Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_L01
         (654 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069498-1|AAL39643.1|  617|Drosophila melanogaster LD22396p pro...    58   1e-08
AF133260-1|AAD38513.1|  617|Drosophila melanogaster vacuolar pro...    58   1e-08
AE014298-2872|AAN09503.1|  617|Drosophila melanogaster CG12230-P...    58   1e-08
AE014298-2871|AAF48972.1|  617|Drosophila melanogaster CG12230-P...    58   1e-08

>AY069498-1|AAL39643.1|  617|Drosophila melanogaster LD22396p
           protein.
          Length = 617

 Score = 58.0 bits (134), Expect = 1e-08
 Identities = 29/91 (31%), Positives = 51/91 (56%)
 Frame = +1

Query: 199 GGRLNVALLQETMXTELLNLLQQYSGPKVTIWDDWLAGPVGLVAQYSFLKDHEVNNMFLL 378
           G R+N+ LLQE    ELL  L +  G KV + D+ + GP+ LV +     D  +  + L 
Sbjct: 9   GQRVNLQLLQEAACRELLQQLDRIEGSKVIVLDETMIGPLDLVTRPKLFADRGIRLLALK 68

Query: 379 KPXSLPNITVKHIIFISRPKLSLMDLVADYI 471
               LP   V +++++ RP+++LM+ +A ++
Sbjct: 69  PELHLPR-EVANVVYVMRPRVALMEQLAAHV 98



 Score = 35.9 bits (79), Expect = 0.048
 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = +2

Query: 506 EFHLFFVPRKSELCKVHLTNXGVVSNM-TIEXFKCDIIPFESDVMSLEL 649
           ++H+ F PR+S LC   L   GV+ +   IE    + +P + D++S+E+
Sbjct: 109 QYHILFAPRRSCLCVSQLEVSGVLGSFGNIEELAWNYLPLDVDLVSMEM 157


>AF133260-1|AAD38513.1|  617|Drosophila melanogaster vacuolar
           protein sorting protein33 protein.
          Length = 617

 Score = 58.0 bits (134), Expect = 1e-08
 Identities = 29/91 (31%), Positives = 51/91 (56%)
 Frame = +1

Query: 199 GGRLNVALLQETMXTELLNLLQQYSGPKVTIWDDWLAGPVGLVAQYSFLKDHEVNNMFLL 378
           G R+N+ LLQE    ELL  L +  G KV + D+ + GP+ LV +     D  +  + L 
Sbjct: 9   GQRVNLQLLQEAACRELLQQLDRIEGSKVIVLDETMIGPLDLVTRPKLFADRGIRLLALK 68

Query: 379 KPXSLPNITVKHIIFISRPKLSLMDLVADYI 471
               LP   V +++++ RP+++LM+ +A ++
Sbjct: 69  PELHLPR-EVANVVYVMRPRVALMEQLAAHV 98



 Score = 35.9 bits (79), Expect = 0.048
 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = +2

Query: 506 EFHLFFVPRKSELCKVHLTNXGVVSNM-TIEXFKCDIIPFESDVMSLEL 649
           ++H+ F PR+S LC   L   GV+ +   IE    + +P + D++S+E+
Sbjct: 109 QYHILFAPRRSCLCVSQLEVSGVLGSFGNIEELAWNYLPLDVDLVSMEM 157


>AE014298-2872|AAN09503.1|  617|Drosophila melanogaster CG12230-PB,
           isoform B protein.
          Length = 617

 Score = 58.0 bits (134), Expect = 1e-08
 Identities = 29/91 (31%), Positives = 51/91 (56%)
 Frame = +1

Query: 199 GGRLNVALLQETMXTELLNLLQQYSGPKVTIWDDWLAGPVGLVAQYSFLKDHEVNNMFLL 378
           G R+N+ LLQE    ELL  L +  G KV + D+ + GP+ LV +     D  +  + L 
Sbjct: 9   GQRVNLQLLQEAACRELLQQLDRIEGSKVIVLDETMIGPLDLVTRPKLFADRGIRLLALK 68

Query: 379 KPXSLPNITVKHIIFISRPKLSLMDLVADYI 471
               LP   V +++++ RP+++LM+ +A ++
Sbjct: 69  PELHLPR-EVANVVYVMRPRVALMEQLAAHV 98



 Score = 35.9 bits (79), Expect = 0.048
 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = +2

Query: 506 EFHLFFVPRKSELCKVHLTNXGVVSNM-TIEXFKCDIIPFESDVMSLEL 649
           ++H+ F PR+S LC   L   GV+ +   IE    + +P + D++S+E+
Sbjct: 109 QYHILFAPRRSCLCVSQLEVSGVLGSFGNIEELAWNYLPLDVDLVSMEM 157


>AE014298-2871|AAF48972.1|  617|Drosophila melanogaster CG12230-PA,
           isoform A protein.
          Length = 617

 Score = 58.0 bits (134), Expect = 1e-08
 Identities = 29/91 (31%), Positives = 51/91 (56%)
 Frame = +1

Query: 199 GGRLNVALLQETMXTELLNLLQQYSGPKVTIWDDWLAGPVGLVAQYSFLKDHEVNNMFLL 378
           G R+N+ LLQE    ELL  L +  G KV + D+ + GP+ LV +     D  +  + L 
Sbjct: 9   GQRVNLQLLQEAACRELLQQLDRIEGSKVIVLDETMIGPLDLVTRPKLFADRGIRLLALK 68

Query: 379 KPXSLPNITVKHIIFISRPKLSLMDLVADYI 471
               LP   V +++++ RP+++LM+ +A ++
Sbjct: 69  PELHLPR-EVANVVYVMRPRVALMEQLAAHV 98



 Score = 35.9 bits (79), Expect = 0.048
 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = +2

Query: 506 EFHLFFVPRKSELCKVHLTNXGVVSNM-TIEXFKCDIIPFESDVMSLEL 649
           ++H+ F PR+S LC   L   GV+ +   IE    + +P + D++S+E+
Sbjct: 109 QYHILFAPRRSCLCVSQLEVSGVLGSFGNIEELAWNYLPLDVDLVSMEM 157


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,014,857
Number of Sequences: 53049
Number of extensions: 456434
Number of successful extensions: 772
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)