Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_L12
(634 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158; Eukar... 279 5e-74
UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56; Fu... 277 2e-73
UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p ... 276 4e-73
UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1; Aspergi... 220 2e-56
UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1... 207 2e-52
UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=... 196 3e-49
UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=... 194 1e-48
UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101, w... 189 4e-47
UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S riboso... 174 1e-42
UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4; Eukaryo... 169 6e-41
UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep: R... 159 5e-38
UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lambl... 133 4e-30
UniRef50_UPI00005BFE3C Cluster: PREDICTED: hypothetical protein;... 126 4e-28
UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417... 124 2e-27
UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;... 107 3e-22
UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella ve... 103 4e-21
UniRef50_UPI00015533B4 Cluster: PREDICTED: similar to ribosomal ... 95 2e-18
UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella... 87 3e-16
UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 87 3e-16
UniRef50_P54030 Cluster: 50S ribosomal protein L11P; n=16; Archa... 87 4e-16
UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1; ... 85 1e-15
UniRef50_P35025 Cluster: 50S ribosomal protein L11P; n=15; Archa... 82 1e-14
UniRef50_P62445 Cluster: 50S ribosomal protein L11P; n=9; Archae... 77 3e-13
UniRef50_Q97BN1 Cluster: 50S ribosomal protein L11P; n=4; Euryar... 74 2e-12
UniRef50_P62446 Cluster: 50S ribosomal protein L11P; n=1; Nanoar... 70 5e-11
UniRef50_A2AB20 Cluster: Kinesin family member C1; n=3; Catarrhi... 54 4e-06
UniRef50_Q2S1Q1 Cluster: 50S ribosomal protein L11; n=3; Bacteri... 48 1e-04
UniRef50_Q8FSA7 Cluster: 50S ribosomal protein L11; n=616; cellu... 47 3e-04
UniRef50_P05969 Cluster: 50S ribosomal protein L11P; n=7; Haloba... 45 0.001
UniRef50_O83265 Cluster: 50S ribosomal protein L11; n=5; Bacteri... 42 0.016
UniRef50_Q7VRP3 Cluster: 50S ribosomal protein L11; n=4; Bacteri... 39 0.11
UniRef50_A3B9H4 Cluster: Putative uncharacterized protein; n=3; ... 38 0.26
UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1; ... 36 0.61
UniRef50_Q2J5H8 Cluster: Ribosomal protein L11; n=1; Frankia sp.... 35 1.4
UniRef50_A4ECY6 Cluster: Putative uncharacterized protein; n=1; ... 34 3.3
UniRef50_Q9VGN4 Cluster: CG31374-PB, isoform B; n=4; Sophophora|... 34 3.3
UniRef50_Q21QS4 Cluster: Major facilitator superfamily MFS_1; n=... 33 4.3
UniRef50_UPI00006615FB Cluster: Homolog of Homo sapiens "Splice ... 33 7.5
UniRef50_Q89W61 Cluster: 30S ribosomal protein S20; n=12; Alphap... 32 10.0
>UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158;
Eukaryota|Rep: 60S ribosomal protein L12 - Homo sapiens
(Human)
Length = 165
Score = 279 bits (683), Expect = 5e-74
Identities = 128/159 (80%), Positives = 148/159 (93%)
Frame = +1
Query: 127 PPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQ 306
PPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+
Sbjct: 2 PPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVK 61
Query: 307 LTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAXIMRNRSM 486
LT+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ ++++ IA MR+RS+
Sbjct: 62 LTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSL 121
Query: 487 ARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGAL 603
AR LSG++KEILGTAQSVGC V+GR PHD+IDDINSGA+
Sbjct: 122 ARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAV 160
>UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56;
Fungi/Metazoa group|Rep: Ribosomal protein L12 variant -
Homo sapiens (Human)
Length = 197
Score = 277 bits (679), Expect = 2e-73
Identities = 127/159 (79%), Positives = 147/159 (92%)
Frame = +1
Query: 127 PPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQ 306
PPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+
Sbjct: 34 PPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVK 93
Query: 307 LTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAXIMRNRSM 486
LT+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ ++++ I MR+RS+
Sbjct: 94 LTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIVRQMRHRSL 153
Query: 487 ARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGAL 603
AR LSG++KEILGTAQSVGC V+GR PHD+IDDINSGA+
Sbjct: 154 ARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAV 192
>UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p -
Drosophila melanogaster (Fruit fly)
Length = 307
Score = 276 bits (676), Expect = 4e-73
Identities = 126/164 (76%), Positives = 147/164 (89%)
Frame = +1
Query: 118 TKCPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKI 297
T PPKFDP E+K+V LRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIAKATSDWKGLKI
Sbjct: 141 TAMPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKI 200
Query: 298 TVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAXIMRN 477
TV LT+QNRQA I+VVPSAA+LII+ALKEPPRDRKKQKNIKH+GNI ED++ IA +MR
Sbjct: 201 TVCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVMRP 260
Query: 478 RSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGALTI 609
RSMAR L G+ KE+LGTAQSVGCTV+G+ PHD+ID++N G++ +
Sbjct: 261 RSMARELKGTCKEVLGTAQSVGCTVDGKHPHDVIDELNEGSIEV 304
>UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1;
Aspergillus terreus NIH2624|Rep: 60S ribosomal protein
L12 - Aspergillus terreus (strain NIH 2624)
Length = 189
Score = 220 bits (538), Expect = 2e-56
Identities = 109/185 (58%), Positives = 139/185 (75%), Gaps = 24/185 (12%)
Frame = +1
Query: 127 PPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDW-------- 282
PPKFDPNE+K+++LR GGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DW
Sbjct: 2 PPKFDPNEVKVIHLRVTGGEVGAQSALAPKIGPLGLSPKKIGEDIAKNTGDWVSTQYGCC 61
Query: 283 ----------------KGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKN 414
KGL++TV+LT+QNRQA ++VVPSA++L+I+ALKEPPRDRKK+KN
Sbjct: 62 DARKEQWLTWTVSAVQKGLRVTVKLTIQNRQAAVSVVPSASSLVIKALKEPPRDRKKEKN 121
Query: 415 IKHNGNISLEDVIGIAXIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINS 594
IKHN +I L+D+I IA MR+RS+A+ L G+V EILGTA SVGC V+GR P D+ DD+ +
Sbjct: 122 IKHNKSIPLDDIIEIARTMRSRSLAKELKGTVLEILGTAFSVGCQVDGRSPKDVSDDVKA 181
Query: 595 GALTI 609
G + I
Sbjct: 182 GEIDI 186
>UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1;
Ostreococcus tauri|Rep: Putative 60S ribosomal protein
L12 - Ostreococcus tauri
Length = 230
Score = 207 bits (505), Expect = 2e-52
Identities = 98/144 (68%), Positives = 122/144 (84%), Gaps = 1/144 (0%)
Frame = +1
Query: 121 KCPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATS-DWKGLKI 297
K PPKFDPN + +R GGEVGA SSLAPKIGPLGLSPKKVG+DIAK T+ DWKGL++
Sbjct: 62 KMPPKFDPNATLEIFMRATGGEVGAASSLAPKIGPLGLSPKKVGEDIAKETAKDWKGLRV 121
Query: 298 TVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAXIMRN 477
TV+LTVQNRQA+++VVP+A+AL+I+ALKEP +DRKK K I H GN SL+D+I +A +MR
Sbjct: 122 TVKLTVQNRQAKVSVVPTASALVIKALKEPFQDRKKVKGITHTGNCSLDDIIEVARVMRP 181
Query: 478 RSMARYLSGSVKEILGTAQSVGCT 549
+S A+ L+G+VKEILGTA+SVGCT
Sbjct: 182 KSCAKNLAGTVKEILGTAKSVGCT 205
>UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=3;
Trypanosoma|Rep: 60S ribosomal protein L12, putative -
Trypanosoma brucei
Length = 219
Score = 196 bits (479), Expect = 3e-49
Identities = 91/163 (55%), Positives = 118/163 (72%)
