Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_L12
(634 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L06505-1|AAA36157.1| 165|Homo sapiens ribosomal protein L12 pro... 279 8e-75
BC105603-1|AAI05604.1| 165|Homo sapiens ribosomal protein L12 p... 279 8e-75
BC094831-1|AAH94831.1| 165|Homo sapiens ribosomal protein L12 p... 279 8e-75
BC050644-1|AAH50644.1| 165|Homo sapiens ribosomal protein L12 p... 279 8e-75
AL445222-15|CAH72929.1| 165|Homo sapiens ribosomal protein L12 ... 279 8e-75
AB209471-1|BAD92708.1| 197|Homo sapiens ribosomal protein L12 v... 277 2e-74
AL021366-3|CAA16156.1| 165|Homo sapiens cICK0721Q.2 (60S Riboso... 266 6e-71
BC059950-1|AAH59950.1| 132|Homo sapiens RPL12 protein protein. 146 9e-51
BX088650-2|CAM26293.1| 203|Homo sapiens kinesin family member C... 54 6e-07
AL662799-3|CAM25565.1| 203|Homo sapiens kinesin family member C... 54 6e-07
BX248088-14|CAM25707.1| 203|Homo sapiens kinesin family member ... 51 4e-06
AB041941-1|BAD83595.1| 915|Homo sapiens G-protein coupled recep... 33 0.64
BC035013-1|AAH35013.1| 652|Homo sapiens RAB11 family interactin... 31 2.6
AK022138-1|BAB13968.1| 258|Homo sapiens protein ( Homo sapiens ... 31 2.6
AF334812-1|AAK20892.1| 653|Homo sapiens Rab11 interacting prote... 31 3.4
AF153085-1|AAF34356.1| 549|Homo sapiens phosphoprotein pp75 pro... 31 3.4
AC010913-1|AAX88900.1| 522|Homo sapiens unknown protein. 31 3.4
AB020664-1|BAA74880.1| 733|Homo sapiens KIAA0857 protein protein. 31 3.4
BC014077-1|AAH14077.2| 724|Homo sapiens GRAM domain containing ... 30 7.8
AK074914-1|BAC11289.1| 713|Homo sapiens protein ( Homo sapiens ... 30 7.8
AB040966-1|BAA96057.1| 651|Homo sapiens KIAA1533 protein protein. 30 7.8
>L06505-1|AAA36157.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 279 bits (683), Expect = 8e-75
Identities = 128/159 (80%), Positives = 148/159 (93%)
Frame = +1
Query: 127 PPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQ 306
PPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+
Sbjct: 2 PPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVK 61
Query: 307 LTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAXIMRNRSM 486
LT+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ ++++ IA MR+RS+
Sbjct: 62 LTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSL 121
Query: 487 ARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGAL 603
AR LSG++KEILGTAQSVGC V+GR PHD+IDDINSGA+
Sbjct: 122 ARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAV 160
>BC105603-1|AAI05604.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 279 bits (683), Expect = 8e-75
Identities = 128/159 (80%), Positives = 148/159 (93%)
Frame = +1
Query: 127 PPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQ 306
PPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+
Sbjct: 2 PPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVK 61
Query: 307 LTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAXIMRNRSM 486
LT+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ ++++ IA MR+RS+
Sbjct: 62 LTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSL 121
Query: 487 ARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGAL 603
AR LSG++KEILGTAQSVGC V+GR PHD+IDDINSGA+
Sbjct: 122 ARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAV 160
>BC094831-1|AAH94831.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 279 bits (683), Expect = 8e-75
Identities = 128/159 (80%), Positives = 148/159 (93%)
Frame = +1
Query: 127 PPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQ 306
PPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+
Sbjct: 2 PPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVK 61
Query: 307 LTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAXIMRNRSM 486
LT+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ ++++ IA MR+RS+
Sbjct: 62 LTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSL 121
Query: 487 ARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGAL 603
AR LSG++KEILGTAQSVGC V+GR PHD+IDDINSGA+
Sbjct: 122 ARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAV 160
>BC050644-1|AAH50644.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 279 bits (683), Expect = 8e-75
Identities = 128/159 (80%), Positives = 148/159 (93%)
Frame = +1
Query: 127 PPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQ 306
PPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+
Sbjct: 2 PPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVK 61
Query: 307 LTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAXIMRNRSM 486
LT+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ ++++ IA MR+RS+
Sbjct: 62 LTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSL 121
Query: 487 ARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGAL 603
AR LSG++KEILGTAQSVGC V+GR PHD+IDDINSGA+
Sbjct: 122 ARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAV 160
>AL445222-15|CAH72929.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 279 bits (683), Expect = 8e-75
Identities = 128/159 (80%), Positives = 148/159 (93%)
Frame = +1
Query: 127 PPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQ 306
PPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+
Sbjct: 2 PPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVK 61
Query: 307 LTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAXIMRNRSM 486
LT+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ ++++ IA MR+RS+
Sbjct: 62 LTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSL 121
Query: 487 ARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGAL 603
AR LSG++KEILGTAQSVGC V+GR PHD+IDDINSGA+
Sbjct: 122 ARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAV 160
>AB209471-1|BAD92708.1| 197|Homo sapiens ribosomal protein L12
variant protein.
