPEYGEVLQLQG 418
RN RK +T V+GL L + K+FA +VV+ P E + +QG
Sbjct: 115 RNKRKCVTVVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQG 165
>01_06_1413 +
37149038-37149295,37149392-37149603,37149687-37149951,
37150099-37150407
Length = 347
Score = 28.7 bits (61), Expect = 2.4
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 118 VVSQRFVETKRPYVQSYVHPESQHI 192
V +QR+V K P+V+ + HPE H+
Sbjct: 299 VEAQRYVAEKLPWVRYHEHPEGGHL 323
>09_01_0111 +
1727021-1727206,1727324-1727373,1727440-1727491,
1727553-1727598,1727671-1727690,1727897-1727983,
1729290-1729466,1729542-1729565,1729639-1729725,
1729799-1729870,1730622-1732496
Length = 891
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = -2
Query: 388 RVLHDRTVARELLXACPHDLLQVIFRGKALHRSQRLTPVSLLDTD 254
+VLH+ +A L CP + G RS+ L S TD
Sbjct: 118 KVLHNMAIAESFLDGCPDPKKLLEILGNVKRRSEELACASRQQTD 162
>12_01_1080 + 11241590-11241625,11241723-11242018,11242113-11242269,
11242381-11242449,11242551-11243480,11243868-11243906,
11244414-11244478,11244663-11244768,11244850-11245050,
11247001-11247201,11247756-11247779,11249425-11249586,
11249676-11249915,11250267-11250479,11250618-11250968,
11251041-11251193,11251649-11251858,11252049-11252267,
11252365-11252482,11252879-11253828,11254023-11254220,
11254294-11254553,11255316-11255505,11255817-11256169,
11258278-11258386,11258466-11258615,11258748-11258844,
11259315-11259415
Length = 2065
Score = 27.5 bits (58), Expect = 5.5
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 182 LNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTL--TTVQGLSS 313
LN+ PF D +KS++D ++ L H R + N + TT GL++
Sbjct: 975 LNSTKPFEDVVKSAQDSLR-WLCHKRFLEWNNETKIYSTTPLGLAA 1019
>06_03_0742 +
24027506-24027721,24028835-24029004,24029893-24030052,
24030162-24030455,24031490-24031717,24031827-24032006,
24032079-24032238,24032591-24032617,24033426-24033613,
24034269-24034532,24035123-24035218,24035311-24035399,
24035473-24035620,24035842-24036051,24036141-24036440,
24037906-24038248,24038747-24038952,24039071-24039273,
24040021-24040117,24040148-24040222,24040328-24040602,
24041116-24041256,24041469-24042339,24042481-24042520,
24042605-24043050
Length = 1808
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 213 IASANGSNVLRFWMDIRLNVGSL 145
IA++N VLR WMD++ NV L
Sbjct: 440 IAASNHMEVLRRWMDLQRNVNVL 462
>05_01_0072 -
486211-486254,486350-486524,486658-486852,487489-487599,
487693-487905,488432-488539,488621-488762,489157-490418,
490460-490480,490842-491228
Length = 885
Score = 27.5 bits (58), Expect = 5.5
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 193 ECVEILDGHTIERRVSLFQRNAAILRTQQYNC 98
+C+E + H I+ VS F +L T Y C
Sbjct: 676 KCIECIPQHAIQFIVSTFYGQVVMLSTHPYGC 707
>01_07_0344 -
42869465-42869502,42869597-42869771,42869923-42870117,
42870678-42870788,42870899-42871111,42871551-42871658,
42871732-42871873,42872150-42873449,42874032-42874085,
42874491-42874923
Length = 922
Score = 27.5 bits (58), Expect = 5.5
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 193 ECVEILDGHTIERRVSLFQRNAAILRTQQYNC 98
+C+E + H I+ VS F +L T Y C
Sbjct: 715 KCIECIPQHAIQFIVSTFYGQVVMLSTHPYGC 746
>11_06_0511 - 24434007-24436814
Length = 935
Score = 27.1 bits (57), Expect = 7.3
Identities = 20/74 (27%), Positives = 34/74 (45%)
Frame = +1
Query: 22 LIRHYVLELT*IGCLSAST*QRVISDSYIVECVVSQRFVETKRPYVQSYVHPESQHIRPI 201
+++ ++ E +GCL I D YIV V S+++ TKR V H + ++ I
Sbjct: 101 VLQSWIGEARKLGCLVEQ-----IMDEYIVYIVQSKQYRLTKRVQVILASHRFTAQLKEI 155
Query: 202 RRCYQKLGGRRSRW 243
+ L + RW
Sbjct: 156 EVELEHLSKMKKRW 169
>02_05_0499 - 29534462-29535315,29535871-29537221
Length = 734
Score = 27.1 bits (57), Expect = 7.3
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = -3
Query: 252 WTKPS*TSSSELLIASANGSNVLRFWMDIRLNVGSLCFNETLRYYALNNITVTDNA 85
W S +SSS A+A+G V F ++N+ N+T++ L + + NA
Sbjct: 97 WESKSSSSSSNSAAAAADGKYVASFSTVFKVNLFRSNLNKTVKGEGLAFVVASSNA 152
>02_01_0323 - 2201294-2202337
Length = 347
Score = 27.1 bits (57), Expect = 7.3
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = +1
Query: 157 VQSYVHPESQHIRPIRRCYQKLGGRRSRWFSPRPYPATKRA*DAD---YGARP 306
V+ +VH + P R Y R+F PRP P A AD YG+ P
Sbjct: 3 VRRFVHLVLEEFAPRRSNYTLRNIDMDRFFLPRPSPVPSAAAAADAVEYGSLP 55
>08_01_0183 - 1537906-1539141
Length = 411
Score = 26.6 bits (56), Expect = 9.6
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = -3
Query: 231 SSSELLIASANGSNVLRFWMDIRLNVGSLCFNETLRYY 118
S+ + + + ++ + WMD +++ GS LRYY
Sbjct: 250 STGDKYLVVCDDGHLYQIWMDEKISYGSGAIASVLRYY 287
>06_03_1154 -
28057329-28057728,28058141-28058184,28058269-28058445,
28060193-28060276,28060411-28060521
Length = 271
Score = 26.6 bits (56), Expect = 9.6
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -2
Query: 223 RAFDSIGEWVECVEILDGHTIERRVSLFQRNAAILRTQQYNCH 95
R +IG C EI+DG+ IE S+FQ I +T Y H
Sbjct: 38 RKCGAIGGTARCKEIVDGYIIEDG-SIFQSAGYITKT--YEAH 77
>02_03_0116 - 15440263-15441024,15441097-15443451
Length = 1038
Score = 26.6 bits (56), Expect = 9.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 300 KAFPRNMT*RRSCGHAXR 353
KA PR + RR+CGHA R
Sbjct: 1013 KAEPRQVRVRRACGHASR 1030
>02_02_0068 + 6536756-6537253
Length = 165
Score = 26.6 bits (56), Expect = 9.6
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = +3
Query: 336 CGHAXRSSRATV--RSWSTRSTARCCSFRGDQR 428
CG R +V RSW R ARCC R +R
Sbjct: 64 CGDPARCDSGSVVARSWVFRRRARCCRRRPARR 96
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,423,059
Number of Sequences: 37544
Number of extensions: 243772
Number of successful extensions: 696
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 907440304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -