Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_L05
         (648 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39853-3|AAT92078.1|  151|Caenorhabditis elegans S. cerevisiae f...    70   1e-12
U39853-4|AAK39224.1|  138|Caenorhabditis elegans S. cerevisiae f...    69   4e-12
U39999-11|AAA81109.1|  143|Caenorhabditis elegans S. cerevisiae ...    64   6e-11
Z68134-1|CAA92226.2|  492|Caenorhabditis elegans Hypothetical pr...    36   0.025
AF016444-5|AAB65932.1|  330|Caenorhabditis elegans Serpentine re...    28   6.6  
Z70038-2|CAA93885.2|  399|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>U39853-3|AAT92078.1|  151|Caenorhabditis elegans S. cerevisiae
           fis1-related protein2, isoform b protein.
          Length = 151

 Score = 70.1 bits (164), Expect = 1e-12
 Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 2/116 (1%)
 Frame = +2

Query: 179 VLXEIVSSEDLQKFERVFHEQLHQGNVSHKAQFEYAWCLVRSKYPTDIRKGILLLKELFN 358
           +L E  +   L      +  Q  +G+ S  + F +A  ++ SK   D+++GI+ L++L  
Sbjct: 6   ILEERTNPAVLMNAREQYMRQCARGDPSAASTFAFAHAMIGSKNKLDVKEGIVCLEKLLR 65

Query: 359 SHPE--GKRDYLFYLAIGNARIKEYNKALHYVKSFLEIEPANQQVLALERQINKRM 520
              +   KR+Y++YLA+ +ARIK+Y+ AL Y+   L+ E  NQQ   L+  I   M
Sbjct: 66  DDEDRTSKRNYVYYLAVAHARIKQYDLALGYIDVLLDAEGDNQQAKTLKESIKSAM 121


>U39853-4|AAK39224.1|  138|Caenorhabditis elegans S. cerevisiae
           fis1-related protein2, isoform a protein.
          Length = 138

 Score = 68.5 bits (160), Expect = 4e-12
 Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
 Frame = +2

Query: 230 FHEQLHQGNVSHKAQFEYAWCLVRSKYPTDIRKGILLLKELFNSHPE--GKRDYLFYLAI 403
           +  Q  +G+ S  + F +A  ++ SK   D+++GI+ L++L     +   KR+Y++YLA+
Sbjct: 10  YMRQCARGDPSAASTFAFAHAMIGSKNKLDVKEGIVCLEKLLRDDEDRTSKRNYVYYLAV 69

Query: 404 GNARIKEYNKALHYVKSFLEIEPANQQVLALERQINKRM 520
            +ARIK+Y+ AL Y+   L+ E  NQQ   L+  I   M
Sbjct: 70  AHARIKQYDLALGYIDVLLDAEGDNQQAKTLKESIKSAM 108


>U39999-11|AAA81109.1|  143|Caenorhabditis elegans S. cerevisiae
           fis1-related protein1 protein.
          Length = 143

 Score = 64.5 bits (150), Expect = 6e-11
 Identities = 32/94 (34%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
 Frame = +2

Query: 254 NVSHKAQFEYAWCLVRSKYPTDIRKGILLLKELFN--SHPEGKRDYLFYLAIGNARIKEY 427
           +VS + Q   A  LV S+   +I++GI +L+++ +  +H E  R  + YLA+ +AR+K Y
Sbjct: 23  SVSRENQISLAIVLVGSEDRREIKEGIEILEDVVSDTAHSEDSRVCVHYLALAHARLKNY 82

Query: 428 NKALHYVKSFLEIEPANQQVLALERQINKRMEKE 529
           +K+++ + + L  EP+N Q   L R + K+M++E
Sbjct: 83  DKSINLLNALLRTEPSNMQATELRRAVEKKMKRE 116


>Z68134-1|CAA92226.2|  492|Caenorhabditis elegans Hypothetical
           protein T27A8.1 protein.
          Length = 492

 Score = 35.9 bits (79), Expect = 0.025
 Identities = 20/80 (25%), Positives = 34/80 (42%)
 Frame = +2

Query: 200 SEDLQKFERVFHEQLHQGNVSHKAQFEYAWCLVRSKYPTDIRKGILLLKELFNSHPEGKR 379
           ++ +    R F    H  +     Q    W LV S+YP + RK I   K + N H     
Sbjct: 65  TDHIHNLHRKFPNLTHIYSAGQSVQGRELWVLVVSRYPIEHRKLIPEFKYVANMHGNEVT 124

Query: 380 DYLFYLAIGNARIKEYNKAL 439
             +F +++ +  ++ YN  L
Sbjct: 125 GRVFLVSLAHTLLENYNSNL 144


>AF016444-5|AAB65932.1|  330|Caenorhabditis elegans Serpentine
           receptor, class ab (class a-like) protein 6 protein.
          Length = 330

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +3

Query: 57  HCKSTNFLANKPYT-ATPIFLFVNVKYLIKVIIYSNRL*WKTYXTRLFH 200
           HC+    +++  +   T +F  V+    + ++I+S+   WK+  ++LFH
Sbjct: 7   HCQMMEHISSSLFLRCTILFELVSSLIAVPLVIFSSFYIWKSQTSKLFH 55


>Z70038-2|CAA93885.2|  399|Caenorhabditis elegans Hypothetical
           protein ZK1067.3 protein.
          Length = 399

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +3

Query: 213 KNSKGSFMNNCTKGTFPTKPSLNTHGV*CAASIQR 317
           +N    F+NN T G  P KPS   + +    + QR
Sbjct: 159 RNEVSEFLNNITSGATPGKPSSTNNSLNTTGNRQR 193


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,019,962
Number of Sequences: 27780
Number of extensions: 285970
Number of successful extensions: 713
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 713
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)