Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_L23
(401 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L11567-1|AAA62148.1| 97|Homo sapiens ribosomal protein L37 pro... 114 1e-25
D23661-1|BAA04888.1| 97|Homo sapiens ribosomal protein L37 pro... 114 1e-25
CR456890-1|CAG33171.1| 97|Homo sapiens RPL37 protein. 114 1e-25
BC084576-1|AAH84576.1| 97|Homo sapiens RPL37 protein protein. 114 1e-25
BC079477-1|AAH79477.1| 97|Homo sapiens ribosomal protein L37 p... 114 1e-25
AB061834-1|BAB79472.1| 97|Homo sapiens ribosomal protein L37 p... 114 1e-25
S79979-1|AAB47039.2| 97|Homo sapiens ribosomal protein L37 pro... 111 6e-25
AB007183-1|BAA25842.1| 27|Homo sapiens ribosomal protein L37 p... 50 2e-06
AL355305-3|CAI14559.1| 436|Homo sapiens protein ( Human DNA seq... 29 7.7
AL355305-2|CAI14560.1| 360|Homo sapiens protein ( Human DNA seq... 29 7.7
>L11567-1|AAA62148.1| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 114 bits (274), Expect = 1e-25
Identities = 50/75 (66%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Frame = +2
Query: 89 RRCGXSSYHIQKSKCAQCGYPAAKLRSYHWSVKAKRXKTTGTGRMRHLKIVRRRFRNGFK 268
RRCG +YH+QKS C +CGYPA + R Y+WS KAKR TTGTGRMRHLKIV RRFR+GF+
Sbjct: 20 RRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKIVYRRFRHGFR 79
Query: 269 EG-KPTPPKKAVASS 310
EG P P + AVA+S
Sbjct: 80 EGTTPKPKRAAVAAS 94
Score = 46.0 bits (104), Expect = 5e-05
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +1
Query: 31 MTKGTSSFGKRRNKTHTLCTK 93
MTKGTSSFGKRRNKTHTLC +
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRR 21
>D23661-1|BAA04888.1| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 114 bits (274), Expect = 1e-25
Identities = 50/75 (66%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Frame = +2
Query: 89 RRCGXSSYHIQKSKCAQCGYPAAKLRSYHWSVKAKRXKTTGTGRMRHLKIVRRRFRNGFK 268
RRCG +YH+QKS C +CGYPA + R Y+WS KAKR TTGTGRMRHLKIV RRFR+GF+
Sbjct: 20 RRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKIVYRRFRHGFR 79
Query: 269 EG-KPTPPKKAVASS 310
EG P P + AVA+S
Sbjct: 80 EGTTPKPKRAAVAAS 94
Score = 46.0 bits (104), Expect = 5e-05
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +1
Query: 31 MTKGTSSFGKRRNKTHTLCTK 93
MTKGTSSFGKRRNKTHTLC +
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRR 21
>CR456890-1|CAG33171.1| 97|Homo sapiens RPL37 protein.
Length = 97
Score = 114 bits (274), Expect = 1e-25
Identities = 50/75 (66%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Frame = +2
Query: 89 RRCGXSSYHIQKSKCAQCGYPAAKLRSYHWSVKAKRXKTTGTGRMRHLKIVRRRFRNGFK 268
RRCG +YH+QKS C +CGYPA + R Y+WS KAKR TTGTGRMRHLKIV RRFR+GF+
Sbjct: 20 RRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKIVYRRFRHGFR 79
Query: 269 EG-KPTPPKKAVASS 310
EG P P + AVA+S
Sbjct: 80 EGTTPKPKRAAVAAS 94
Score = 46.0 bits (104), Expect = 5e-05
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +1
Query: 31 MTKGTSSFGKRRNKTHTLCTK 93
MTKGTSSFGKRRNKTHTLC +
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRR 21
>BC084576-1|AAH84576.1| 97|Homo sapiens RPL37 protein protein.