Frame = +1
Query: 121 KCPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKIT 300
K PPKFDPN+ V +R VGGEV AT+SLAPK+GPLGL+ KK+G+DIAK+T DWKGLK+T
Sbjct: 55 KMPPKFDPNQEITVVVRAVGGEVPATASLAPKVGPLGLNAKKIGEDIAKSTKDWKGLKVT 114
Query: 301 VQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAXIMRNR 480
QL V+NR A + V PS A+ +IRALKEPPRDRKK KNIKH+GNI+ +++ IA
Sbjct: 115 CQLRVKNRVATVIVTPSVASRLIRALKEPPRDRKKVKNIKHDGNIAFSEILKIAKESAPN 174
Query: 481 SMARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGALTI 609
SM + V E+LGTA S+GCT++G P + + + G L +
Sbjct: 175 SMGASMKSVVMEVLGTAVSIGCTIDGEHPRAIQEKVQEGKLKV 217
>UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L12, putative -
Plasmodium chabaudi
Length = 177
Score = 194 bits (474), Expect = 1e-48
Identities = 88/152 (57%), Positives = 119/152 (78%)
Frame = +1
Query: 160 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIA 339
V +R VGGEVGA+S L+PK+GPLGLSPKK+GDDIAK T WKGLKI V+LT+QNRQA+I
Sbjct: 25 VYIRQVGGEVGASSVLSPKLGPLGLSPKKIGDDIAKETQSWKGLKICVKLTIQNRQAKIE 84
Query: 340 VVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAXIMRNRSMARYLSGSVKEI 519
VVP++A+++++ L E PRDRKK KNIKHNGN+ +E V IA M+ +S A+ G+VKEI
Sbjct: 85 VVPTSASMVLKELNEAPRDRKKVKNIKHNGNLKIEQVYSIARAMKEKSRAKEFRGTVKEI 144
Query: 520 LGTAQSVGCTVEGRPPHDLIDDINSGALTIDE 615
LGT S+GCTV+G+ P + + I++G + + +
Sbjct: 145 LGTCNSIGCTVDGKKPTTIQEMIDNGDIDVPD 176
>UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 164
Score = 189 bits (461), Expect = 4e-47
Identities = 81/163 (49%), Positives = 122/163 (74%)
Frame = +1
Query: 127 PPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQ 306
PPK DPNE++++N++ GGE G S+LAPK+GPLGL+PK+VGD I + WKG+++ V
Sbjct: 2 PPKVDPNEVRLINIKVFGGEGGPASTLAPKLGPLGLNPKQVGDKIIAESGKWKGIRVMVN 61
Query: 307 LTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAXIMRNRSM 486
L QNR A + V+P+++AL+I+ + RDRKK KN+KHNGN++LE VI +A + +S+
Sbjct: 62 LRCQNRNADVTVIPTSSALLIKEIGGYERDRKKTKNVKHNGNLTLEQVIKVARAVEEKSL 121
Query: 487 ARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGALTIDE 615
A+ +G+VK++LGTAQS+G TV+G+P +I INSG L +++
Sbjct: 122 AKTFTGTVKQVLGTAQSLGATVDGQPVKAIIGKINSGELKVEK 164
>UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S ribosomal
protein L12; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 60S ribosomal protein L12 - Macaca mulatta
Length = 268
Score = 174 bits (424), Expect = 1e-42
Identities = 94/158 (59%), Positives = 113/158 (71%)
Frame = +1
Query: 130 PKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQL 309
PKF P EIK+ LRC G EV A S+LAPKI PLGLSPK KG
Sbjct: 131 PKFGPKEIKVAYLRCTGDEVSAMSALAPKISPLGLSPK-------------KG------- 170
Query: 310 TVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAXIMRNRSMA 489
QAQI VVPSA+ALII+ALKEP RDRKKQKNIKH+GNI+ ++++ IA MR+RS+
Sbjct: 171 -----QAQIEVVPSASALIIKALKEPARDRKKQKNIKHSGNITSDEIVNIARQMRHRSLD 225
Query: 490 RYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGAL 603
R LSG++KE+LGTAQS+GC V+GR PH +IDDINSGA+
Sbjct: 226 RELSGTIKELLGTAQSLGCNVDGRHPHKIIDDINSGAV 263
>UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4;
Eukaryota|Rep: 60S ribosomal protein L12 -
Encephalitozoon cuniculi
Length = 166
Score = 169 bits (410), Expect = 6e-41
Identities = 84/161 (52%), Positives = 122/161 (75%), Gaps = 2/161 (1%)
Frame = +1
Query: 139 DPNEIKIVNLRCVGGEV-GATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV 315
DP + K + L+ VGGEV GAT LA ++GPLGLS K VG+DI KAT+D+K LK+ VQL +
Sbjct: 8 DP-DTKYIKLQVVGGEVPGAT--LAQRVGPLGLSSKVVGEDIKKATADYKSLKVHVQLAI 64
Query: 316 QNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAXIMR-NRSMAR 492
++R+A + V PS A LII++LKEPPRDRKK+KNI HNG++ + +V+ IA I R +RS +
Sbjct: 65 KDRKATVEVQPSVATLIIKSLKEPPRDRKKEKNILHNGSLRMTEVVDIARIARSSRSYSN 124
Query: 493 YLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGALTIDE 615
LSG+VKE+LGT +S+GC V+G+ P ++ +I++G + + +
