Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_K12
(655 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 255 2e-68
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 255 2e-68
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 128 3e-30
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 120 1e-27
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 116 1e-26
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 116 1e-26
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 109 2e-24
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 100 1e-21
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 96 2e-20
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 96 2e-20
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 96 2e-20
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 95 4e-20
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 93 1e-19
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 89 3e-18
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 85 4e-17
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 77 1e-14
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 73 1e-13
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 69 3e-12
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 66 2e-11
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 63 1e-10
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 62 3e-10
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 58 7e-09
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 56 3e-08
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 53 2e-07
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical pr... 48 6e-06
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 43 2e-04
Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z81473-5|CAB03893.2| 139|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z70307-11|CAA94337.1| 488|Caenorhabditis elegans Hypothetical p... 33 0.18
Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical pr... 31 0.71
AF016665-9|AAC71177.1| 363|Caenorhabditis elegans Nuclear hormo... 30 1.2
Z81461-6|CAB03837.1| 272|Caenorhabditis elegans Hypothetical pr... 29 2.2
AF100307-11|AAC68929.1| 304|Caenorhabditis elegans Hypothetical... 29 2.9
U41007-7|AAA82268.3| 516|Caenorhabditis elegans Intramembrane p... 29 3.8
Z92829-13|CAB07344.2| 337|Caenorhabditis elegans Hypothetical p... 28 5.0
AF099917-5|AAC68783.2| 219|Caenorhabditis elegans F-box a prote... 28 6.7
AF003145-6|AAK68678.1| 1420|Caenorhabditis elegans Mtk1/mekk4 ho... 28 6.7
AF003145-5|AAB57718.1| 1418|Caenorhabditis elegans Mtk1/mekk4 ho... 28 6.7
Z77667-6|CAB01235.2| 870|Caenorhabditis elegans Hypothetical pr... 27 8.8
L16685-6|ABD63199.1| 1047|Caenorhabditis elegans Trp (transient ... 27 8.8
L16685-5|AAA28167.3| 1027|Caenorhabditis elegans Trp (transient ... 27 8.8
AJ276027-1|CAC81654.1| 1027|Caenorhabditis elegans TRP homologou... 27 8.8
AF416567-1|AAL27004.1| 870|Caenorhabditis elegans nuclear zinc ... 27 8.8
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 255 bits (625), Expect = 2e-68
Identities = 112/120 (93%), Positives = 117/120 (97%)
Frame = +1
Query: 172 EDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLD 351
+DLFHWQATIMGP +SPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLD
Sbjct: 28 DDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLD 87
Query: 352 ILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELXREWTTKYAM 531
ILR+QWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRE+YN+L REWT KYAM
Sbjct: 88 ILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYAM 147
Score = 55.6 bits (128), Expect = 3e-08
Identities = 32/66 (48%), Positives = 35/66 (53%)
Frame = +3
Query: 90 MALKRINRELQDLGRDPPAQCSAGPHG*RSVPLASHNYGPS*QSLSRRSFLPYHTFPYRL 269
MALKRI +ELQDLGRDPPAQCSAGP G + GP F FP
