Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_L13
         (647 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9Y296 Cluster: Trafficking protein particle complex su...    95   2e-18
UniRef50_A7RYC9 Cluster: Predicted protein; n=1; Nematostella ve...    94   3e-18
UniRef50_Q5DF44 Cluster: SJCHGC05124 protein; n=2; Schistosoma j...    73   5e-12
UniRef50_Q20100 Cluster: Putative uncharacterized protein; n=2; ...    73   5e-12
UniRef50_Q4XM37 Cluster: Putative uncharacterized protein; n=2; ...    35   1.5  
UniRef50_Q11XR3 Cluster: Putative uncharacterized protein; n=1; ...    34   3.4  
UniRef50_A5DRG3 Cluster: Putative uncharacterized protein; n=1; ...    34   3.4  
UniRef50_A2F6J7 Cluster: Putative uncharacterized protein; n=1; ...    33   7.9  

>UniRef50_Q9Y296 Cluster: Trafficking protein particle complex
           subunit 4; n=34; Coelomata|Rep: Trafficking protein
           particle complex subunit 4 - Homo sapiens (Human)
          Length = 219

 Score = 94.7 bits (225), Expect = 2e-18
 Identities = 43/90 (47%), Positives = 60/90 (66%)
 Frame = +1

Query: 373 KRLDFPLHIKLXYENKKVVVAFGQRDGINVGHVLLSVNGSPVTGXTTEDNXXVFXIIQAK 552
           K   +PL + L   +++V+VAFGQRDGI VGH +L++NG  V G  T D   V   +   
Sbjct: 30  KTFSYPLDLLLKLHDERVLVAFGQRDGIRVGHAVLAINGMDVNGRYTADGKEVLEYLGNP 89

Query: 553 ENYPLSLKFGTVRATTNEKIVLASMFYPLF 642
            NYP+S++FG  R T+NEK++LASMF+ LF
Sbjct: 90  ANYPVSIRFGRPRLTSNEKLMLASMFHSLF 119



 Score = 50.8 bits (116), Expect = 3e-05
 Identities = 20/36 (55%), Positives = 26/36 (72%)
 Frame = +3

Query: 285 MVIYGIYIVSKSGGLIYNYDHNIPRVETEKTFGFPL 392
           M I+ +Y+V+K+GGLIY  D   PR E EKTF +PL
Sbjct: 1   MAIFSVYVVNKAGGLIYQLDSYAPRAEAEKTFSYPL 36


>UniRef50_A7RYC9 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 222

 Score = 93.9 bits (223), Expect = 3e-18
 Identities = 45/95 (47%), Positives = 60/95 (63%)
 Frame = +1

Query: 358 ESRLRKRLDFPLHIKLXYENKKVVVAFGQRDGINVGHVLLSVNGSPVTGXTTEDNXXVFX 537
           +S + K   +PL I L  ++K  V+ FG RD + VGH LL++NG  V G    D   V  
Sbjct: 25  KSEVEKTYSYPLEITLRGDDKLEVI-FGARDNVKVGHSLLAINGENVVGRKLPDGTDVME 83

Query: 538 IIQAKENYPLSLKFGTVRATTNEKIVLASMFYPLF 642
            +  KENYP+SLKFG  +  TNE+I+LASMF+PLF
Sbjct: 84  FLANKENYPISLKFGRAKLKTNERIMLASMFHPLF 118



 Score = 51.2 bits (117), Expect = 2e-05
 Identities = 18/36 (50%), Positives = 29/36 (80%)
 Frame = +3

Query: 285 MVIYGIYIVSKSGGLIYNYDHNIPRVETEKTFGFPL 392
           M I+ +YI++++GGLIY++DH  P+ E EKT+ +PL
Sbjct: 1   MAIFSVYILNRAGGLIYHFDHYTPKSEVEKTYSYPL 36


>UniRef50_Q5DF44 Cluster: SJCHGC05124 protein; n=2; Schistosoma
           japonicum|Rep: SJCHGC05124 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 236

 Score = 73.3 bits (172), Expect = 5e-12
 Identities = 32/91 (35%), Positives = 53/91 (58%)
 Frame = +1

Query: 367 LRKRLDFPLHIKLXYENKKVVVAFGQRDGINVGHVLLSVNGSPVTGXTTEDNXXVFXIIQ 546
           + K+ ++PL       + +++V FG  D + +G+ ++SV+G    G   EDN  +  +  
Sbjct: 28  VEKKYEYPLPFHFKVVDGRLIVDFGACDDVKIGYTVISVDGVMAKGTFLEDNRDIMKVFS 87