Sbjct: 125 SLSGTVKEVLGTCKSIGCKVDGKCPKEVTREIDAGEIKLPD 165
>UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep:
Rpl12 protein - Mus musculus (Mouse)
Length = 218
Score = 159 bits (386), Expect = 5e-38
Identities = 75/85 (88%), Positives = 81/85 (95%)
Frame = +1
Query: 160 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIA 339
V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+LT+QNRQAQI
Sbjct: 106 VYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIE 165
Query: 340 VVPSAAALIIRALKEPPRDRKKQKN 414
VVPSA+ALII+ALKEPPRDRKKQKN
Sbjct: 166 VVPSASALIIKALKEPPRDRKKQKN 190
>UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_243_12971_12423 - Giardia lamblia
ATCC 50803
Length = 182
Score = 133 bits (321), Expect = 4e-30
Identities = 66/167 (39%), Positives = 107/167 (64%), Gaps = 4/167 (2%)
Frame = +1
Query: 127 PPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQ 306
PP+ DPN ++ LR GG + A ++L PKIGP GL PK VG+ I +AT +KG+++ V+
Sbjct: 2 PPRADPNAEIVLYLRVKGGIIPAPNALGPKIGPYGLPPKVVGEKIHEATQGYKGIRVKVR 61
Query: 307 LTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAXIMRNRSM 486
+ +NRQ ++VVP+A++L+++AL E PR K + + H G + + V+ IA +R S
Sbjct: 62 IVSKNRQPTVSVVPTASSLLVKALGEGPRTIPKGQPLLHTGTVKFDTVLDIAKELRANSF 121
Query: 487 ARYLSGSVKEILGTAQSVGCTVEGR----PPHDLIDDINSGALTIDE 615
A +G+V E+LG+A+SVGC VE + P ++ + + +G + I E
Sbjct: 122 ALKYAGTVLEVLGSARSVGCKVEYKGTVYSPAEITEMVKAGDIEIPE 168
>UniRef50_UPI00005BFE3C Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 255
Score = 126 bits (304), Expect = 4e-28
Identities = 56/77 (72%), Positives = 69/77 (89%)
Frame = +1
Query: 373 ALKEPPRDRKKQKNIKHNGNISLEDVIGIAXIMRNRSMARYLSGSVKEILGTAQSVGCTV 552
A KEPPRDRKKQKNIKH+GNI+ ++++ IA MR+RS+AR LSG++KEILGTAQSVGC V
Sbjct: 174 AKKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNV 233
Query: 553 EGRPPHDLIDDINSGAL 603
+GR PHD+IDDINSGA+
Sbjct: 234 DGRHPHDIIDDINSGAV 250
>UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417C
precursor; n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YDR417C precursor -
Saccharomyces cerevisiae (Baker's yeast)
Length = 123
Score = 124 bits (299), Expect = 2e-27
Identities = 62/103 (60%), Positives = 70/103 (67%)
Frame = -3
Query: 434 MLPLCLIFFCFLRSRGGSLRALMIRAAAEGTTAIWACLF*TVSCTVILRPFQSLVALAMS 255
MLPLCL F F S GGS +A+M + A+GTT ACLF + TV L P SLVALA+S
Sbjct: 1 MLPLCLTFLSFFLSLGGSFKAVMTKEEADGTTEAAACLFWIFNWTVTLIPLNSLVALAIS 60
Query: 254 SPTFLGDRPRGPILGAKDDVAPTSPPTHRKFTILISFGSNLGG 126
SPTF GD+P GPI GAK APTSPPT K+ L SFGSN GG
Sbjct: 61 SPTFFGDKPNGPIFGAKAAEAPTSPPTALKYKYLTSFGSNFGG 103
>UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;
n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
- Equus caballus
Length = 169
Score = 107 bits (256), Expect = 3e-22
Identities = 57/130 (43%), Positives = 81/130 (62%)
Frame = -2
Query: 522 KNLFY*ARKVPGH*SVSHDXRNSDYILKGDVAVVFDIFLLFTITRRLLKGSDDKGCCRGN 343
++LF +R+ G V H N D ++KGDV+ V +FLL +++ L+G DD+G R
Sbjct: 17 QDLFNGSREFSGQRLVLHLSSNVDNLIKGDVSTVLYVFLLLSVSWWFLEGFDDQGRGRRY 76
Query: 342 NSYLGLSVLNCQLHSDLETLPVTCGLGNVITHLFRRQTKRTDFRGQR*CGTDFPADTSQI 163
+ L LSVL+ Q HSD +TLP+T LG+VI HLF RQT+ + GQ GTD P Q+
Sbjct: 77 HLNLSLSVLDRQFHSDPQTLPITSCLGDVIAHLFWRQTQGANLGGQGRRGTDVPTGAPQV 136
Query: 162 HDFNFIWVKL 133
HDF+ + V+L
Sbjct: 137 HDFDLVGVEL 146
>UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 136
Score = 103 bits (247), Expect = 4e-21
Identities = 45/68 (66%), Positives = 58/68 (85%)
Frame = +1
Query: 412 NIKHNGNISLEDVIGIAXIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDIN 591
++KHNGNI+L+DV +A +MR RSMAR+LSG+VKEILGT QSVGCTV+G PHD+ID IN
Sbjct: 67 SVKHNGNITLDDVTNVAKVMRPRSMARHLSGTVKEILGTCQSVGCTVDGMAPHDVIDKIN 126
Query: 592 SGALTIDE 615
SG + I++
Sbjct: 127 SGEIEIED 134
Score = 64.9 bits (151), Expect = 2e-09
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = +1