Sbjct: 1 MALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDY 60
Query: 270 PFQTTK 287
PF+ K
Sbjct: 61 PFKPPK 66
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 255 bits (625), Expect = 2e-68
Identities = 112/120 (93%), Positives = 117/120 (97%)
Frame = +1
Query: 172 EDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLD 351
+DLFHWQATIMGP +SPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLD
Sbjct: 28 DDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLD 87
Query: 352 ILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELXREWTTKYAM 531
ILR+QWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRE+YN+L REWT KYAM
Sbjct: 88 ILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYAM 147
Score = 55.6 bits (128), Expect = 3e-08
Identities = 32/66 (48%), Positives = 35/66 (53%)
Frame = +3
Query: 90 MALKRINRELQDLGRDPPAQCSAGPHG*RSVPLASHNYGPS*QSLSRRSFLPYHTFPYRL 269
MALKRI +ELQDLGRDPPAQCSAGP G + GP F FP
Sbjct: 1 MALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDY 60
Query: 270 PFQTTK 287
PF+ K
Sbjct: 61 PFKPPK 66
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 128 bits (310), Expect = 3e-30
Identities = 58/115 (50%), Positives = 77/115 (66%)
Frame = +1
Query: 184 HWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRA 363
++ I GP DSP+ GGVF L + P +YP PKV F T+IYHPNI+ G ICLDIL+
Sbjct: 35 YFHVMIAGPDDSPFAGGVFKLELFLPEEYPMAAPKVRFMTKIYHPNIDKLGRICLDILKD 94
Query: 364 QWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELXREWTTKYA 528
+WSPAL I VLLSI +LL PNP+DPL ++A +KT+ + + ++WT YA
Sbjct: 95 KWSPALQIRTVLLSIQALLSAPNPEDPLATDVAEQWKTNEAEAIKTAKQWTMNYA 149
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 120 bits (288), Expect = 1e-27
Identities = 56/120 (46%), Positives = 75/120 (62%), Gaps = 1/120 (0%)
Frame = +1
Query: 172 EDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSICL 348
E+L + I GP D+PY GG+F L I P YPF PP V F+T+I+HPN++S G ICL
Sbjct: 34 ENLTEIKGHIRGPPDTPYAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICL 93
Query: 349 DILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELXREWTTKYA 528
DIL+ QW+ +LT+ VLLSI +L+C P P DP +A+ Y + WTTK+A
Sbjct: 94 DILKDQWAASLTLRTVLLSIQALMCTPEPKDPQDAVVAKQYMEKPAVFKATAEYWTTKFA 153
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 116 bits (279), Expect = 1e-26
Identities = 48/116 (41%), Positives = 79/116 (68%)
Frame = +1
Query: 151 VRQAHTAEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 330
V A T +++ W+A I GP ++P++ G F L++ F +YP KPP V F ++++HPN+ +
Sbjct: 24 VSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYA 83
Query: 331 NGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNE 498
+GSICLDIL+ +WSP ++ +L SI SLL +PNP+ P A++Y+ +R +Y +
Sbjct: 84 DGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRREYEK 139
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 116 bits (279), Expect = 1e-26
Identities = 48/116 (41%), Positives = 79/116 (68%)
Frame = +1
Query: 151 VRQAHTAEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 330
V A T +++ W+A I GP ++P++ G F L++ F +YP KPP V F ++++HPN+ +
Sbjct: 24 VSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYA 83
Query: 331 NGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNE 498
+GSICLDIL+ +WSP ++ +L SI SLL +PNP+ P A++Y+ +R +Y +
Sbjct: 84 DGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRREYEK 139
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 109 bits (262), Expect = 2e-24
Identities = 48/119 (40%), Positives = 73/119 (61%), Gaps = 1/119 (0%)
Frame = +1
Query: 175 DLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDI 354
+L W ++ P PY G F + I FP DYPFKPPKVAF T+IYHPN++ G CL I
Sbjct: 31 NLLKWTVLLI-PDKEPYNKGAFKVGITFPVDYPFKPPKVAFETKIYHPNVDEEGKFCLPI 89
Query: 355 LRAQ-WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELXREWTTKYA 528
+ A+ W PA +V++++ SL+ +P P P+ ++A ++ D +K+ + E T K+A
