Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_M02
(348 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 194 1e-50
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 194 1e-50
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 194 1e-50
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 194 1e-50
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 134 2e-32
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 109 5e-25
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 109 5e-25
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 100 3e-22
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 48 1e-06
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 44 3e-05
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 43 5e-05
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 43 5e-05
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 43 5e-05
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 42 2e-04
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 35 0.018
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 35 0.018
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 33 0.074
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 33 0.074
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 29 0.91
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 29 0.91
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 29 0.91
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 1.2
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 28 2.1
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 28 2.1
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 27 3.7
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 27 3.7
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 26 6.4
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 26 6.4
Z74473-4|CAA98953.1| 390|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 26 8.5
AF026213-6|AAB71307.1| 655|Caenorhabditis elegans Temporarily a... 26 8.5
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 194 bits (474), Expect = 1e-50
Identities = 89/94 (94%), Positives = 91/94 (96%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVL 243
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTI KF KEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 244 DKLKAERERGITIDIALWKFETSKYYVTIIDAPG 345
DKLKAERERGITIDIALWKFET+KYY+TIIDAPG
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPG 94
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 194 bits (474), Expect = 1e-50
Identities = 89/94 (94%), Positives = 91/94 (96%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVL 243
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTI KF KEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 244 DKLKAERERGITIDIALWKFETSKYYVTIIDAPG 345
DKLKAERERGITIDIALWKFET+KYY+TIIDAPG
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPG 94
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 194 bits (474), Expect = 1e-50
Identities = 89/94 (94%), Positives = 91/94 (96%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVL 243
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTI KF KEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 244 DKLKAERERGITIDIALWKFETSKYYVTIIDAPG 345
DKLKAERERGITIDIALWKFET+KYY+TIIDAPG
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPG 94
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 194 bits (474), Expect = 1e-50
Identities = 89/94 (94%), Positives = 91/94 (96%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVL 243
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTI KF KEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 244 DKLKAERERGITIDIALWKFETSKYYVTIIDAPG 345
DKLKAERERGITIDIALWKFET+KYY+TIIDAPG
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPG 94
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 134 bits (323), Expect = 2e-32
Identities = 61/67 (91%), Positives = 62/67 (92%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVL 243
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTI KF KEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 244 DKLKAER 264
DKLK +
Sbjct: 61 DKLKVTK 67
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 109 bits (262), Expect = 5e-25
Identities = 49/91 (53%), Positives = 64/91 (70%)
Frame = +1
Query: 73 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVLDKL 252
+K IN++V+GHVD+GKST GHL++ +D RTI KF EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 253 KAERERGITIDIALWKFETSKYYVTIIDAPG 345
+ ERERG+T+DI FETS + ++DAPG
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPG 257
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 109 bits (262), Expect = 5e-25
Identities = 49/91 (53%), Positives = 64/91 (70%)
Frame = +1
Query: 73 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVLDKL 252
+K IN++V+GHVD+GKST GHL++ +D RTI KF EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 253 KAERERGITIDIALWKFETSKYYVTIIDAPG 345
+ ERERG+T+DI FETS + ++DAPG
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPG 275
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 100 bits (239), Expect = 3e-22
Identities = 44/93 (47%), Positives = 64/93 (68%)
Frame = +1
Query: 67 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVLD 246
G K HIN+V +GHVD+GKST G L++ G +DKRT+ K+ +EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 247 KLKAERERGITIDIALWKFETSKYYVTIIDAPG 345
ERE+G T+++ FET K + TI+DAPG
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPG 196
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 48.4 bits (110), Expect = 1e-06
Identities = 33/86 (38%), Positives = 43/86 (50%)
Frame = +1
Query: 88 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVLDKLKAERE 267
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI---------HVAGHVDKGN----TVTDFLDIERE 73
Query: 268 RGITIDIALWKFETSKYYVTIIDAPG 345
RGIT+ A + + + +ID PG
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPG 99
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 44.0 bits (99), Expect = 3e-05
Identities = 28/86 (32%), Positives = 40/86 (46%)
Frame = +1
Query: 88 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVLDKLKAERE 267
NI + H+DSGK+T T ++Y G ID + +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID----------SMHEVRGKDDVGATMDFMDLERQ 95
Query: 268 RGITIDIALWKFETSKYYVTIIDAPG 345
RGITI A + + IID PG
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPG 121
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 43.2 bits (97), Expect = 5e-05
Identities = 32/92 (34%), Positives = 44/92 (47%)
Frame = +1
Query: 70 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVLDK 249
++K H+N+ IGHVD GK+T T I K A G KY +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTS------------AITKIL--ATSKGAKYRKYE-DIDN 89
Query: 250 LKAERERGITIDIALWKFETSKYYVTIIDAPG 345
E+ RGITI+ ++ET+K + ID PG
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPG 121
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 43.2 bits (97), Expect = 5e-05