Query: 127 PPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGL 234
PPKF+ NEI+ V LRC GGEVGAT+SLAPKIGPLGL
Sbjct: 2 PPKFELNEIQYVYLRCTGGEVGATASLAPKIGPLGL 37
>UniRef50_UPI00015533B4 Cluster: PREDICTED: similar to ribosomal
protein L12; n=1; Mus musculus|Rep: PREDICTED: similar
to ribosomal protein L12 - Mus musculus
Length = 142
Score = 94.7 bits (225), Expect = 2e-18
Identities = 42/68 (61%), Positives = 56/68 (82%)
Frame = +1
Query: 400 KKQKNIKHNGNISLEDVIGIAXIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLI 579
K QK+IKH+G+IS ++ + MR+RS+AR LSG++KEILGT+QSVGC V+G PHD+I
Sbjct: 70 KNQKSIKHSGSISFDEFVNTVWQMRHRSLARELSGTIKEILGTSQSVGCNVDGCHPHDII 129
Query: 580 DDINSGAL 603
DDINSGA+
Sbjct: 130 DDINSGAV 137
>UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella
natans|Rep: Ribosomal protein L2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 153
Score = 87.4 bits (207), Expect = 3e-16
Identities = 46/135 (34%), Positives = 82/135 (60%), Gaps = 1/135 (0%)
Frame = +1
Query: 154 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATS-DWKGLKITVQLTVQNRQA 330
K+V ++ GG+V + S LA KIGP GLSPKK+G+D AK T +W G+ +T++LT+ + A
Sbjct: 7 KVVYIKSKGGQVASASVLAQKIGPYGLSPKKIGEDFAKKTKKNWDGIIVTIKLTIIKKNA 66
Query: 331 QIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAXIMRNRSMARYLSGSV 510
+ +VPS ++L+ R ++ + ++ + +I I+ ++ +S ++ G V
Sbjct: 67 YLKIVPSVSSLLKREMQLYGKPSV----------LTFKQLIKISKKVQTKSYSKAFKGVV 116
Query: 511 KEILGTAQSVGCTVE 555
KE+LGT S+G ++
Sbjct: 117 KEVLGTCCSMGILID 131
>UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 202
Score = 87.0 bits (206), Expect = 3e-16
Identities = 50/162 (30%), Positives = 89/162 (54%)
Frame = -2
Query: 618 LFINGQSSAVDVINKIMWRPALHSTSN*LCCAKNLFY*ARKVPGH*SVSHDXRNSDYILK 439
+F N ++VD + ++W +++T++ L ++ +V SH N D + +
Sbjct: 16 VFWNFNFTSVDSFDDVVWVLVVNTTTDGLSSTQDFLGDRSQVLTERLFSHLLSNFDDVFQ 75
Query: 438 GDVAVVFDIFLLFTITRRLLKGSDDKGCCRGNNSYLGLSVLNCQLHSDLETLPVTCGLGN 259
V VFD+ +L +++ L+ D++ NN LSVL+ QL+S+L+TL + GLG+
Sbjct: 76 LQVTTVFDVLVLLSVSWWFLQSGDNQRGSGWNNRSSSLSVLDLQLNSNLDTLEILGGLGD 135
Query: 258 VITHLFRRQTKRTDFRGQR*CGTDFPADTSQIHDFNFIWVKL 133
+ T+L QT+ T+ Q T+F D+SQ+ +FIW+KL
Sbjct: 136 IFTNLLWGQTQWTNLWSQSSGSTNFTTDSSQVQVLDFIWIKL 177
>UniRef50_P54030 Cluster: 50S ribosomal protein L11P; n=16;
Archaea|Rep: 50S ribosomal protein L11P - Methanococcus
jannaschii
Length = 161
Score = 86.6 bits (205), Expect = 4e-16
Identities = 50/151 (33%), Positives = 89/151 (58%), Gaps = 3/151 (1%)
Frame = +1
Query: 154 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV--QNRQ 327
++V + GG A L P IGPLG++ +V +I + T D++G+++ V++ V + R+
Sbjct: 4 EVVEVLVTGGRATAGPPLGPAIGPLGVNVMQVVKEINEKTKDYEGMQVPVKVIVDTETRK 63
Query: 328 AQIAV-VPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAXIMRNRSMARYLSG 504
+I V +P ALI + L + + + GN++LE VI IA + ++ ++ L
Sbjct: 64 FEIEVGIPPTTALIKKELGIETAAHEPRHEVV--GNLTLEQVIKIAKMKKDAMLSYTLKN 121
Query: 505 SVKEILGTAQSVGCTVEGRPPHDLIDDINSG 597
+VKE+LGT S+G TVEG+ P ++ +I++G
Sbjct: 122 AVKEVLGTCGSMGVTVEGKDPKEVQKEIDAG 152
>UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 84
Score = 85.0 bits (201), Expect = 1e-15
Identities = 39/52 (75%), Positives = 45/52 (86%)
Frame = +1
Query: 157 IVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLT 312
IV +R VGGEVGA+S L+PK+GPLGLSPKK+GDDIAK T WKGLKI V+LT
Sbjct: 33 IVYIRQVGGEVGASSVLSPKLGPLGLSPKKIGDDIAKETQSWKGLKICVKLT 84
>UniRef50_P35025 Cluster: 50S ribosomal protein L11P; n=15;
Archaea|Rep: 50S ribosomal protein L11P - Sulfolobus
acidocaldarius
Length = 170
Score = 81.8 bits (193), Expect = 1e-14
Identities = 47/152 (30%), Positives = 84/152 (55%), Gaps = 4/152 (2%)
Frame = +1
Query: 154 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKI--TVQLTVQNRQ 327
K + + GG L P + LGL+ ++V I T+ +KG+ + T+++ ++
Sbjct: 4 KTIKIMVEGGSAKPGPPLGPTLSQLGLNVQEVVKKINDVTAQFKGMSVPVTIEIDSSTKK 63