Sbjct: 90 VTAENWKPATKTEQVMMALLSLINEPEPSHPIRADVAEEFQKDHKKFMKTAEEHTRKHA 148
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 100 bits (239), Expect = 1e-21
Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 14/148 (9%)
Frame = +1
Query: 100 KELIGNYKIWAGIHQHNVRQAHTAED-LFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPF 276
K L+ YK + A ED F W+ I GP ++ + GVF I FP DYP
Sbjct: 7 KRLMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITFPQDYPL 66
Query: 277 KPPKVAFTTRIYHPNINSNGSICLDILRA-------------QWSPALTISKVLLSICSL 417
PPK+ FT I+HPNI ++G +C+ IL A +WSP +I K+LLS+ S+
Sbjct: 67 SPPKMRFTCGIFHPNIYADGRVCISILHAPGDDPTGYELSNERWSPVQSIEKILLSVVSM 126
Query: 418 LCDPNPDDPLVPEIARIYKTDREKYNEL 501
L +PN + P A++++ DR ++ ++
Sbjct: 127 LAEPNDESPANVSAAKMWREDRAQFEKI 154
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 95.9 bits (228), Expect = 2e-20
Identities = 46/125 (36%), Positives = 70/125 (56%), Gaps = 13/125 (10%)
Frame = +1
Query: 175 DLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDI 354
D++ W+ ++GP D+ Y+GG F + FP DYP KPPK+ F + I+HPNI+ G++C+ I
Sbjct: 32 DIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISI 91
Query: 355 L-------------RAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYN 495
L +W P T+ +LLS+ S+L DPN + P + A K RE Y
Sbjct: 92 LHDPGDDKWGYERPEERWLPVHTVETILLSVISMLTDPNFESPANVDAA---KMQRENYA 148
Query: 496 ELXRE 510
E ++
Sbjct: 149 EFKKK 153
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 95.9 bits (228), Expect = 2e-20
Identities = 43/128 (33%), Positives = 75/128 (58%), Gaps = 2/128 (1%)
Frame = +1
Query: 151 VRQAHTAEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 330
V+ A +LF+W+ I G D+ ++GG++ + + F D+P PPK F ++HPN+
Sbjct: 29 VKNADGTLNLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYP 88
Query: 331 NGSICLDIL--RAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELX 504
+G++CL +L W P+++I ++L+ I LL PN +DP E +IY +R +Y +
Sbjct: 89 SGTVCLSLLDENKDWKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRV 148
Query: 505 REWTTKYA 528
++ KYA
Sbjct: 149 KKEAVKYA 156
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 95.9 bits (228), Expect = 2e-20
Identities = 43/128 (33%), Positives = 75/128 (58%), Gaps = 2/128 (1%)
Frame = +1
Query: 151 VRQAHTAEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 330
V+ A +LF+W+ I G D+ ++GG++ + + F D+P PPK F ++HPN+
Sbjct: 29 VKNADGTLNLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYP 88
Query: 331 NGSICLDIL--RAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELX 504
+G++CL +L W P+++I ++L+ I LL PN +DP E +IY +R +Y +
Sbjct: 89 SGTVCLSLLDENKDWKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRV 148
Query: 505 REWTTKYA 528
++ KYA
Sbjct: 149 KKEAVKYA 156
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 95.1 bits (226), Expect = 4e-20
Identities = 49/126 (38%), Positives = 71/126 (56%), Gaps = 16/126 (12%)
Frame = +1
Query: 199 IMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVA---------------FTTRIYHPNINSN 333
I GP +PY GG F + + P YPF+PPKV F TRI+HPNI+S
Sbjct: 57 IKGPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQ 116
Query: 334 -GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELXRE 510
G+ICLDIL+ +W+ +LT+ VLLS+ ++LC P P DP +A+ + + +
Sbjct: 117 TGTICLDILKDKWTASLTLRTVLLSLQAMLCSPEPSDPQDAVVAKQFINNYPMFTATAVY 176
Query: 511 WTTKYA 528
WT+ +A
Sbjct: 177 WTSYFA 182
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 93.5 bits (222), Expect = 1e-19
Identities = 44/130 (33%), Positives = 73/130 (56%), Gaps = 13/130 (10%)
Frame = +1
Query: 172 EDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLD 351
++LF W I GP + YQGG F +I FP++YP+ PP + FTT+++HPN+ NG +C+
Sbjct: 37 DNLFVWTVGIYGPPKTLYQGGYFKASIRFPSNYPYSPPSMKFTTKVWHPNVYENGDLCIS 96
Query: 352 ILRA-------------QWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKY 492
