Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_M04
         (654 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   1.9  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   4.5  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   4.5  
U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              21   7.9  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 374 SSRNLAHDPVQHPDDSPSDNP 312
           +S  + H+PV   + SPS NP
Sbjct: 495 ASTAVIHEPVVETNSSPSPNP 515


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 22/105 (20%), Positives = 48/105 (45%), Gaps = 10/105 (9%)
 Frame = +2

Query: 212 FNDVLXDIVLGEEKESKSXY-----DEGFRAGIXAGNIXGYHLGYHRGA---ELGRELGF 367
           F   + D+V G +K+ +  Y     +    + + A  +   H+  +  +   EL    G 
Sbjct: 233 FTKHMLDVVSGTQKKKRKIYLFSGHESNIASVLHALQLYYPHVPEYSSSIIMELHNIEGT 292

Query: 368 YWSTVNEYLEL-NKTSDAKL-SXKIIAQLLKVKELIDNFPPNNSE 496
           ++  +  YL + ++  + +L   +++  L K  +LI+N  P+N E
Sbjct: 293 HYVKIVYYLGIPSEARELQLPGCEVLCPLYKYLQLIENVIPSNEE 337


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 22/105 (20%), Positives = 48/105 (45%), Gaps = 10/105 (9%)
 Frame = +2

Query: 212 FNDVLXDIVLGEEKESKSXY-----DEGFRAGIXAGNIXGYHLGYHRGA---ELGRELGF 367
           F   + D+V G +K+ +  Y     +    + + A  +   H+  +  +   EL    G 
Sbjct: 248 FTKHMLDVVSGTQKKKRKIYLFSGHESNIASVLHALQLYYPHVPEYSSSIIMELHNIEGT 307

Query: 368 YWSTVNEYLEL-NKTSDAKL-SXKIIAQLLKVKELIDNFPPNNSE 496
           ++  +  YL + ++  + +L   +++  L K  +LI+N  P+N E
Sbjct: 308 HYVKIVYYLGIPSEARELQLPGCEVLCPLYKYLQLIENVIPSNEE 352


>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 600 HSKRNDSMKTTIRGLC 647
           +SKR D ++ T+R LC
Sbjct: 152 YSKRMDVLEATLRVLC 167


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,775
Number of Sequences: 438
Number of extensions: 2675
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)