Query: 328 AQIAV-VPSAAALIIRALK-EPPRDRKKQKNIKHNGNISLEDVIGIAXIMRNRSMARYLS 501
I V VP+ +L+++A+ + P K I GN+ LE + IA + + A+ L+
Sbjct: 64 YDIKVGVPTTTSLLLKAINAQEPSGDPAHKKI---GNLDLEQIADIAIKKKPQLSAKTLT 120
Query: 502 GSVKEILGTAQSVGCTVEGRPPHDLIDDINSG 597
++K +LGTA+S+G TVEG+ P D+I +I+ G
Sbjct: 121 AAIKSLLGTARSIGITVEGKDPKDVIKEIDQG 152
>UniRef50_P62445 Cluster: 50S ribosomal protein L11P; n=9;
Archaea|Rep: 50S ribosomal protein L11P - Methanococcus
maripaludis
Length = 159
Score = 77.4 bits (182), Expect = 3e-13
Identities = 46/151 (30%), Positives = 84/151 (55%), Gaps = 3/151 (1%)
Frame = +1
Query: 154 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQN--RQ 327
++V + GG+ A L P IGPLG++ +V I T D++G+ + V++ V R
Sbjct: 4 QVVEILVSGGKATAGPPLGPAIGPLGVNIMQVVQKINNMTKDYEGMSVPVKVIVDTDKRT 63
Query: 328 AQIAV-VPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAXIMRNRSMARYLSG 504
++ V +P A+ALI + + ++ + + GNI++E ++ IA + ++ +A L
Sbjct: 64 FEVEVGIPPASALIKKEIGIEKGSQEPKHQVA--GNITMEQIVKIAKMKQDAMLAYNLKN 121
Query: 505 SVKEILGTAQSVGCTVEGRPPHDLIDDINSG 597
+ KE++GT SVG +VEG P + I++G
Sbjct: 122 ASKEVVGTCVSVGISVEGMTPSEAQKAIDAG 152
>UniRef50_Q97BN1 Cluster: 50S ribosomal protein L11P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L11P -
Thermoplasma volcanium
Length = 158
Score = 74.1 bits (174), Expect = 2e-12
Identities = 45/150 (30%), Positives = 84/150 (56%), Gaps = 4/150 (2%)
Frame = +1
Query: 178 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV---QNRQAQIAV-V 345
GG+ + P +GPLGL+ +V +I + T +++G+++ V +TV + ++ +I V V
Sbjct: 11 GGKATTGPPIGPALGPLGLNVAQVVKEINEKTKEFQGMQVPVTVTVIDPETKKYEITVGV 70
Query: 346 PSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAXIMRNRSMARYLSGSVKEILG 525
P +AL+ + L KK++ + GN +LE + +A +A+ L +V E+LG
Sbjct: 71 PPTSALLKKELGLEKGASKKKEAVA--GNATLEQIKNVAIKKMPSMLAKDLKSAVLEVLG 128
Query: 526 TAQSVGCTVEGRPPHDLIDDINSGALTIDE 615
T ++G VEG+ P ++ I SG + I++
Sbjct: 129 TCVAMGINVEGKDPKEVQKLIKSGQIKIEQ 158
>UniRef50_P62446 Cluster: 50S ribosomal protein L11P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L11P -
Nanoarchaeum equitans
Length = 160
Score = 69.7 bits (163), Expect = 5e-11
Identities = 41/150 (27%), Positives = 81/150 (54%), Gaps = 4/150 (2%)
Frame = +1
Query: 160 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV--QNRQAQ 333
+ L GG+ + P + P ++P KV +I K T +++GL + V++ + + ++ +
Sbjct: 6 IRLLVTGGKATPGPPIGPALSPFKINPGKVVAEINKLTKEYEGLPVPVEIIINPETKEYK 65
Query: 334 IAV-VPSAAALIIRALKEPPRDRKKQKNIKH-NGNISLEDVIGIAXIMRNRSMARYLSGS 507
I V +P +AL+++A R Q+ + GN+S++DV+ IA + L +
Sbjct: 66 IIVGLPPTSALLMKAAGVT---RGPQRTVHEWVGNVSMKDVVEIAKKKIDSMPTSSLKAA 122
Query: 508 VKEILGTAQSVGCTVEGRPPHDLIDDINSG 597
VK +LGTA++ G VE + P ++ +++ G
Sbjct: 123 VKSVLGTARATGIKVENKDPKEVTKEVDEG 152
>UniRef50_A2AB20 Cluster: Kinesin family member C1; n=3;
Catarrhini|Rep: Kinesin family member C1 - Homo sapiens
(Human)
Length = 203
Score = 53.6 bits (123), Expect = 4e-06
Identities = 22/34 (64%), Positives = 22/34 (64%)
Frame = -1
Query: 286 PSSHLWPWQCHHPPF*ETDQEDRF*GPKMMWHRL 185
PSSH PWQCHH PF ETD R GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>UniRef50_Q2S1Q1 Cluster: 50S ribosomal protein L11; n=3;
Bacteria|Rep: 50S ribosomal protein L11 - Salinibacter
ruber (strain DSM 13855)
Length = 146
Score = 48.4 bits (110), Expect = 1e-04
Identities = 32/138 (23%), Positives = 58/138 (42%)
Frame = +1
Query: 160 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIA 339
+ L+ GG+ + P +G G++ + T D G + V++TV ++
Sbjct: 9 IKLQIKGGQANPAPPIGPALGQHGVNIMEFCKAFNSRTEDRMGTLLPVEITVYADRSFDF 68
Query: 340 VVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAXIMRNRSMARYLSGSVKEI 519
+V S A ++ K G ++ +D + IA A + +
Sbjct: 69 IVKSPPASVLLKQKADIETAAGDPLRDDAGTVTWDDCLDIADQKLQDLNAHTVEKGASMV 128
Query: 520 LGTAQSVGCTVEGRPPHD 573
GTA+S+G TVEG+P H+
Sbjct: 129 AGTARSMGITVEGKPAHE 146