IL + +W+P ++ +LLS+ SLL +PN P + + +Y+ +E
Sbjct: 97 ILHSPIDDPQSGELACERWNPTQSVRTILLSVISLLNEPNTSSPANVDASVMYRKWKEDQ 156
Query: 493 NELXREWTTK 522
+ + TK
Sbjct: 157 DPEYAKIVTK 166
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 88.6 bits (210), Expect = 3e-18
Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 2/132 (1%)
Frame = +1
Query: 139 HQHNVRQAHTAEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHP 318
H H V+ + + GP D+ Y+ GV+ + + P YPFK P + F +I+HP
Sbjct: 22 HNHEVQIVNGCSEFI---VRFHGPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHP 78
Query: 319 NIN-SNGSICLDILRAQWSPALTISKVL-LSICSLLCDPNPDDPLVPEIARIYKTDREKY 492
NI+ ++G++CLD++ W+ ++ + + LL PN DPL E AR+Y E+Y
Sbjct: 79 NIDEASGTVCLDVINQAWTALYDLTNIFDTFLPQLLTYPNAADPLNGEAARLYIHKPEEY 138
Query: 493 NELXREWTTKYA 528
RE+ ++A
Sbjct: 139 RRTCREYVMRFA 150
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 85.0 bits (201), Expect = 4e-17
Identities = 43/115 (37%), Positives = 67/115 (58%), Gaps = 2/115 (1%)
Frame = +1
Query: 190 QATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSICL-DILRA 363
Q I G ++PY+GG+F L I YPFK P V F T+I+HP+++ +G+ICL D+
Sbjct: 382 QGIIKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICLHDVDNG 441
Query: 364 QWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELXREWTTKYA 528
W ++TI KVL+ I S + + N +P+ EI +RE + + WT ++A
Sbjct: 442 VWPVSMTIYKVLIVIQSWMSNFNEKEPIDVEILEQATNNREVFEKTAEFWTKRFA 496
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 77.0 bits (181), Expect = 1e-14
Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Frame = +1
Query: 151 VRQAHTAEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFT--TRIYHPNI 324
V T+ DL W+ ++G + Y G VF L F YPF P+V F T HP+I
Sbjct: 26 VDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQFTFGPQYPFNSPEVMFVGETIPAHPHI 85
Query: 325 NSNGSICLDILRAQWSPALTISKVLLSICSLL 420
SNG ICL IL W+PAL++ V LSI S+L
Sbjct: 86 YSNGHICLSILSDDWTPALSVQSVCLSILSML 117
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 73.3 bits (172), Expect = 1e-13
Identities = 40/113 (35%), Positives = 62/113 (54%), Gaps = 7/113 (6%)
Frame = +1
Query: 208 PVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQ------W 369
P + Y+GG F I P +Y PP V T+++HPNIN +GSICL ILR W
Sbjct: 67 PQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYGW 126
Query: 370 SPALTISKVLLSICSLLCD-PNPDDPLVPEIARIYKTDREKYNELXREWTTKY 525
P ++ V+ + SL D + +D L + A+++ +RE +N RE+ ++Y
Sbjct: 127 RPTRNLTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNRESFNHRVREYISRY 179
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 68.9 bits (161), Expect = 3e-12
Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
Frame = +1
Query: 187 WQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQ 366
W T+ GP SP++GG + ++++F +P PP F T ++HPN++ GSI L +L +
Sbjct: 71 WICTVPGPRGSPWEGGEYEVSVNFHK-WPIIPPICEFKTPLHHPNVDLRGSIYLKMLEQE 129
Query: 367 -WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELXR--EWT 516
WS ++ K+L I +LL P+ E Y+ RE Y R WT
Sbjct: 130 HWSSETSLKKLLREISNLLATPDLTQAANIEAWMEYENQRENYEAKARAYAWT 182
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 66.1 bits (154), Expect = 2e-11
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 12/82 (14%)
Frame = +1
Query: 199 IMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTR-----IYHPNINSNGSICLDIL-- 357
I GP D+PY G+F I FPT YPF PPK AF T ++PN+ ++G ICL IL
Sbjct: 449 ISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGT 508
Query: 358 -----RAQWSPALTISKVLLSI 408
+W+P ++ +VL+SI
Sbjct: 509 WEGRPEEKWNPYCSLMQVLVSI 530
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 63.3 bits (147), Expect = 1e-10
Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
Frame = +1
Query: 154 RQAHTAEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS- 330
R+ +D+F ++ G + Y+ +F LT+ +YPFKPP + F +YHPN++
