Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_K12
(655 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 233 2e-62
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 138 6e-34
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 134 1e-32
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 128 5e-31
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 117 1e-27
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 109 3e-25
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 109 5e-25
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 101 7e-23
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 100 4e-22
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 97 3e-21
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 89 4e-19
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 84 1e-17
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 65 7e-12
SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme Mms2|Schizos... 50 3e-07
SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces ... 27 1.8
SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr... 27 2.4
SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr 1|||... 26 4.1
SPBC947.11c |elg1||DNA replication factor C complex subunit Elg1... 26 4.1
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 25 9.5
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 25 9.5
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 233 bits (570), Expect = 2e-62
Identities = 103/120 (85%), Positives = 108/120 (90%)
Frame = +1
Query: 172 EDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLD 351
+DLFHWQATIMGP DSPY GGVFFL+IHFPTDYPFKPPKV FTTRIYHPNINSNGSICLD
Sbjct: 28 DDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLD 87
Query: 352 ILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELXREWTTKYAM 531
ILR QWSPALTISKVLLSICSLL DPNPDDPLVPEIA +YKTDR +Y REWT KYA+
Sbjct: 88 ILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHVYKTDRSRYELSAREWTRKYAI 147
Score = 53.6 bits (123), Expect = 2e-08
Identities = 30/66 (45%), Positives = 36/66 (54%)
Frame = +3
Query: 90 MALKRINRELQDLGRDPPAQCSAGPHG*RSVPLASHNYGPS*QSLSRRSFLPYHTFPYRL 269
MALKRINREL DLG+DPP+ CSAGP G + GP+ + F FP
Sbjct: 1 MALKRINRELADLGKDPPSSCSAGPVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDY 60
Query: 270 PFQTTK 287
PF+ K
Sbjct: 61 PFKPPK 66
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 138 bits (334), Expect = 6e-34
Identities = 61/140 (43%), Positives = 92/140 (65%), Gaps = 4/140 (2%)
Frame = +1
Query: 121 KIWAGIHQH---NVRQAHTAEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKV 291
K ++ + +H ++R ++LFHW T +GP DS Y GG F ++ FP DYPF+PP +
Sbjct: 14 KEYSDLREHPIPDIRVNLVDDNLFHWACTALGPSDSVYAGGKFHFSLKFPLDYPFQPPTI 73
Query: 292 AFTTRIYHPNINSNGSICLDILRAQ-WSPALTISKVLLSICSLLCDPNPDDPLVPEIARI 468
FTTRIYHPN +S G++CL IL+ Q + P++ + VL I LL +PNPDDPLV IA
Sbjct: 74 EFTTRIYHPNFDSEGNVCLAILKQQVFKPSIKLRSVLEQILQLLREPNPDDPLVASIAEQ 133
Query: 469 YKTDREKYNELXREWTTKYA 528
Y+ DR ++++ R++ ++A
Sbjct: 134 YRNDRPSFDKIARDYVEQFA 153
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 134 bits (323), Expect = 1e-32
Identities = 55/120 (45%), Positives = 81/120 (67%), Gaps = 1/120 (0%)
Frame = +1
Query: 172 EDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSN-GSICL 348
+D+ H + GP +PY+GG F + I P DYPF+PPK+ F T+IYHPN++S G+ICL
Sbjct: 31 DDISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYPFRPPKMNFDTKIYHPNVSSQTGAICL 90
Query: 349 DILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELXREWTTKYA 528
DIL+ QWSP T+ L+S+ SLLC P P +P ++A++Y + +++ REWT+ YA
Sbjct: 91 DILKDQWSPVYTMKSALISLQSLLCTPEPSNPQDAQVAQVYLQNYQQFVRTAREWTSSYA 150
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 128 bits (310), Expect = 5e-31
Identities = 59/124 (47%), Positives = 81/124 (65%)
Frame = +1
Query: 160 AHTAEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGS 339
A T ++L +++ T+ GP S Y+GG F L + P +YP PP V F T+IYHPN++ G
Sbjct: 25 APTEDNLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMMPPNVRFLTKIYHPNVDKLGR 84