>UniRef50_Q8FSA7 Cluster: 50S ribosomal protein L11; n=616; cellular
organisms|Rep: 50S ribosomal protein L11 -
Corynebacterium efficiens
Length = 144
Score = 47.2 bits (107), Expect = 3e-04
Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Frame = +1
Query: 157 IVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV-QNRQAQ 333
++ L+ G+ + P +G G++ + AT + +G + V++TV ++R
Sbjct: 11 LIKLQIQAGQANPAPPVGPALGAHGVNIMEFCKAYNAATENQRGNVVPVEITVYEDRSFD 70
Query: 334 IAV-VPSAAALIIRALKEPPRDRKKQKNIKHN---GNISLEDVIGIAXIMRNRSMARYLS 501
+ P AA L+++A +K + H G ++++ + IA + AR +
Sbjct: 71 FKLKTPPAAKLLLKAA-----GLQKGSGVPHTNKVGKVTMDQIREIAETKKEDLNARDID 125
Query: 502 GSVKEILGTAQSVGCTVEG 558
+ K I GTA+S+G TVEG
Sbjct: 126 AAAKIIAGTARSMGITVEG 144
>UniRef50_P05969 Cluster: 50S ribosomal protein L11P; n=7;
Halobacteriaceae|Rep: 50S ribosomal protein L11P -
Halobacterium salinarium (Halobacterium halobium)
Length = 163
Score = 45.2 bits (102), Expect = 0.001
Identities = 35/148 (23%), Positives = 66/148 (44%), Gaps = 2/148 (1%)
Frame = +1
Query: 160 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQA-QI 336
+ + GG+ L P++GP + + V +I T + G ++ V + ++ + I
Sbjct: 5 IEVLVAGGQADPGPPLGPELGPTPVDVQAVVQEINDQTEAFDGTEVPVTIEYEDDGSFSI 64
Query: 337 AV-VPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAXIMRNRSMARYLSGSVK 513
V VP AAL+ + Q+N ++S+E + IA + +A + K
Sbjct: 65 EVGVPPTAALVKDEAGFDTGSGEPQENFV--ADLSIEQLKTIAEQKKPDLLAYDARNAAK 122
Query: 514 EILGTAQSVGCTVEGRPPHDLIDDINSG 597
E+ GT S+G T+EG + ++ G
Sbjct: 123 EVAGTCASLGVTIEGEDARTFNERVDDG 150
>UniRef50_O83265 Cluster: 50S ribosomal protein L11; n=5;
Bacteria|Rep: 50S ribosomal protein L11 - Treponema
pallidum
Length = 146
Score = 41.5 bits (93), Expect = 0.016
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 5/137 (3%)
Frame = +1
Query: 160 VNLRCVGGEVGATSSLAPKIGPLGLS-PKKVGDDIAKATSDWKGLKITVQLTVQNRQAQI 336
+ L+C G+ + P +GP G+S P+ V + S GL + V +TV + ++
Sbjct: 11 IKLQCPAGKATPAPPVGPALGPHGVSAPQFVQQFNDRTKSMEPGLVVPVVVTVYSDKSFS 70
Query: 337 AVV--PSAAALIIRA--LKEPPRDRKKQKNIKHNGNISLEDVIGIAXIMRNRSMARYLSG 504
V+ P AA LI +A +++ + KQK + +SL + IA + A L
Sbjct: 71 FVLKTPPAAVLIRKACGIEKGSTNSVKQKVAR----LSLAQLTEIAQVKLPDMSALTLDA 126
Query: 505 SVKEILGTAQSVGCTVE 555
+ + I GTA+S+G VE
Sbjct: 127 AKRIIAGTARSMGVEVE 143
>UniRef50_Q7VRP3 Cluster: 50S ribosomal protein L11; n=4;
Bacteria|Rep: 50S ribosomal protein L11 - Blochmannia
floridanus
Length = 146
Score = 38.7 bits (86), Expect = 0.11
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Frame = +1
Query: 205 LAPKIGPLGLSPKKVGDDIAKATSDWK-GLKITVQLTVQ-NRQAQIAVVPSAAALIIRAL 378
+ P +G G++ K D T+D++ GL + V +TV +R + A +++
Sbjct: 26 IGPALGQQGINIMKFCKDFNTRTADFEMGLILPVVITVYVDRSFSFVIKTPTAVFLLKKA 85
Query: 379 KEPPRDRKKQKNIKHNGNISLEDVIGIAXIMRNRSMARYLSGSVKEILGTAQSVGCTVE 555
+K K + G + + + IA I + L + K I+GTA+S+G VE
Sbjct: 86 AGIKSGSEKPKCVSV-GKVLISQIYEIAKIKLIDMTSLNLESASKSIMGTARSIGLEVE 143
>UniRef50_A3B9H4 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 260
Score = 37.5 bits (83), Expect = 0.26
Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Frame = +1
Query: 160 VNLRCVGGEVGATSSLAPKIGPLGL-----SPKKVGDD-----IAKATSDWKGLKITVQL 309
V L C GGEVG+ S A + P + K VG+ +A W+ +
Sbjct: 98 VPLPCTGGEVGSKSEPAAAVAPAVIVDVKEEEKSVGNGGGGGGAQEAARWWRAGGADGGV 157
Query: 310 TVQNRQ-AQIAVVPSAAALIIRALKEPPRDRK 402
TVQ R+ A++AV P A A +RAL+ PPR K
Sbjct: 158 TVQPRERARVAVQP-ADARRLRALRAPPRQGK 188
>UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 719
Score = 36.3 bits (80), Expect = 0.61
Identities = 14/54 (25%), Positives = 31/54 (57%)
Frame = -2
Query: 435 DVAVVFDIFLLFTITRRLLKGSDDKGCCRGNNSYLGLSVLNCQLHSDLETLPVT 274
++++ + +F LF T + + +D C G S++ L +++ +HS + T+P T
Sbjct: 288 ELSLYYKLFTLFKTTPKSEEKTDTMDCINGIRSFMMLQIISHHVHSAIRTIPTT 341
>UniRef50_Q2J5H8 Cluster: Ribosomal protein L11; n=1; Frankia sp.