Sbjct: 37 RKIEKCKDIFQFKIIGDGVL---YKNMIFTLTLDVNVEYPFKPPYLKFCHNVYHPNVDPV 93
Query: 331 NGSICLD-ILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDR----EKYN 495
+C +L+ W P T+ VLL++ LL +P+ P+ + A Y ++ +K
Sbjct: 94 TCELCSPMLLQENWKPETTMEDVLLNLIVLLNEPDLSRPVNIDAAHDYIHNKVEFVKKST 153
Query: 496 ELXREW 513
EL ++W
Sbjct: 154 ELAKKW 159
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 62.1 bits (144), Expect = 3e-10
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Frame = +1
Query: 151 VRQAHTAEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 330
++ A ++ W+ I+G +PY+GG++ + FP D+PFKPP + T + +
Sbjct: 28 MKAAPLETNILEWRYIIIGAPKTPYEGGIYMGKLLFPKDFPFKPPAILMLTP--NGRFQT 85
Query: 331 NGSICLDILRAQ---WSPALTISKVLLSICSLLCDPNP 435
N +CL I W+PA T+S ++ + S + D P
Sbjct: 86 NTRLCLSISDYHPDTWNPAWTVSTIITGLMSFMNDNQP 123
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 57.6 bits (133), Expect = 7e-09
Identities = 22/27 (81%), Positives = 26/27 (96%)
Frame = +1
Query: 172 EDLFHWQATIMGPVDSPYQGGVFFLTI 252
+DL+HWQATIMGP +SPYQGG+FFLTI
Sbjct: 28 DDLYHWQATIMGPPESPYQGGIFFLTI 54
Score = 48.0 bits (109), Expect = 6e-06
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = +3
Query: 90 MALKRINRELQDLGRDPPAQCSAGPHG 170
MALKRI +EL DLGRDPPAQCS G G
Sbjct: 1 MALKRIQKELHDLGRDPPAQCSTGSVG 27
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 55.6 bits (128), Expect = 3e-08
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Frame = +1
Query: 172 EDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLD 351
++LF W TI G + + ++GG++ I FP DYP KPP + T + N +CL
Sbjct: 36 DNLFEWHFTIRGTLGTDFEGGIYHGRIIFPADYPMKPPNLILLTP--NGRFELNKKVCLS 93
Query: 352 IL---RAQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELXREWTTK 522
I W P+ +I LL++ L P+ + + K +R++ +L EW K
Sbjct: 94 ISGYHPETWLPSWSIRTALLALIGFL--PSTPGGALGSLDYPPK-ERQRLAKLSCEWKCK 150
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/120 (22%), Positives = 57/120 (47%), Gaps = 6/120 (5%)
Frame = +1
Query: 172 EDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICL- 348
+++ W + G D+P+ GG ++ + F ++P+ PP + T + +N +CL
Sbjct: 46 DNILEWHYCLRGSPDTPFYGGYYWGKVIFKENFPWSPPAITMITP--NGRFQTNTRLCLS 103
Query: 349 --DILRAQWSPALTISKVLLSICSLLCDPNPDDPLV---PEIARIYKTDREKYNELXREW 513
D W+P T+S +L+ + S + + +P + P+ R+Y +++N W
Sbjct: 104 ISDYHPESWNPGWTVSAILIGLHSFMNENSPAAGSIAGTPQDQRMYAAASKEFNVKVYNW 163
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 52.4 bits (120), Expect = 3e-07
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Frame = +1
Query: 178 LFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSI---C 345
L W A+I+GP +PY+ ++ L I +YP +PP V FTT+++ +N SNG I
Sbjct: 38 LTRWTASIIGPPRTPYESRIYNLQIQCGGNYPREPPTVRFTTKVHMVGVNQSNGVIDKRN 97
Query: 346 LDILRAQWSPALTISKVLLSI 408
L LR WS + I VL I
Sbjct: 98 LTTLR-NWSNSYMIKTVLEDI 117
>Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical
protein F26H9.7 protein.
Length = 219
Score = 48.0 bits (109), Expect = 6e-06
Identities = 42/137 (30%), Positives = 59/137 (43%), Gaps = 11/137 (8%)
Frame = +1
Query: 151 VRQAHTAEDLFHWQATIMGPVDSPYQGGVFFLTIHF-PTDYPFKPPKVAFTTRIYHPNIN 327
+R T + LFH I GPV S Y+GG FF I+ P P+V F T I+HPN+
Sbjct: 54 MRIDETKQLLFH--VIIDGPVGSIYEGGTFFADINIQPYQNHSLIPRVCFHTFIFHPNLG 111
Query: 328 SNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPD----------DPLVPEIARIYKT 477
G+ D+ QW + + I + + D D P I+R+ K
Sbjct: 112 KYGN--WDMRGIQWERRSNLEVLYNFIVEGMRNVKYDIERRNLAQLEDMSQPNISRLAKE 169
Query: 478 DREKYNELXREWTTKYA 528
D K+ RE+ K A
Sbjct: 170 DWPKFERTAREFVMKMA 186
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +1
Query: 199 IMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN-SNGSICLD 351
I GP D+PY+ GVF + + FP +YP P++ F T I++ + S G + ++
Sbjct: 35 IAGPADTPYETGVFEVDLTFPDNYPNALPQIKFQTLIWNCAVEPSTGQVHIE 86
>Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical
protein Y69H2.6 protein.
