Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_K08
         (644 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z36282-1|CAD45602.1|  424|Caenorhabditis elegans Hypothetical pr...    76   2e-14
AF455271-1|AAL65193.1|  424|Caenorhabditis elegans C21ORF80 prot...    76   2e-14
U53336-6|AAA96178.2|  132|Caenorhabditis elegans Hypothetical pr...    30   1.2  
L15314-7|AAF99989.1|  346|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z81124-4|CAB03372.1|  341|Caenorhabditis elegans Hypothetical pr...    27   8.6  
U00036-15|AAK29857.1|  731|Caenorhabditis elegans Hypothetical p...    27   8.6  

>Z36282-1|CAD45602.1|  424|Caenorhabditis elegans Hypothetical
           protein K10G9.3 protein.
          Length = 424

 Score = 76.2 bits (179), Expect = 2e-14
 Identities = 45/107 (42%), Positives = 60/107 (56%)
 Frame = +3

Query: 240 SDKKWLFYDVNPPEGFNLRRDVYMXFAILLSNEQKRXKLKEFGLXLPPWYKLYHWKTTKK 419
           ++KK+L YDVN  EGFNLRRDVYM  A  +     R   + + L LPPW +L+HWK  + 
Sbjct: 39  AEKKFLLYDVNFGEGFNLRRDVYMRVANTV--RSLRDSGENYILVLPPWGRLHHWK--RM 94

Query: 420 REPIPXGNFFDIXSLKSFAPVVELYEIFEKSLKKQLIIXTIYVLQNY 560
              +    FFD+ SL  F PV+E    FE  L +   I  +  LQ+Y
Sbjct: 95  EVALSWRLFFDLESLNRFIPVIE----FEDFLDENRPIDQVIYLQHY 137


>AF455271-1|AAL65193.1|  424|Caenorhabditis elegans C21ORF80
           protein.
          Length = 424

 Score = 76.2 bits (179), Expect = 2e-14
 Identities = 45/107 (42%), Positives = 60/107 (56%)
 Frame = +3

Query: 240 SDKKWLFYDVNPPEGFNLRRDVYMXFAILLSNEQKRXKLKEFGLXLPPWYKLYHWKTTKK 419
           ++KK+L YDVN  EGFNLRRDVYM  A  +     R   + + L LPPW +L+HWK  + 
Sbjct: 39  AEKKFLLYDVNFGEGFNLRRDVYMRVANTV--RSLRDSGENYILVLPPWGRLHHWK--RM 94

Query: 420 REPIPXGNFFDIXSLKSFAPVVELYEIFEKSLKKQLIIXTIYVLQNY 560
              +    FFD+ SL  F PV+E    FE  L +   I  +  LQ+Y
Sbjct: 95  EVALSWRLFFDLESLNRFIPVIE----FEDFLDENRPIDQVIYLQHY 137


>U53336-6|AAA96178.2|  132|Caenorhabditis elegans Hypothetical
           protein K07C11.8 protein.
          Length = 132

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +3

Query: 96  LICCTLII*KMKLISTIFCNLILINAAINTENGYCVSKDSCE 221
           ++CC +    + L+S   C   ++NA    ++ YC S+DS E
Sbjct: 12  IVCCVMFF--LWLLSMAICPDAMVNATSGRKDKYCESRDSKE 51


>L15314-7|AAF99989.1|  346|Caenorhabditis elegans Hypothetical
           protein K06H7.8 protein.
          Length = 346

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 384 WYKLYHWKTTKKREPIPXGNFFDI 455
           W   YHW+  KK+ P   GN F +
Sbjct: 294 WSDPYHWEPEKKKNPASQGNKFGL 317


>Z81124-4|CAB03372.1|  341|Caenorhabditis elegans Hypothetical
           protein T21B4.6 protein.
          Length = 341

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = -3

Query: 225 FPHKSPLIHSNHFQY*LQRLSVLNYKILWKLVSFFILSMYNKLNRINL 82
           F ++S LI  N F     R+    Y+  W L +FF   +++ +N +N+
Sbjct: 129 FENRSSLILRNKF-----RIKGTRYRTYWFLANFFAFMIFSVINFLNI 171


>U00036-15|AAK29857.1|  731|Caenorhabditis elegans Hypothetical
           protein R151.8 protein.
          Length = 731

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -3

Query: 630 VARTDIPXVPPICLQKYHFRRDFHSFAKRK 541
           + +T    VP  C  KYH+R    S +K+K
Sbjct: 434 IEKTKFFDVPKSCCSKYHYREPSSSASKKK 463


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,515,691
Number of Sequences: 27780
Number of extensions: 299326
Number of successful extensions: 693
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)