Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_L13
         (647 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0242 + 15700336-15700401,15700481-15700649,15701828-15702024     30   1.8  
06_01_0367 - 2636487-2636498,2636655-2636724,2636831-2636937,263...    30   1.8  
05_03_0001 - 7269231-7269436,7269536-7270100,7270600-7270821,727...    27   9.7  

>07_03_0242 + 15700336-15700401,15700481-15700649,15701828-15702024
          Length = 143

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = +3

Query: 291 IYGIYIVSKSGGLIYNYDH 347
           IY ++I++KSGGLIY  D+
Sbjct: 6   IYSLFIINKSGGLIYYKDY 24


>06_01_0367 -
           2636487-2636498,2636655-2636724,2636831-2636937,
           2637208-2637226,2637383-2637470,2638175-2638303,
           2638428-2638506,2639658-2639720,2640437-2640535,
           2641583-2641740,2642926-2643094,2643174-2643239
          Length = 352

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = +3

Query: 291 IYGIYIVSKSGGLIYNYDH 347
           IY ++I++KSGGLIY  D+
Sbjct: 6   IYSLFIINKSGGLIYYKDY 24


>05_03_0001 -
           7269231-7269436,7269536-7270100,7270600-7270821,
           7270913-7271155,7271227-7271481,7272017-7272370,
           7273082-7273164,7273250-7273630,7273874-7274027
          Length = 820

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 17/61 (27%), Positives = 31/61 (50%)
 Frame = -1

Query: 470 TCPTFIPSLWPNATTTFLFSXCNLICKGKSKRFLSLDSRNIVIIVVDETTRLANNINSVY 291
           TCP +            +    +L+ K  ++  L L+ +N V+I+ DE   LA+++ S+Y
Sbjct: 259 TCPYYGARDMVRTADLVVLPYQSLLLKS-ARESLGLNLKNSVVII-DEAHNLADSLTSMY 316

Query: 290 N 288
           N
Sbjct: 317 N 317


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,720,357
Number of Sequences: 37544
Number of extensions: 211868
Number of successful extensions: 449
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 449
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)