Query: 340 ICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELXREWTT 519
ICL L+ WSPAL I VLLSI +L+ PNPDDPL ++A+I+K + + REWT
Sbjct: 85 ICLSTLKKDWSPALQIRTVLLSIQALMGAPNPDDPLDNDVAKIWKENEPQAIANAREWTK 144
Query: 520 KYAM 531
KYA+
Sbjct: 145 KYAV 148
Score = 26.2 bits (55), Expect = 4.1
Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +3
Query: 90 MAL-KRINRELQDLGRDPPAQCSAGP 164
MAL KRI +E++ L RDPP A P
Sbjct: 1 MALPKRIIKEIETLTRDPPPGIVAAP 26
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 117 bits (282), Expect = 1e-27
Identities = 55/123 (44%), Positives = 77/123 (62%), Gaps = 2/123 (1%)
Frame = +1
Query: 166 TAEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSI 342
T D+FHW+A I GP ++PY+GG + L IH YP PP V F T+I HPNI+ +NG +
Sbjct: 30 TDVDMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYPISPPSVYFQTKIVHPNISWTNGEV 89
Query: 343 CLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKT-DREKYNELXREWTT 519
C+DIL+ WSPA ++ L+I SLL + + PL + A++ +T D+ YN L R T
Sbjct: 90 CMDILKTHWSPAWSLQSACLAIISLLSNYDASSPLNVDAAKLLRTGDKTAYNSLVRCTTY 149
Query: 520 KYA 528
YA
Sbjct: 150 LYA 152
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 109 bits (263), Expect = 3e-25
Identities = 45/114 (39%), Positives = 74/114 (64%)
Frame = +1
Query: 151 VRQAHTAEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 330
V + ++++ W A I+GP D+P++ G F L + F YP KPP V F + ++HPN+ +
Sbjct: 24 VSASPVSDNVMLWNAVIIGPADTPFEDGTFKLVLSFDEQYPNKPPLVKFVSTMFHPNVYA 83
Query: 331 NGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKY 492
NG +CLDIL+ +WSP ++ +L SI SLL DPN P E A++++ ++++Y
Sbjct: 84 NGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNNASPANAEAAQLHRENKKEY 137
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 109 bits (261), Expect = 5e-25
Identities = 45/109 (41%), Positives = 71/109 (65%)
Frame = +1
Query: 175 DLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDI 354
+L HW TI GP D+ Y+G F +++ FP +YP+ PP + FT+ ++HPN++ +G+ICLDI
Sbjct: 57 NLLHWAGTITGPSDTYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVDMSGNICLDI 116
Query: 355 LRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNEL 501
L+ +WS + +LLS+ SLL +PN PL + A ++ D +Y L
Sbjct: 117 LKDKWSAVYNVQTILLSLQSLLGEPNNASPLNAQAAELWSKDPIEYKRL 165
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 101 bits (243), Expect = 7e-23
Identities = 45/113 (39%), Positives = 70/113 (61%), Gaps = 2/113 (1%)
Frame = +1
Query: 175 DLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDI 354
DL +W+ I G + ++GG++ LT+ FP +YP +PPK FT ++HPN+ +G++CL I
Sbjct: 37 DLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSI 96
Query: 355 LRAQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELXR 507
L + W PA+TI ++LL I LL DPN P E ++K D+ +Y + R
Sbjct: 97 LNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVR 149
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 99.5 bits (237), Expect = 4e-22
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 13/130 (10%)
Frame = +1
Query: 172 EDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLD 351
+D F W I GP +P++GG++ T+ FP+DYP PP + F +HPN+ +G++C+
Sbjct: 33 DDFFTWDCLIQGPDGTPFEGGLYPATLKFPSDYPLGPPTLKFECEFFHPNVYKDGTVCIS 92
Query: 352 ILRA-------------QWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKY 492
IL A +WSP ++ K+LLS+ S+L +PN + + ++++ DRE+Y
Sbjct: 93 ILHAPGDDPNMYESSSERWSPVQSVEKILLSVMSMLAEPNDESGANIDACKMWREDREEY 152
Query: 493 NELXREWTTK 522
+ R K
Sbjct: 153 CRVVRRLARK 162
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 96.7 bits (230), Expect = 3e-21
Identities = 42/125 (33%), Positives = 71/125 (56%), Gaps = 13/125 (10%)
Frame = +1
Query: 172 EDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLD 351
+ +F W+ I+GP D+ Y+GG F T+ FP DYP PPK+ FTT I+HPN++ NG +C+
Sbjct: 33 KSIFEWEVMIIGPEDTLYEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNVHPNGEVCIS 92
Query: 352 ILR-------------AQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKY 492
IL +W P + +L+S+ S+L PN + P + A+ ++ + +++
Sbjct: 93 ILHPPGDDKYGYEDAGERWLPVHSPETILISVISMLSSPNDESPANIDAAKEFRENPQEF 152
