Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_L14
         (583 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF106592-2|AAK21364.1|  170|Caenorhabditis elegans Ferritin prot...    32   0.34 
AF016447-16|AAG24016.1|  170|Caenorhabditis elegans Ferritin pro...    28   5.6  
Z70780-10|CAA94827.1|  330|Caenorhabditis elegans Hypothetical p...    27   9.7  
AC024857-1|AAK31566.2|  869|Caenorhabditis elegans Temporarily a...    27   9.7  

>AF106592-2|AAK21364.1|  170|Caenorhabditis elegans Ferritin protein
           2 protein.
          Length = 170

 Score = 31.9 bits (69), Expect = 0.34
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = +3

Query: 225 SLYLKRSYHYLLSASYFNNYXTNREGFAKLFRKLSDDSWEKTIGLIKHVTXRGGKM 392
           ++ L  SY YL  + YF+         AK F++ SD+  E    L++    RGG++
Sbjct: 21  NIELYASYVYLSMSFYFDRDDVALPNIAKFFKEQSDEEREHATELMRVQNLRGGRV 76


>AF016447-16|AAG24016.1|  170|Caenorhabditis elegans Ferritin
           protein 1 protein.
          Length = 170

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = +3

Query: 234 LKRSYHYLLSASYFNNYXTNREGFAKLFRKLSDDSWEKTIGLIKHVTXRGGKM 392
           L  SY YL  +++F+         AK F++ SD+       L++    RGG++
Sbjct: 24  LYASYVYLSMSAHFDRDDIALRNIAKFFKEQSDEERGHATELMRIQAVRGGRV 76


>Z70780-10|CAA94827.1|  330|Caenorhabditis elegans Hypothetical
           protein F46B6.11 protein.
          Length = 330

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 35  ASNMKVYALIVACLALGVLAEEDSCY 112
           +SN+  Y  ++ C+AL V A   SCY
Sbjct: 275 SSNLYAYMFLLRCIALDVRAHIVSCY 300


>AC024857-1|AAK31566.2|  869|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 305 protein.
          Length = 869

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 17/58 (29%), Positives = 30/58 (51%)
 Frame = +3

Query: 393 DFSSHTTLKGDKGSNYTVEVGHEIGALAKALDTXKQLAERIFFIHREVTKNSDLLHDA 566
           D S+HTT      S  TVE  H++ ++A ++ T  +  E + FI  +  + + L+  A
Sbjct: 627 DSSAHTT----PISTRTVESKHDVTSMASSVSTWHEEIEALAFIDGDADEKAMLVQPA 680


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,048,727
Number of Sequences: 27780
Number of extensions: 220717
Number of successful extensions: 579
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 579
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)