Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_M08
         (458 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02588-1|AAA18901.1|  110|Anopheles gambiae translation initiati...   166   4e-43
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   3.9  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   3.9  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   3.9  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            23   5.1  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    23   6.8  
AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase...    23   6.8  

>U02588-1|AAA18901.1|  110|Anopheles gambiae translation initiation
           factor protein.
          Length = 110

 Score =  166 bits (403), Expect = 4e-43
 Identities = 76/84 (90%), Positives = 81/84 (96%)
 Frame = +2

Query: 167 MSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRAC 346
           MSIQNLNTFDPFADAIK ++ DVQDGLVH+RIQQRNGRKTLTTVQGLS+EYDLKKIVRAC
Sbjct: 1   MSIQNLNTFDPFADAIKGADYDVQDGLVHIRIQQRNGRKTLTTVQGLSAEYDLKKIVRAC 60

Query: 347 XKEFACNGTVVEHPEYGEVLQLQG 418
            KEFACNGTV+EHPEYGEVLQLQG
Sbjct: 61  KKEFACNGTVIEHPEYGEVLQLQG 84



 Score = 25.0 bits (52), Expect = 1.3
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = +3

Query: 414 RGDQRENICQ 443
           +GDQRENICQ
Sbjct: 83  QGDQRENICQ 92


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
 Frame = -1

Query: 314 PRKGLA--P*SASYARFVAGYG 255
           P  G A  P +ASY RF+AG G
Sbjct: 249 PENGYAEEPSNASYPRFIAGPG 270


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
 Frame = -1

Query: 314 PRKGLA--P*SASYARFVAGYG 255
           P  G A  P +ASY RF+AG G
Sbjct: 249 PENGYAEEPSNASYPRFIAGPG 270


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 424 WSPLKLQHLAVLRVLHDRTVARELLXACPHDLL 326
           ++P   Q  A      +RTVA  L  ACPH +L
Sbjct: 111 YAPSGSQRGAEREEFFNRTVAFYLRNACPHVIL 143


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -3

Query: 276 PFRCWIRTWTK 244
           P  CWI  WT+
Sbjct: 565 PIHCWIHPWTE 575


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 22.6 bits (46), Expect = 6.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 160 QSYVHPESQHIRPIR 204
           QS  HP SQH +P R
Sbjct: 266 QSQQHPSSQHQQPSR 280


>AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase
           protein.
          Length = 309

 Score = 22.6 bits (46), Expect = 6.8
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -2

Query: 442 WQIFSRWSPLKLQHLAVLRVLHDRTVARELL 350
           W +F+    + L+ +   + +HD+T  REL+
Sbjct: 227 WTVFTESISVSLEQVERFKAIHDQT-GRELV 256


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 476,206
Number of Sequences: 2352
Number of extensions: 9140
Number of successful extensions: 21
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39544623
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)