Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_L14
         (583 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0040 - 304439-304482,304589-304652,304766-304831,305509-30...    40   0.001
12_01_0039 - 319871-319914,320021-320084,320198-320263,320397-32...    40   0.002
08_02_0210 + 14324539-14324609,14324735-14325740,14325838-143273...    33   0.17 
01_06_1808 - 40023533-40023966,40024078-40024204                       29   2.7  
07_03_0512 - 18954515-18955972                                         28   6.2  
05_03_0096 + 8356109-8356231,8356291-8356605                           27   8.2  

>11_01_0040 -
           304439-304482,304589-304652,304766-304831,305509-305640,
           305744-305804,305885-306018,306310-306654
          Length = 281

 Score = 39.9 bits (89), Expect = 0.001
 Identities = 22/65 (33%), Positives = 33/65 (50%)
 Frame = +3

Query: 219 LASLYLKRSYHYLLSASYFNNYXTNREGFAKLFRKLSDDSWEKTIGLIKHVTXRGGKMDF 398
           L S+    SY Y    +YF+      +GFAK F++ SD+  +    LIK+   RGG++  
Sbjct: 130 LCSVEYNASYAYHSLFAYFDRDNVALKGFAKFFKESSDEERDHAEKLIKYQNMRGGRVRL 189

Query: 399 SSHTT 413
            S  T
Sbjct: 190 QSIVT 194


>12_01_0039 -
           319871-319914,320021-320084,320198-320263,320397-320458,
           321211-321298,321401-321461,321542-321625,322332-322630
          Length = 255

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 28/103 (27%), Positives = 49/103 (47%)
 Frame = +3

Query: 243 SYHYLLSASYFNNYXTNREGFAKLFRKLSDDSWEKTIGLIKHVTXRGGKMDFSSHTTLKG 422
           SY Y    +YF+      +GFAK F++ SD+  +    L+K+   RGG++   S  T   
Sbjct: 106 SYAYHSLFAYFDRDNVALKGFAKFFKESSDEERDHAEKLMKYQNMRGGRVRLQSIVTPLT 165

Query: 423 DKGSNYTVEVGHEIGALAKALDTXKQLAERIFFIHREVTKNSD 551
           +       E G  + A+  AL   K + E++  +H   ++ +D
Sbjct: 166 EFDH---PEKGDALYAMELALALEKLVNEKLHNLHSVASRCND 205


>08_02_0210 +
           14324539-14324609,14324735-14325740,14325838-14327390,
           14327473-14327601,14328345-14328510
          Length = 974

 Score = 33.1 bits (72), Expect = 0.17
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = +1

Query: 16  IRH*INRIKYEGVCSHRCLSGSGCAGRGRLMLSERRPRHADGL*VC 153
           IRH +N  K+   C    +SG  C     L++S R PR AD L  C
Sbjct: 739 IRHRVNLAKHTCTCREWQVSGKPCPHALALIISTRNPRMADYLDPC 784


>01_06_1808 - 40023533-40023966,40024078-40024204
          Length = 186

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -3

Query: 140 PSACLGRRSDSMSLPRPAHPEPDRQR*EHTPSYLMR 33
           PS+     S S +LP PA P P  Q+    P++ MR
Sbjct: 132 PSSSASAASTSSALPAPAPPPPPSQQQPPLPAFSMR 167


>07_03_0512 - 18954515-18955972
          Length = 485

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
 Frame = -2

Query: 264 PTGDNGRNVSNTVR---LMPSVRSLQRGCP*IGRNTRCSAADLKSVC 133
           P G +G+   + V    L  +VRSL      +GR  R  AA++K+VC
Sbjct: 408 PLGVDGKRRDSFVEAAELERAVRSLMDDASEVGRKVREKAAEMKAVC 454


>05_03_0096 + 8356109-8356231,8356291-8356605
          Length = 145

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -3

Query: 137 SACLGRRSDSMSLPRPAHPEPDRQR 63
           SAC GR   +  LPRP H  P R R
Sbjct: 14  SACAGRLRAAACLPRPPHRCPVRPR 38


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,975,125
Number of Sequences: 37544
Number of extensions: 283508
Number of successful extensions: 813
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1364465340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)