Length = 292
Score = 39.9 bits (89), Expect = 0.002
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Frame = +1
Query: 223 YQGGVFFLTIHFPTDYPFKP--PKVAFT-TRIYHPNI-NSNGSICLDILRAQ-WSP---A 378
+ GG+F IH P ++P P+V F + ++HP I + +CL+ + W +
Sbjct: 62 FGGGIFRFNIHIPLEFPDASDLPRVIFEQSNLFHPLICTKSKELCLNRSFPEGWKKEKHS 121
Query: 379 LTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELXRE 510
L V+L D + D + PE + +YK R+K+ E+ +E
Sbjct: 122 LRRVLVVLQRSFYSYDVDTDKCINPEASVLYKEHRDKFREIAKE 165
>Z81473-5|CAB03893.2| 139|Caenorhabditis elegans Hypothetical
protein C17D12.5 protein.
Length = 139
Score = 33.5 bits (73), Expect = 0.13
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +1
Query: 238 FFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSL 417
+ +T+ P +PF PP + T + N L + QW P+ I VL+ CS+
Sbjct: 51 YIVTVAIPPKFPFSPPAITCKT-------DKNMKF-LFLEENQWKPSTGIVAVLIEACSV 102
Query: 418 LC--DPNPDDPLVPEI 459
+ D P P++P I
Sbjct: 103 ISRRDLVPRAPVLPRI 118
>Z70307-11|CAA94337.1| 488|Caenorhabditis elegans Hypothetical
protein C39E9.10 protein.
Length = 488
Score = 33.1 bits (72), Expect = 0.18
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 206 PIIVACQWNRSSAVWACRTLCWWIPAQI 123
P +VAC W ++ V+ TL WW P I
Sbjct: 224 PTLVACTWGYTALVFVSGTLSWWEPTVI 251
>Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical protein
F46C3.3 protein.
Length = 2557
Score = 31.1 bits (67), Expect = 0.71
Identities = 17/67 (25%), Positives = 33/67 (49%)
Frame = +2
Query: 230 EEFSSLPYISLQTTLSNHQKLHSQHVFIILT*TVMVPSVLTFCVHSGHQRSPYPKCCSQS 409
EE++ + + T Q Q+V +++T ++M PS++T + G Q + P+
Sbjct: 1202 EEYTPMNFAPPPTFTYPQQMPMMQYVPVMMTSSMMTPSMMTPSMMPGQQIAMVPQQMMMQ 1261
Query: 410 AHFYAIP 430
HF +P
Sbjct: 1262 PHFSYVP 1268
>AF016665-9|AAC71177.1| 363|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 166 protein.
Length = 363
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +1
Query: 241 FLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSIC 411
F I+ P P + ++ +I + +++ + D LR QW P ++ KVL+ C
Sbjct: 300 FCLINNPRSAPSRLLEIISINQILNRQFHASYKL-FDALRKQWDPTMSFQKVLVESC 355
>Z81461-6|CAB03837.1| 272|Caenorhabditis elegans Hypothetical
protein C04F12.8 protein.
Length = 272
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +1
Query: 292 AFTTRIYHPNINSNGSICLDILRAQWSP-ALTISKVLLSICSLLCDPNPDDPLVPEIARI 468
AF+ Y P+++S S+ LR +SP +L S + L+ L P P + +
Sbjct: 200 AFSASTYRPSVSSASSLATSSLRRAYSPSSLPASSLALTTSYSLFSPAPTRKPRQSLFSM 259
Query: 469 YKT 477
Y T
Sbjct: 260 YST 262
>AF100307-11|AAC68929.1| 304|Caenorhabditis elegans Hypothetical
protein T12B5.3 protein.
Length = 304
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = -2
Query: 279 FERVVCREMYGKEENSSLIRTVNWA--HNCGLPMEQIF 172
FER+ C E + +N+ T W HNC +P+EQ+F
Sbjct: 185 FERLACLEQW---KNAKTFETP-WVLVHNCQIPIEQLF 218
>U41007-7|AAA82268.3| 516|Caenorhabditis elegans Intramembrane
protease (impas)family protein 3 protein.