Length = 197
Score = 277 bits (679), Expect = 2e-74
Identities = 127/159 (79%), Positives = 147/159 (92%)
Frame = +1
Query: 127 PPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQ 306
PPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+
Sbjct: 34 PPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVK 93
Query: 307 LTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAXIMRNRSM 486
LT+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ ++++ I MR+RS+
Sbjct: 94 LTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIVRQMRHRSL 153
Query: 487 ARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGAL 603
AR LSG++KEILGTAQSVGC V+GR PHD+IDDINSGA+
Sbjct: 154 ARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAV 192
>AL021366-3|CAA16156.1| 165|Homo sapiens cICK0721Q.2 (60S Ribosomal
Protein L12 LIKE protein) protein.
Length = 165
Score = 266 bits (651), Expect = 6e-71
Identities = 122/159 (76%), Positives = 144/159 (90%)
Frame = +1
Query: 127 PPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQ 306
PPKFDPNEIK+V LRC GEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+
Sbjct: 2 PPKFDPNEIKVVYLRCTRGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVK 61
Query: 307 LTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAXIMRNRSM 486
LT++NRQAQI VVPSA+A II+ALK+PPRDRKKQKNIKHNGNI+ ++++ IA MR+RS+
Sbjct: 62 LTIENRQAQIEVVPSASAPIIKALKKPPRDRKKQKNIKHNGNITFDEIVNIARQMRHRSL 121
Query: 487 ARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGAL 603
AR LSG++KEI GTAQS+GC V+G PHD+IDDINSGA+
Sbjct: 122 ARELSGTIKEIPGTAQSMGCNVDGHHPHDIIDDINSGAV 160
>BC059950-1|AAH59950.1| 132|Homo sapiens RPL12 protein protein.
Length = 132
Score = 146 bits (355), Expect(2) = 9e-51
Identities = 67/90 (74%), Positives = 82/90 (91%)
Frame = +1
Query: 334 IAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAXIMRNRSMARYLSGSVK 513
I VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ ++++ IA MR+RS+AR LSG++K
Sbjct: 38 IEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIK 97
Query: 514 EILGTAQSVGCTVEGRPPHDLIDDINSGAL 603
EILGTAQSVGC V+GR PHD+IDDINSGA+
Sbjct: 98 EILGTAQSVGCNVDGRHPHDIIDDINSGAV 127
Score = 73.7 bits (173), Expect(2) = 9e-51
Identities = 32/36 (88%), Positives = 34/36 (94%)
Frame = +1
Query: 127 PPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGL 234
PPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGL
Sbjct: 2 PPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGL 37
>BX088650-2|CAM26293.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 53.6 bits (123), Expect = 6e-07
Identities = 22/34 (64%), Positives = 22/34 (64%)
Frame = -1
Query: 286 PSSHLWPWQCHHPPF*ETDQEDRF*GPKMMWHRL 185
PSSH PWQCHH PF ETD R GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>AL662799-3|CAM25565.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 53.6 bits (123), Expect = 6e-07
Identities = 22/34 (64%), Positives = 22/34 (64%)
Frame = -1
Query: 286 PSSHLWPWQCHHPPF*ETDQEDRF*GPKMMWHRL 185
PSSH PWQCHH PF ETD R GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>BX248088-14|CAM25707.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 50.8 bits (116), Expect = 4e-06
Identities = 21/34 (61%), Positives = 21/34 (61%)
Frame = -1
Query: 286 PSSHLWPWQCHHPPF*ETDQEDRF*GPKMMWHRL 185
PSSH PWQCHH PF TD R GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLVTDPGGRSWGPGQKWHRL 118
>AB041941-1|BAD83595.1| 915|Homo sapiens G-protein coupled receptor
protein.
Length = 915
Score = 33.5 bits (73), Expect = 0.64
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Frame = +1
Query: 259 IAKATSDWKGLKITVQLTVQNRQAQIAVVPSAAALIIR--ALKEPPRDRKKQ-KNIKHNG 429
I++ DWKG+ +T + Q QI ++ A+L IR L EP + RK K I
Sbjct: 429 ISRKFIDWKGIPVTQVQSTQGYNYQIEMIQQNASLPIRGHVLIEPDQFRKSHPKTIISMA 488
Query: 430 NISLEDVIGI 459
+++ D++ I
Sbjct: 489 SLTFGDILPI 498
>BC035013-1|AAH35013.1| 652|Homo sapiens RAB11 family interacting
protein 5 (class I) protein.
