Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_L23
         (401 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical pr...   101   3e-22
Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical pr...    95   2e-20
AL117203-1|CAB55099.1|  115|Caenorhabditis elegans Hypothetical ...    29   1.7  

>Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical
           protein W01D2.1 protein.
          Length = 92

 Score =  101 bits (241), Expect = 3e-22
 Identities = 43/82 (52%), Positives = 55/82 (67%)
 Frame = +2

Query: 47  QASVSAEIRPIRYARRCGXSSYHIQKSKCAQCGYPAAKLRSYHWSVKAKRXKTTGTGRMR 226
           QA     ++     +RCG SS+HIQK +CA CGYP AK R+Y+W  K+ R +TTGTGR R
Sbjct: 6   QAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYPDAKKRTYNWGAKSIRRRTTGTGRTR 65

Query: 227 HLKIVRRRFRNGFKEGKPTPPK 292
           HL+ V  RFRNGF+EG    P+
Sbjct: 66  HLRDVNARFRNGFREGTTPKPR 87



 Score = 34.7 bits (76), Expect = 0.025
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = +1

Query: 31 MTKGTSSFGKRRNKTHTLCTK 93
          MTKGT +FGK+  K+HTLC +
Sbjct: 1  MTKGTQAFGKKHVKSHTLCKR 21


>Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical
           protein C54C6.1 protein.
          Length = 91

 Score = 94.7 bits (225), Expect = 2e-20
 Identities = 41/80 (51%), Positives = 52/80 (65%)
 Frame = +2

Query: 47  QASVSAEIRPIRYARRCGXSSYHIQKSKCAQCGYPAAKLRSYHWSVKAKRXKTTGTGRMR 226
           QA     ++     +RCG SS+HIQK +CA CGY  AK R+Y+W  K+ R +TTGTGR R
Sbjct: 6   QAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTGTGRTR 65

Query: 227 HLKIVRRRFRNGFKEGKPTP 286
           HL+ V  RFRNGF+   P P
Sbjct: 66  HLRDVNARFRNGFRGTTPKP 85



 Score = 34.7 bits (76), Expect = 0.025
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = +1

Query: 31 MTKGTSSFGKRRNKTHTLCTK 93
          MTKGT +FGK+  K+HTLC +
Sbjct: 1  MTKGTQAFGKKHVKSHTLCKR 21


>AL117203-1|CAB55099.1|  115|Caenorhabditis elegans Hypothetical
           protein Y48C3A.1 protein.
          Length = 115

 Score = 28.7 bits (61), Expect = 1.7
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -1

Query: 98  HIFVHNVWVLFRRLPKLEVPFVIVVTR 18
           H FV+N+ ++FR+ PK+     I V R
Sbjct: 29  HFFVYNLILIFRKFPKINAILKITVDR 55


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,489,084
Number of Sequences: 27780
Number of extensions: 129345
Number of successful extensions: 301
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 301
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 630384202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)