Query: 493 NELXR 507
+ R
Sbjct: 153 KKRVR 157
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 89.4 bits (212), Expect = 4e-19
Identities = 39/110 (35%), Positives = 64/110 (58%), Gaps = 2/110 (1%)
Frame = +1
Query: 205 GPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSICLDILRAQWSPAL 381
GP ++PY GG++ + + P++YP+K P + F RI+HPNI+ +GS+CLD++ WSP
Sbjct: 38 GPSETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMF 97
Query: 382 TISKVL-LSICSLLCDPNPDDPLVPEIARIYKTDREKYNELXREWTTKYA 528
+ + + + LL PN DPL E A + + Y R++ +YA
Sbjct: 98 DMINIFEVFLPQLLRYPNASDPLNGEAAALLLREPNTYYAKVRDYIARYA 147
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 84.2 bits (199), Expect = 1e-17
Identities = 36/85 (42%), Positives = 51/85 (60%)
Frame = +1
Query: 208 PVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTI 387
P + Y+GG F I +YP PPKV +IYHPNI+ G++CL+ILR W+P L +
Sbjct: 60 PDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGNVCLNILRQDWNPVLNL 119
Query: 388 SKVLLSICSLLCDPNPDDPLVPEIA 462
+ +L+ + L PN +DPL E A
Sbjct: 120 NSILVGLQFLFLSPNAEDPLNKEAA 144
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 65.3 bits (152), Expect = 7e-12
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Frame = +1
Query: 172 EDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICL- 348
E++ W I GP D+PY+GG + T+ FP DYPFKPP + T +N +CL
Sbjct: 32 ENILEWHYIITGPPDTPYEGGQYHGTLIFPPDYPFKPPAIRMITP--SGRFQTNTRLCLS 89
Query: 349 --DILRAQWSPALTISKVLLSICSLL-CDPNPDDPLV--PEIARIYKTDREKYN 495
D W+P+ +S +L+ + S + D +V R Y D +++N
Sbjct: 90 FSDFHPKSWNPSWMVSTILVGLVSFMTSDEITTGGIVTSESTRRTYAKDTKRFN 143
>SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme
Mms2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 50.0 bits (114), Expect = 3e-07
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Frame = +1
Query: 178 LFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSI---C 345
L W ATI+GP S ++ ++ L IH +YP PP V F +RI P ++ G +
Sbjct: 38 LSDWNATILGPAHSVHENRIYSLKIHCDANYPDAPPIVTFVSRINLPGVDGETGKVNPHK 97
Query: 346 LDILRAQWSPALTISKVLLSI 408
+D LR W ++ VLL +
Sbjct: 98 IDCLR-HWKREYSMETVLLDL 117
>SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 803
Score = 27.5 bits (58), Expect = 1.8
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = +1
Query: 373 PALTISKVLLSICSLLCDPNPDD---PLVPEIARIYKTD 480
PA++I LL++ + NP D P+V +I RI+K+D
Sbjct: 344 PAVSIDGTLLNVGDWVLIRNPADSSKPIVSQIYRIWKSD 382
>SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 27.1 bits (57), Expect = 2.4
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Frame = +3
Query: 111 RELQDLGRDPPAQCSAGPHG*RSVPLASHNYG----PS*QSLSRRSFLPYHTFPYRLPFQ 278
RE+ L R+PP + S+ P +A N PS Q + PY P R F
Sbjct: 446 REILTLFRNPPMRLSSEPPSSNGFSIAHPNNSPLRPPSLQGILNAEDRPYEIEPSRSSFA 505
Query: 279 TTKSCIHN 302
T + +N
Sbjct: 506 TNDTGSYN 513
>SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr
1|||Manual
Length = 710
Score = 26.2 bits (55), Expect = 4.1
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 262 TDYPFKPPKVAFTTRIYHPNINSN 333
TD FKP + T +++P+I +N
Sbjct: 113 TDKKFKPNDTSITANVFNPSIQNN 136
>SPBC947.11c |elg1||DNA replication factor C complex subunit
Elg1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 920
Score = 26.2 bits (55), Expect = 4.1
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 367 WSPALTISKVLLSICSLLCDPNPDDPLVPEI 459
+SPA I KVL + L DPN + P++P+I
Sbjct: 291 FSPAPFIQKVLSRL--LPSDPNVEMPMIPQI 319
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +2
Query: 194 PQLWAQLTVLIKEEFSSLPYISLQTTLSNHQ 286
P LWA L + F Y L+T N+Q
Sbjct: 425 PGLWANLATRYRASFMLTDYAGLKTIAYNYQ 455
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -2
Query: 168 RVGLPNIVLVDPCPDL 121
RV L +IV ++PCPD+
Sbjct: 113 RVRLGDIVTINPCPDI 128
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,922,519
Number of Sequences: 5004
Number of extensions: 65606
Number of successful extensions: 185
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 177
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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