Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_L14
         (583 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    23   5.5  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   9.5  

>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 4   FFPRIRH*INRIKYEGVCSHRCLS 75
           +  RI H I+R      CSH CL+
Sbjct: 114 YLVRINHRIDRFSKIYCCSHLCLA 137


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 19/97 (19%), Positives = 37/97 (38%)
 Frame = +3

Query: 237 KRSYHYLLSASYFNNYXTNREGFAKLFRKLSDDSWEKTIGLIKHVTXRGGKMDFSSHTTL 416
           +R++H  L +++ + +   R    +L +      W++ +G     T          HT  
Sbjct: 296 QRAFHTDLYSTFRDEFKVARNALKRLIKHTRQRKWKEFLG-----TANNASFGIVYHTFK 350

Query: 417 KGDKGSNYTVEVGHEIGALAKALDTXKQLAERIFFIH 527
           K  +GS         IG     LD  +++   +F  H
Sbjct: 351 KVAEGS---------IGPRTMTLDEFREVVSELFPTH 378


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 544,600
Number of Sequences: 2352
Number of extensions: 9244
Number of successful extensions: 15
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)