Identities = 32/92 (34%), Positives = 44/92 (47%)
Frame = +1
Query: 70 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVLDK 249
++K H+N+ IGHVD GK+T T I K A G KY +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTS------------AITKIL--ATSKGAKYRKYE-DIDN 90
Query: 250 LKAERERGITIDIALWKFETSKYYVTIIDAPG 345
E+ RGITI+ ++ET+K + ID PG
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPG 122
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 43.2 bits (97), Expect = 5e-05
Identities = 32/92 (34%), Positives = 44/92 (47%)
Frame = +1
Query: 70 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVLDK 249
++K H+N+ IGHVD GK+T T I K A G KY +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTS------------AITKIL--ATSKGAKYRKYE-DIDN 90
Query: 250 LKAERERGITIDIALWKFETSKYYVTIIDAPG 345
E+ RGITI+ ++ET+K + ID PG
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPG 122
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 41.5 bits (93), Expect = 2e-04
Identities = 28/86 (32%), Positives = 38/86 (44%)
Frame = +1
Query: 88 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVLDKLKAERE 267
N ++ HVD GKST L+ CG + Q+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPP---------GQKQ---------MLDKLQVERE 85
Query: 268 RGITIDIALWKFETSKYYVTIIDAPG 345
RGIT+ Y + +ID PG
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPG 111
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 34.7 bits (76), Expect = 0.018
Identities = 27/90 (30%), Positives = 43/90 (47%)
Frame = +1
Query: 76 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVLDKLK 255
K ++N+ IGH+D GK+T T + K+ K K + +DK K
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQA---KKGFAKHIKFDE------------IDKGK 87
Query: 256 AERERGITIDIALWKFETSKYYVTIIDAPG 345
E++RGITI++A +E+ + D PG
Sbjct: 88 EEKKRGITINVAHIGYESPLRRYSHTDCPG 117
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 34.7 bits (76), Expect = 0.018
Identities = 27/90 (30%), Positives = 43/90 (47%)
Frame = +1
Query: 76 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVLDKLK 255
K ++N+ IGH+D GK+T T + K+ K K + +DK K
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQA---KKGFAKHIKFDE------------IDKGK 87
Query: 256 AERERGITIDIALWKFETSKYYVTIIDAPG 345
E++RGITI++A +E+ + D PG
Sbjct: 88 EEKKRGITINVAHIGYESPLRRYSHTDCPG 117
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.074
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 159
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.074
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 159
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 29.1 bits (62), Expect = 0.91
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +1
Query: 13 ESISDITRSL*SRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIXK 186
E+++++ R PK +EK I + +V+ G TTG +CGG ++ R + +
Sbjct: 1284 ETMAELKRKFNEFKRPKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVR 1343
Query: 187 FXKEAQEMGK 216
AQE K
Sbjct: 1344 MLDGAQEKWK 1353
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 29.1 bits (62), Expect = 0.91
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +1
Query: 13 ESISDITRSL*SRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIXK 186
E+++++ R PK +EK I + +V+ G TTG +CGG ++ R + +
Sbjct: 1284 ETMAELKRKFNEFKRPKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVR 1343
Query: 187 FXKEAQEMGK 216
AQE K
Sbjct: 1344 MLDGAQEKWK 1353
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 29.1 bits (62), Expect = 0.91
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +1
Query: 13 ESISDITRSL*SRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIXK 186
E+++++ R PK +EK I + +V+ G TTG +CGG ++ R + +
Sbjct: 1284 ETMAELKRKFNEFKRPKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVR 1343
Query: 187 FXKEAQEMGK 216
AQE K
Sbjct: 1344 MLDGAQEKWK 1353
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 28.7 bits (61), Expect = 1.2
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 85 INIVVIGHVDSGKSTTT 135
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 1.2
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 85 INIVVIGHVDSGKSTTT 135
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 58 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 150
P K+ + V+G+VD+GKST G L +
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 58 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 150
P K+ + V+G+VD+GKST G L +
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 27.1 bits (57), Expect = 3.7
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
Frame = +1
Query: 70 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVLD 246
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRM------------AGKLRY---MD 59
Query: 247 KLKAERERGITIDIALWKFETSKYYVTIIDAPG 345
+ E+ RGIT+ + + +ID+PG
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPG 92
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 27.1 bits (57), Expect = 3.7
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
Frame = +1
Query: 70 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFXKEAQEMGKGSFKYAWVLD 246
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRM------------AGKLRY---MD 59
Query: 247 KLKAERERGITIDIALWKFETSKYYVTIIDAPG 345
+ E+ RGIT+ + + +ID+PG
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPG 92
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 166 DKRTIXKFXKEAQEMGKGSFKYAWVLDKLKAERE 267
+KR + KE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 166 DKRTIXKFXKEAQEMGKGSFKYAWVLDKLKAERE 267
+KR + KE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>Z74473-4|CAA98953.1| 390|Caenorhabditis elegans Hypothetical
protein F56H9.4 protein.
Length = 390
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 70 KEKTHINIVVIGHVDSGKSTTTGHL-IYKCGG 162
++K + +++IG +SGKST + I CGG
Sbjct: 40 RKKKALKLLIIGPGESGKSTIVKQVRILHCGG 71
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical
protein C46C2.1b protein.
Length = 1677
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 163 IDKRTIXKFXKEAQEMGKGSFK 228
IDK +F K +E+G+GSFK
Sbjct: 323 IDKSKNGRFLKFDEELGRGSFK 344
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical
protein C46C2.1a protein.
Length = 1838
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 163 IDKRTIXKFXKEAQEMGKGSFK 228
IDK +F K +E+G+GSFK
Sbjct: 323 IDKSKNGRFLKFDEELGRGSFK 344
>AF026213-6|AAB71307.1| 655|Caenorhabditis elegans Temporarily
assigned gene nameprotein 123 protein.
Length = 655
Score = 25.8 bits (54), Expect = 8.5
Identities = 6/13 (46%), Positives = 7/13 (53%)
Frame = -3
Query: 163 YHHICRSSDQWWW 125
Y H+C WWW
Sbjct: 570 YFHLCAEDYHWWW 582
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,257,051
Number of Sequences: 27780
Number of extensions: 123305
Number of successful extensions: 392
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 390
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 461821634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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