CcI3|Rep: Ribosomal protein L11 - Frankia sp. (strain
CcI3)
Length = 165
Score = 35.1 bits (77), Expect = 1.4
Identities = 27/136 (19%), Positives = 68/136 (50%), Gaps = 2/136 (1%)
Frame = +1
Query: 157 IVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV-QNRQAQ 333
+V ++ GG + + +G G++ V + +A++ GL+++ +++ ++R +
Sbjct: 33 VVRIQQEGGNANV-AKIGQALGTYGVNIVGVMKEFNEASAIHHGLQVSADVSIFEDRSFE 91
Query: 334 IAVV-PSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAXIMRNRSMARYLSGSV 510
++V P+ +L+++A R + + +H G +++ + IA + + +
Sbjct: 92 LSVKSPATTSLLLQAAGV--RKGSPRPHAEHAGAVTVSQLREIAKVKLPDLNVDSMEAAE 149
Query: 511 KEILGTAQSVGCTVEG 558
K + GTA+S+G V G
Sbjct: 150 KIVAGTARSMGIKVTG 165
>UniRef50_A4ECY6 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 463
Score = 33.9 bits (74), Expect = 3.3
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 415 IKHNGNISLEDVIGIAXIMRNRSMARYLSGSVKEIL--GTAQSVGCTVEGRPPHDLIDDI 588
I + G + +G+A + N + R +S ++ I GT ++V C G+ P+DL
Sbjct: 355 ISYVGTLEAPSTLGVAGLSSNDELCRAVSDALDGITVDGTLEAVHCVWYGQMPYDLTAKT 414
Query: 589 NSGA 600
SGA
Sbjct: 415 VSGA 418
>UniRef50_Q9VGN4 Cluster: CG31374-PB, isoform B; n=4;
Sophophora|Rep: CG31374-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 935
Score = 33.9 bits (74), Expect = 3.3
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +1
Query: 235 SPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKN 414
SP ++ DDI K D + K + L ++NR+AQ A I E R++ ++KN
Sbjct: 536 SPDEL-DDIDKIRDDLQSTKQMLALELRNREAQDRENKKLLAKIRTLETELEREKSREKN 594
Query: 415 IKHNGNI 435
+++ N+
Sbjct: 595 LEYGSNV 601
>UniRef50_Q21QS4 Cluster: Major facilitator superfamily MFS_1; n=1;
Rhodoferax ferrireducens T118|Rep: Major facilitator
superfamily MFS_1 - Rhodoferax ferrireducens (strain DSM
15236 / ATCC BAA-621 / T118)
Length = 381
Score = 33.5 bits (73), Expect = 4.3
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = -3
Query: 488 AIDLFLMXFAIPITSSREMLPLCLIFFCFLRSRGGSLRALMIRAAAEGT--TAIWACLF* 315
A LM P TS +L L +F C G A + R A +GT TA CLF
Sbjct: 277 AASSILMVMLQPSTSPALVLTLVCVFGCTAIGWNGVYLAAVARQAPQGTAGTATAGCLFF 336
Query: 314 TVSCTVILRPFQSLVALAMSS 252
T V+ P +++ A+ +
Sbjct: 337 TYIGVVVSAPLFGVLSTALGN 357
>UniRef50_UPI00006615FB Cluster: Homolog of Homo sapiens "Splice
Isoform 2 of Nesprin 2; n=1; Takifugu rubripes|Rep:
Homolog of Homo sapiens "Splice Isoform 2 of Nesprin 2 -
Takifugu rubripes
Length = 4795
Score = 32.7 bits (71), Expect = 7.5
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 3/110 (2%)
Frame = +1
Query: 169 RCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIAVVP 348
R G+V S +GP+ + P+ ++ S GL +T L +N+ A+++
Sbjct: 2236 RSKNGQVSIISETVQHLGPVNVEPQPSKKEVNSQNSSNTGLAVTAALVEENK-AKLSPTQ 2294
Query: 349 SAAALIIRALKEPPRDRKK--QKNIKHNG-NISLEDVIGIAXIMRNRSMA 489
+ + K PP K K IK G SLE G +R RS A
Sbjct: 2295 RKS----KGPKHPPEPATKGNGKAIKEAGRQQSLEKTEGKLTPLRRRSKA 2340
>UniRef50_Q89W61 Cluster: 30S ribosomal protein S20; n=12;
Alphaproteobacteria|Rep: 30S ribosomal protein S20 -
Bradyrhizobium japonicum
Length = 88
Score = 32.3 bits (70), Expect = 10.0
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = +1
Query: 235 SPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKN 414
S KK IA+ T+ K + ++ V+N + I AAA+ A EP R Q+N
Sbjct: 6 SAKKATRKIARRTAVNKSRRTQMRGAVRNVEEAIKTGDRAAAVKALANAEPALMRAAQRN 65
Query: 415 IKHNGNIS 438
I H N S
Sbjct: 66 IIHKNNAS 73
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 663,549,519
Number of Sequences: 1657284
Number of extensions: 13668342
Number of successful extensions: 35980
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 34881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35959
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46881492319
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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