Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_L01
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    25   0.72 
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    24   0.95 
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   5.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.7  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.9  

>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 292 WDDWLAGPVGLVAQY 336
           W+DW+  P+G  A Y
Sbjct: 285 WNDWIVAPLGYDAYY 299


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 24.2 bits (50), Expect = 0.95
 Identities = 11/46 (23%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = +1

Query: 289 IWDDWLAGPVGLVAQYSF-LKDHEVN-NMFLLKPXSLPNITVKHII 420
           +++ W +GP+ +  QY F L ++E +    + KP  + + ++  I+
Sbjct: 265 VYNQWWSGPLSMYYQYPFGLPEYEYSFYQEVKKPKKITDFSISAIM 310


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/43 (20%), Positives = 21/43 (48%)
 Frame = +1

Query: 154 CLTKMRETKMSSHLAGGRLNVALLQETMXTELLNLLQQYSGPK 282
           CL  +   +   H A  R ++  L E   +++ ++ +++  PK
Sbjct: 10  CLATLALGQKDPHFAADRNSIVHLFEWKWSDIADVCERFLAPK 52


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/42 (21%), Positives = 22/42 (52%)
 Frame = -2

Query: 140 MYLIIVIC*LFFFQHINEFIIDTTLSVDTNLCFYHVFIDYIL 15
           ++L+ ++C  +F  H+  +      +V   LC Y+ +  +I+
Sbjct: 68  VHLLFLLCSGYFTVHLLFYCPFIIFTVHFLLCTYYFYYAFII 109


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -2

Query: 140 MYLIIVIC*LFFFQHINEFIIDTTLSVD 57
           +YL IV   LF  + + +  I+ TLS+D
Sbjct: 309 VYLAIVFNGLFTEEDVADVPINVTLSLD 336


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,530
Number of Sequences: 336
Number of extensions: 2980
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)