Length = 516
Score = 28.7 bits (61), Expect = 3.8
Identities = 8/32 (25%), Positives = 20/32 (62%)
Frame = -3
Query: 569 CVYVLLMSQLTHHMAYFVVHSRXNSLYFSLSV 474
C++++L+ + HM+++ + + +Y SL V
Sbjct: 315 CIHIILLESFSQHMSFYFYYHEESMMYASLLV 346
>Z92829-13|CAB07344.2| 337|Caenorhabditis elegans Hypothetical
protein F10A3.6 protein.
Length = 337
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 379 LTISKVLLSICSLLCDPNP--DDPLVPEIARIYKTDREKYNELXREW 513
++IS + S+C + P+P D+ +PE + Y + E+YN L ++
Sbjct: 140 ISISFLWFSMCYFVNGPSPMKDENFLPEFQKNYCMEPEEYNYLGPQY 186
>AF099917-5|AAC68783.2| 219|Caenorhabditis elegans F-box a protein
protein 24 protein.
Length = 219
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 409 CSLLCDPNPDDPLVPEIARIYKTDREKYNELXREWTTKYAM**VNCD 549
C + CD + +P+ EIA+++K D NE E++ A + C+
Sbjct: 161 CRINCDKSKSNPI--EIAKVFKPDYAGGNEFLIEYSIDNANFVIKCN 205
>AF003145-6|AAK68678.1| 1420|Caenorhabditis elegans Mtk1/mekk4
homolog protein 1, isoformb protein.
Length = 1420
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +1
Query: 355 LRAQWSPALTISKVLLSICSLLCDPNPD--DPLVPEIARIYKTDR 483
L +WS A+ +K + S LLC D + L+ E+ +Y D+
Sbjct: 606 LEMEWSSAVQCAKSVKSALELLCTTYCDIVESLIREVVEVYADDQ 650
>AF003145-5|AAB57718.1| 1418|Caenorhabditis elegans Mtk1/mekk4
homolog protein 1, isoforma protein.
Length = 1418
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +1
Query: 355 LRAQWSPALTISKVLLSICSLLCDPNPD--DPLVPEIARIYKTDR 483
L +WS A+ +K + S LLC D + L+ E+ +Y D+
Sbjct: 606 LEMEWSSAVQCAKSVKSALELLCTTYCDIVESLIREVVEVYADDQ 650
>Z77667-6|CAB01235.2| 870|Caenorhabditis elegans Hypothetical
protein M04B2.1 protein.
Length = 870
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 382 TISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNE 498
TIS +C LL + +P+ PL I R++ +R K ++
Sbjct: 303 TISFPPSQVCDLLIEHDPEMPLTKVINRMFGEERPKLSD 341
>L16685-6|ABD63199.1| 1047|Caenorhabditis elegans Trp (transient
receptor potential)channel family protein 1, isoform b
protein.
Length = 1047
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +3
Query: 366 VVTSAHHIQSVALNLLTSMRSQPRRPFG 449
+V S+ HI +V +++ +M + RRP+G
Sbjct: 834 IVRSSSHIDAVKRDIMRTMSTTSRRPYG 861
>L16685-5|AAA28167.3| 1027|Caenorhabditis elegans Trp (transient
receptor potential)channel family protein 1, isoform a
protein.
Length = 1027
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +3
Query: 366 VVTSAHHIQSVALNLLTSMRSQPRRPFG 449
+V S+ HI +V +++ +M + RRP+G
Sbjct: 814 IVRSSSHIDAVKRDIMRTMSTTSRRPYG 841
>AJ276027-1|CAC81654.1| 1027|Caenorhabditis elegans TRP homologous
cation channel proteinprotein.
Length = 1027
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +3
Query: 366 VVTSAHHIQSVALNLLTSMRSQPRRPFG 449
+V S+ HI +V +++ +M + RRP+G
Sbjct: 814 IVRSSSHIDAVKRDIMRTMSTTSRRPYG 841
>AF416567-1|AAL27004.1| 870|Caenorhabditis elegans nuclear zinc
finger protein protein.
Length = 870
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 382 TISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNE 498
TIS +C LL + +P+ PL I R++ +R K ++
Sbjct: 303 TISFPPSQVCDLLIEHDPEMPLTKVINRMFGEERPKLSD 341
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,521,188
Number of Sequences: 27780
Number of extensions: 383112
Number of successful extensions: 1143
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1122
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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