Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_K08
         (644 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_02_0006 + 7274148-7274986,7275636-7277586                           31   1.0  
10_08_0017 - 14144042-14144614,14144727-14145059                       30   1.4  
03_05_0823 - 27970038-27970258,27970279-27970544,27970608-279706...    29   4.2  

>11_02_0006 + 7274148-7274986,7275636-7277586
          Length = 929

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
 Frame = -3

Query: 603 PPICLQKYHFR--RDFHSFAK-RKSYXLSIAFLEIFRISRTTQRQARMILS 460
           PPI LQK+ +R  R F SF K  K   + +A+L+ FRI R  ++   ++ S
Sbjct: 756 PPILLQKFEYRGVRYFSSFPKWIKHSLVDLAYLD-FRIERMERKDLHVLES 805


>10_08_0017 - 14144042-14144614,14144727-14145059
          Length = 301

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
 Frame = +3

Query: 297 RDVYMXFAILLSNEQKRXKLKEFGLXLPPW----YKLYHWKTTKKREPIP 434
           +D  +   +  S +  R  L++ GL LPPW    Y    W +   REP P
Sbjct: 230 KDDRLRLLVAASADAARASLRKRGLHLPPWRKPEYMRAKWLSPYDREPAP 279


>03_05_0823 -
           27970038-27970258,27970279-27970544,27970608-27970657,
           27971272-27971538,27971633-27972001,27972373-27973278
          Length = 692

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 17/41 (41%), Positives = 20/41 (48%)
 Frame = +3

Query: 135 ISTIFCNLILINAAINTENGYCVSKDSCEETKNTFSDKKWL 257
           IS+ FCN I   AAI +   +C   D  E  KN  S   WL
Sbjct: 585 ISSFFCNPICAEAAIYS-LPHCKLGDLTENVKNPISGHIWL 624


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,277,862
Number of Sequences: 37544
Number of extensions: 277168
Number of successful extensions: 599
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 599
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)