Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_L09
         (648 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L23647-3|AAK67242.2|  183|Caenorhabditis elegans Hypothetical pr...    58   5e-09
U50191-9|AAK31558.1|  139|Caenorhabditis elegans Hypothetical pr...    43   2e-04
Z74472-6|CAA98947.1| 1025|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z83217-2|CAB05680.2|  319|Caenorhabditis elegans Hypothetical pr...    29   2.8  
AL132904-12|CAC35845.1|  236|Caenorhabditis elegans Hypothetical...    29   3.8  
Z81128-7|CAB03400.1|  898|Caenorhabditis elegans Hypothetical pr...    28   5.0  
AF003151-20|AAK18920.2|  251|Caenorhabditis elegans Hypothetical...    28   6.6  
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>L23647-3|AAK67242.2|  183|Caenorhabditis elegans Hypothetical
           protein ZC262.8 protein.
          Length = 183

 Score = 58.0 bits (134), Expect = 5e-09
 Identities = 27/58 (46%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
 Frame = +2

Query: 278 CYMCALGLDVKHT--DVLILSQFVRSDGCMLPKRITGLCKRQQKKIGKMVSMAQKAGL 445
           C +C   + +K T  DVLIL QF+R DG +LP+++TGLCK+QQ ++ + V  A  +GL
Sbjct: 68  CSLCTCNVPIKLTYKDVLILEQFMRDDGTVLPRQLTGLCKKQQLRMERCVMQAFWSGL 125


>U50191-9|AAK31558.1|  139|Caenorhabditis elegans Hypothetical
           protein T14B4.2 protein.
          Length = 139

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 24/89 (26%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
 Frame = +2

Query: 257 PSSEKP-PCYMCALGLDVKHTDVLILSQFVRS-DGCMLPKRITGLCKRQQKKIGKMVSMA 430
           P +++P   ++C+ G+++ + +  +L QFV +  G +  + ITGLC   +KK+ + ++ +
Sbjct: 46  PYTKEPRKSFLCSTGVELDYKNSRLLQQFVSTFSGRVYDRHITGLCDENKKKLIEAIAKS 105

Query: 431 QKAGLM-INLTPSNSKKDPTKRKSLQEIQ 514
           ++AG M I +      +DP     L+ I+
Sbjct: 106 RRAGFMPIFVKDPKYTRDPKLFDPLKPIR 134


>Z74472-6|CAA98947.1| 1025|Caenorhabditis elegans Hypothetical
           protein F23H12.6 protein.
          Length = 1025

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
 Frame = +2

Query: 68  IHHYSSLYQLQTNLNIKE--IRERTEGTNLVIEGVTLPSPRTELLVRPPNVTPPLPNIDL 241
           +H    LY L  N  I+E  I +   G+N+V  G  +       +VR   +   LPN++L
Sbjct: 312 LHDTIYLYALILNKTIEEQGIEQIANGSNIVTRGAGIEFEGMSGVVRMNGIGYRLPNMNL 371

Query: 242 SLTKLPSSEKPPCYMCALGLDVKHTDVLI 328
           +     ++++   YM      V  T  +I
Sbjct: 372 ANLDSNATQRTVAYMDIDSTSVNWTFAII 400


>Z83217-2|CAB05680.2|  319|Caenorhabditis elegans Hypothetical
           protein C10C6.3 protein.
          Length = 319

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +2

Query: 134 TEGTNLVIEGVTLPSPRTELLVRPPNVTP 220
           T+G  L ++G T P+P+   L  P + TP
Sbjct: 257 TDGNELSLKGATAPTPQKAKLTTPTSTTP 285


>AL132904-12|CAC35845.1|  236|Caenorhabditis elegans Hypothetical
           protein Y111B2A.16 protein.
          Length = 236

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +2

Query: 197 VRPPNVTPPLPNIDLSLTKLPSSEKPPCYMCALGLDVKHTDVLILSQFVRSDG 355
           VRPP    P P      T + SS+ PP +   + L V    V  + + ++SDG
Sbjct: 7   VRPPMKRGPKPQSFFDDTPVASSDDPPDFESHIVLRVPEDCVGRIEKIIQSDG 59


>Z81128-7|CAB03400.1|  898|Caenorhabditis elegans Hypothetical
           protein T23D8.7 protein.
          Length = 898

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +2

Query: 50  TKKINFIHHYSSLYQLQTNLNIKEIRERTEGTNLVIEGVTLPSPRTELLVRPPNV 214
           T++ N +    +  ++  ++N  +   + E   L IEG  LP PR  LL R PN+
Sbjct: 428 TERQNAVMSLQNRLKMDNDVNAVKFGLKVEAQLLKIEGRVLPVPR--LLYRSPNL 480


>AF003151-20|AAK18920.2|  251|Caenorhabditis elegans Hypothetical
           protein D1007.16 protein.
          Length = 251

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = +2

Query: 41  LLFTKKINFIHHYSSLYQLQTNLNIKEIRERTEGTNLVIE 160
           L F KK N +     L ++ +N+N+K+ R+  +GT L ++
Sbjct: 90  LFFDKKTNTVR----LEKITSNINVKKTRDLDQGTELALK 125


>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
           protein T07D4.4a protein.
          Length = 1022

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 21/66 (31%), Positives = 28/66 (42%)
 Frame = -1

Query: 324 STSVCFTSNPNAHI*HGGFSEDGSLVNERSIFGSGGVTFGGLTSSSVRGEGSVTPSITRF 145
           S+S CF + P +    G F    S  + +  FG        +T SS  G GS     T+ 
Sbjct: 304 SSSSCFAAKPTSTSAGGSFGNQPSSFSSKPSFGGAFGASTSVTGSSSMG-GSFGNKSTK- 361

Query: 144 VPSVRS 127
           VP V S
Sbjct: 362 VPDVES 367


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,486,742
Number of Sequences: 27780
Number of extensions: 317080
Number of successful extensions: 997
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 996
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)