Length = 97
Score = 114 bits (274), Expect = 1e-25
Identities = 50/75 (66%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Frame = +2
Query: 89 RRCGXSSYHIQKSKCAQCGYPAAKLRSYHWSVKAKRXKTTGTGRMRHLKIVRRRFRNGFK 268
RRCG +YH+QKS C +CGYPA + R Y+WS KAKR TTGTGRMRHLKIV RRFR+GF+
Sbjct: 20 RRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKIVYRRFRHGFR 79
Query: 269 EG-KPTPPKKAVASS 310
EG P P + AVA+S
Sbjct: 80 EGTTPKPKRAAVAAS 94
Score = 46.0 bits (104), Expect = 5e-05
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +1
Query: 31 MTKGTSSFGKRRNKTHTLCTK 93
MTKGTSSFGKRRNKTHTLC +
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRR 21
>BC079477-1|AAH79477.1| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 114 bits (274), Expect = 1e-25
Identities = 50/75 (66%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Frame = +2
Query: 89 RRCGXSSYHIQKSKCAQCGYPAAKLRSYHWSVKAKRXKTTGTGRMRHLKIVRRRFRNGFK 268
RRCG +YH+QKS C +CGYPA + R Y+WS KAKR TTGTGRMRHLKIV RRFR+GF+
Sbjct: 20 RRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKIVYRRFRHGFR 79
Query: 269 EG-KPTPPKKAVASS 310
EG P P + AVA+S
Sbjct: 80 EGTTPKPKRAAVAAS 94
Score = 46.0 bits (104), Expect = 5e-05
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +1
Query: 31 MTKGTSSFGKRRNKTHTLCTK 93
MTKGTSSFGKRRNKTHTLC +
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRR 21
>AB061834-1|BAB79472.1| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 114 bits (274), Expect = 1e-25
Identities = 50/75 (66%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Frame = +2
Query: 89 RRCGXSSYHIQKSKCAQCGYPAAKLRSYHWSVKAKRXKTTGTGRMRHLKIVRRRFRNGFK 268
RRCG +YH+QKS C +CGYPA + R Y+WS KAKR TTGTGRMRHLKIV RRFR+GF+
Sbjct: 20 RRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKIVYRRFRHGFR 79
Query: 269 EG-KPTPPKKAVASS 310
EG P P + AVA+S
Sbjct: 80 EGTTPKPKRAAVAAS 94
Score = 46.0 bits (104), Expect = 5e-05
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +1
Query: 31 MTKGTSSFGKRRNKTHTLCTK 93
MTKGTSSFGKRRNKTHTLC +
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRR 21
>S79979-1|AAB47039.2| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 111 bits (268), Expect = 6e-25
Identities = 49/75 (65%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Frame = +2
Query: 89 RRCGXSSYHIQKSKCAQCGYPAAKLRSYHWSVKAKRXKTTGTGRMRHLKIVRRRFRNGFK 268
RRCG +YH+QKS C +CGYPA + R Y+WS KAKR TTGTGRM HLKIV RRFR+GF+
Sbjct: 20 RRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMSHLKIVYRRFRHGFR 79
Query: 269 EG-KPTPPKKAVASS 310
EG P P + AVA+S
Sbjct: 80 EGTTPKPKRAAVAAS 94
Score = 46.0 bits (104), Expect = 5e-05
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +1
Query: 31 MTKGTSSFGKRRNKTHTLCTK 93
MTKGTSSFGKRRNKTHTLC +
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRR 21
>AB007183-1|BAA25842.1| 27|Homo sapiens ribosomal protein L37
protein.
Length = 27
Score = 50.4 bits (115), Expect = 2e-06
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = +2
Query: 173 HWSVKAKRXKTTGTGRMRHLKIVRRRF 253
+WS KAKR TTGTGRMRHLKIV RRF
Sbjct: 1 NWSAKAKRRNTTGTGRMRHLKIVYRRF 27
>AL355305-3|CAI14559.1| 436|Homo sapiens protein ( Human DNA
sequence from clone RP11-487F23 on chromosome 6. ).
Length = 436
Score = 28.7 bits (61), Expect = 7.7
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 124 IKMRPMWISCSKITILPLVSEG*AXEDYW 210
IK RP W CSK LP V+E + W
Sbjct: 253 IKRRPPWQICSKFGALPFVAEKPSRTTSW 281
>AL355305-2|CAI14560.1| 360|Homo sapiens protein ( Human DNA
sequence from clone RP11-487F23 on chromosome 6. ).
Length = 360
Score = 28.7 bits (61), Expect = 7.7
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 124 IKMRPMWISCSKITILPLVSEG*AXEDYW 210
IK RP W CSK LP V+E + W
Sbjct: 177 IKRRPPWQICSKFGALPFVAEKPSRTTSW 205
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,470,467
Number of Sequences: 237096
Number of extensions: 823647
Number of successful extensions: 1421
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1421
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2928276690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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