Query: 547 AKENYPLSLKFGTVRATTNEKIVLASMFYPL 639
            K N+PL++KFG  R   N++I LASMF PL
Sbjct: 88  DKSNFPLTIKFGRPRLRPNDRIHLASMFQPL 118



 Score = 45.6 bits (103), Expect = 0.001
 Identities = 17/38 (44%), Positives = 27/38 (71%)
 Frame = +3

Query: 285 MVIYGIYIVSKSGGLIYNYDHNIPRVETEKTFGFPLAY 398
           M +YG+Y++S+SG L + YDH+   VE EK + +PL +
Sbjct: 1   MSVYGLYVISESGSLQFYYDHSDVNVEVEKKYEYPLPF 38


>UniRef50_Q20100 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 224

 Score = 73.3 bits (172), Expect = 5e-12
 Identities = 34/95 (35%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
 Frame = +1

Query: 367 LRKRLDFPLHIKLXYENKKVVVAFGQRDGINVGHVLLSVNGSPVTGXTTE---DNXXVFX 537
           + K  ++P+ + L   ++K VV FG++DGI + + + SVNG  V+G   +       V  
Sbjct: 30  VEKTYEWPIDVHLEEVDQKAVVVFGEKDGIKLRYYVKSVNGETVSGTRLQLGAQQVNVLE 89

Query: 538 IIQAKENYPLSLKFGTVRATTNEKIVLASMFYPLF 642
            +Q +++YP+++KF     +TNEKI+L+SMF+ LF
Sbjct: 90  YLQEEDHYPVTVKFAAPTVSTNEKIILSSMFHSLF 124


>UniRef50_Q4XM37 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 315

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = -1

Query: 398 ICKGKSKRFLSLDSRNIVI-IVVDETTRLANNINSVYNHFIXFFN-CSVXYTYALNVKCN 225
           I K K+ R+++  ++ I+  I++   T  +N  N +YN FI  FN     Y  ++N +  
Sbjct: 36  IYKSKNDRYITYKNKCIIYEILISTNTYYSNRTNQIYNIFIYLFNYIDDIYLKSMNEEIV 95

Query: 224 CEXYET 207
           C   ET
Sbjct: 96  CYPMET 101


>UniRef50_Q11XR3 Cluster: Putative uncharacterized protein; n=1;
           Cytophaga hutchinsonii ATCC 33406|Rep: Putative
           uncharacterized protein - Cytophaga hutchinsonii (strain
           ATCC 33406 / NCIMB 9469)
          Length = 401

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 23/71 (32%), Positives = 33/71 (46%)
 Frame = -1

Query: 404 NLICKGKSKRFLSLDSRNIVIIVVDETTRLANNINSVYNHFIXFFNCSVXYTYALNVKCN 225
           NL C G     L + S+N V+  +D ++ L  +I+   N  + F NCS     ALNV  N
Sbjct: 99  NLYCSGTQLTTLDV-SKNTVLNSLDCSSSLFQSIDVSANTDLEFLNCSFNSLTALNVTKN 157

Query: 224 CEXYETRSQTN 192
            +      Q N
Sbjct: 158 TKLMALNCQFN 168


>UniRef50_A5DRG3 Cluster: Putative uncharacterized protein; n=1;
           Pichia guilliermondii|Rep: Putative uncharacterized
           protein - Pichia guilliermondii (Yeast) (Candida
           guilliermondii)
          Length = 178

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = +3

Query: 285 MVIYGIYIVSKSGGLIYNYDHN 350
           M +Y IYI++KSGGLIY  D N
Sbjct: 1   MKVYSIYILNKSGGLIYQQDVN 22


>UniRef50_A2F6J7 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 1764

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 20/90 (22%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
 Frame = +1

Query: 127 QICTTIYISS---DIFNEVYVKLLKLVCERVSXISQLHLTFNAYVXKTLQLKXIIKWLYT 297
           +I T +Y+SS   ++ + + V+  +++C+R      L +  + Y  ++  L  + KW Y 
Sbjct: 441 RIMTNLYVSSYDTEVDSRLIVRSNEVICDRGPKTDVLTMASSIYYKESNSLANV-KWNYV 499

Query: 298 EFILLASLVVSSTTMITIFLESRLRKRLDF 387
            F     +  +   +  IF+++R   ++DF
Sbjct: 500 VFDADDYVTCNFPNIFKIFIDNRPEGKVDF 529


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 498,451,852
Number of Sequences: 1657284
Number of extensions: 8622279
Number of successful extensions: 23352
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 22367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23314
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)