Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_L23
         (401 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   1.4  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    23   3.2  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 15/65 (23%), Positives = 29/65 (44%)
 Frame = +2

Query: 56  VSAEIRPIRYARRCGXSSYHIQKSKCAQCGYPAAKLRSYHWSVKAKRXKTTGTGRMRHLK 235
           ++AE +  R  ++     Y   K +C++        + YH   +AKR K     + + L 
Sbjct: 202 IAAERKEARLEKQ-EADRYASLKQECSEKQVHFQLFKLYHNEKEAKRLKEDQISKQQELN 260

Query: 236 IVRRR 250
           I+ +R
Sbjct: 261 IIEKR 265


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 298 SLLGRRWFPFFKTITEAP 245
           S  G+ W+  +K I EAP
Sbjct: 251 SFTGKMWYQVYKQIREAP 268


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 341,488
Number of Sequences: 2352
Number of extensions: 5567
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32067225
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)