Length = 652
Score = 31.5 bits (68), Expect = 2.6
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 184 EVGATSSLAPKIGP-LGLSPKKVGDDIAKATSDWKGLK 294
E+G SSL K GP LG SP KA S W GL+
Sbjct: 475 ELGRRSSLGEKGGPILGASPHHSSSGEGKAKSSWFGLR 512
>AK022138-1|BAB13968.1| 258|Homo sapiens protein ( Homo sapiens
cDNA FLJ12076 fis, clone HEMBB1002442, weakly similar to
LIN-10 PROTEIN. ).
Length = 258
Score = 31.5 bits (68), Expect = 2.6
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -1
Query: 565 AACPPQYIQLTVLCQESLLLSQKGTGPLICFS*XSQFRLHPQGRCCR 425
+A PP +++ L+L +G + F+ QFR PQGRCC+
Sbjct: 119 SAIPPHFLESGSHRIVGLVLGCEGNILPLVFNLVGQFRNKPQGRCCQ 165
>AF334812-1|AAK20892.1| 653|Homo sapiens Rab11 interacting protein
Rip11a protein.
Length = 653
Score = 31.1 bits (67), Expect = 3.4
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 184 EVGATSSLAPKIGP-LGLSPKKVGDDIAKATSDWKGLK 294
E+G SSL K GP LG SP KA S W GL+
Sbjct: 476 ELGRRSSLGEKGGPILGASPHHSSSGEEKAKSSWFGLR 513
>AF153085-1|AAF34356.1| 549|Homo sapiens phosphoprotein pp75
protein.
Length = 549
Score = 31.1 bits (67), Expect = 3.4
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 184 EVGATSSLAPKIGP-LGLSPKKVGDDIAKATSDWKGLK 294
E+G SSL K GP LG SP KA S W GL+
Sbjct: 372 ELGRRSSLGEKGGPILGASPHHSSSGEEKAKSSWFGLR 409
>AC010913-1|AAX88900.1| 522|Homo sapiens unknown protein.
Length = 522
Score = 31.1 bits (67), Expect = 3.4
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 184 EVGATSSLAPKIGP-LGLSPKKVGDDIAKATSDWKGLK 294
E+G SSL K GP LG SP KA S W GL+
Sbjct: 476 ELGRRSSLGEKGGPILGASPHHSSSGEEKAKSSWFGLR 513
>AB020664-1|BAA74880.1| 733|Homo sapiens KIAA0857 protein protein.
Length = 733
Score = 31.1 bits (67), Expect = 3.4
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 184 EVGATSSLAPKIGP-LGLSPKKVGDDIAKATSDWKGLK 294
E+G SSL K GP LG SP KA S W GL+
Sbjct: 556 ELGRRSSLGEKGGPILGASPHHSSSGEEKAKSSWFGLR 593
>BC014077-1|AAH14077.2| 724|Homo sapiens GRAM domain containing 1A
protein.
Length = 724
Score = 29.9 bits (64), Expect = 7.8
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +1
Query: 142 PNEIKIVNLRCVGGEVGATSSLAPKIGPLGL----SPKKVGDDIA 264
P E+ + +C G E+G TS + PL L +PK+VGD IA
Sbjct: 206 PRELWHLVHQCYGSELGLTSEDEDYVSPLQLNGLGTPKEVGDVIA 250
>AK074914-1|BAC11289.1| 713|Homo sapiens protein ( Homo sapiens
cDNA FLJ90433 fis, clone NT2RP3000721. ).
Length = 713
Score = 29.9 bits (64), Expect = 7.8
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +1
Query: 142 PNEIKIVNLRCVGGEVGATSSLAPKIGPLGL----SPKKVGDDIA 264
P E+ + +C G E+G TS + PL L +PK+VGD IA
Sbjct: 199 PRELWHLVHQCYGSELGLTSEDEDYVSPLQLNGLGTPKEVGDVIA 243
>AB040966-1|BAA96057.1| 651|Homo sapiens KIAA1533 protein protein.
Length = 651
Score = 29.9 bits (64), Expect = 7.8
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +1
Query: 142 PNEIKIVNLRCVGGEVGATSSLAPKIGPLGL----SPKKVGDDIA 264
P E+ + +C G E+G TS + PL L +PK+VGD IA
Sbjct: 136 PRELWHLVHQCYGSELGLTSEDEDYVSPLQLNGLGTPKEVGDVIA 180
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,286,193
Number of Sequences: 237096
Number of extensions: 2190273
Number of successful extensions: 8224
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 8105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8224
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -