Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_L05
         (648 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC009428-1|AAH09428.1|  152|Homo sapiens fission 1 (mitochondria...   143   4e-34
BC003540-1|AAH03540.1|  152|Homo sapiens fission 1 (mitochondria...   143   4e-34
AC006329-1|AAP22366.1|  152|Homo sapiens unknown protein.             143   4e-34
AF151893-1|AAD34130.1|  152|Homo sapiens CGI-135 protein protein.     141   2e-33

>BC009428-1|AAH09428.1|  152|Homo sapiens fission 1 (mitochondrial
           outer membrane) homolog (S. cerevisiae) protein.
          Length = 152

 Score =  143 bits (347), Expect = 4e-34
 Identities = 71/121 (58%), Positives = 86/121 (71%), Gaps = 1/121 (0%)
 Frame = +2

Query: 170 MEDVLXEIVSSEDLQKFERVFHEQLHQGNVSHKAQFEYAWCLVRSKYPTDIRKGILLLKE 349
           ME VL E+VS EDL KFE+ F  +   G+VS   QFEYAWCLVRSKY  DIRKGI+LL+E
Sbjct: 1   MEAVLNELVSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEE 60

Query: 350 LF-NSHPEGKRDYLFYLAIGNARIKEYNKALHYVKSFLEIEPANQQVLALERQINKRMEK 526
           L      E +RDY+FYLA+GN R+KEY KAL YV+  L+ EP N Q   LER I+K M+K
Sbjct: 61  LLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMKK 120

Query: 527 E 529
           +
Sbjct: 121 D 121


>BC003540-1|AAH03540.1|  152|Homo sapiens fission 1 (mitochondrial
           outer membrane) homolog (S. cerevisiae) protein.
          Length = 152

 Score =  143 bits (347), Expect = 4e-34
 Identities = 71/121 (58%), Positives = 86/121 (71%), Gaps = 1/121 (0%)
 Frame = +2

Query: 170 MEDVLXEIVSSEDLQKFERVFHEQLHQGNVSHKAQFEYAWCLVRSKYPTDIRKGILLLKE 349
           ME VL E+VS EDL KFE+ F  +   G+VS   QFEYAWCLVRSKY  DIRKGI+LL+E
Sbjct: 1   MEAVLNELVSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEE 60

Query: 350 LF-NSHPEGKRDYLFYLAIGNARIKEYNKALHYVKSFLEIEPANQQVLALERQINKRMEK 526
           L      E +RDY+FYLA+GN R+KEY KAL YV+  L+ EP N Q   LER I+K M+K
Sbjct: 61  LLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMKK 120

Query: 527 E 529
           +
Sbjct: 121 D 121


>AC006329-1|AAP22366.1|  152|Homo sapiens unknown protein.
          Length = 152

 Score =  143 bits (347), Expect = 4e-34
 Identities = 71/121 (58%), Positives = 86/121 (71%), Gaps = 1/121 (0%)
 Frame = +2

Query: 170 MEDVLXEIVSSEDLQKFERVFHEQLHQGNVSHKAQFEYAWCLVRSKYPTDIRKGILLLKE 349
           ME VL E+VS EDL KFE+ F  +   G+VS   QFEYAWCLVRSKY  DIRKGI+LL+E
Sbjct: 1   MEAVLNELVSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEE 60

Query: 350 LF-NSHPEGKRDYLFYLAIGNARIKEYNKALHYVKSFLEIEPANQQVLALERQINKRMEK 526
           L      E +RDY+FYLA+GN R+KEY KAL YV+  L+ EP N Q   LER I+K M+K
Sbjct: 61  LLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMKK 120

Query: 527 E 529
           +
Sbjct: 121 D 121


>AF151893-1|AAD34130.1|  152|Homo sapiens CGI-135 protein protein.
          Length = 152

 Score =  141 bits (341), Expect = 2e-33
 Identities = 69/121 (57%), Positives = 86/121 (71%), Gaps = 1/121 (0%)
 Frame = +2

Query: 170 MEDVLXEIVSSEDLQKFERVFHEQLHQGNVSHKAQFEYAWCLVRSKYPTDIRKGILLLKE 349
           ME VL E+VS EDL KFE+ F  +   G+VS   QFEYAWCLVR++Y  DIRKGI+LL+E
Sbjct: 1   MEAVLNELVSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEE 60

Query: 350 LF-NSHPEGKRDYLFYLAIGNARIKEYNKALHYVKSFLEIEPANQQVLALERQINKRMEK 526
           L      E +RDY+FYLA+GN R+KEY KAL YV+  L+ EP N Q   LER I+K M+K
Sbjct: 61  LLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMKK 120

Query: 527 E 529
           +
Sbjct: 121 D 121


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,562,066
Number of Sequences: 237096
Number of extensions: 1721206
Number of successful extensions: 4207
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4203
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)