Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_K02
(656 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0648 - 30844289-30844341,30844536-30844648,30845435-308454... 83 2e-16
05_06_0132 + 25893241-25893435,25894266-25894487,25894567-258948... 79 3e-15
01_01_0645 + 4890647-4890682,4891684-4891929,4892021-4892317,489... 71 1e-12
01_07_0301 + 42607239-42607277,42607374-42607577,42607669-426079... 49 3e-06
03_02_0138 + 5837813-5838490,5839000-5839164,5839289-5839426,583... 38 0.009
12_02_0670 - 21700523-21700932,21701266-21701390,21701476-217016... 31 0.61
12_02_0312 + 17395716-17398112 30 1.4
04_01_0310 + 4197835-4197875,4197994-4198924 29 2.5
01_05_0343 + 21155237-21155496,21155596-21155842,21155939-211560... 29 3.3
01_06_0459 + 29538025-29538579,29539190-29539354,29539448-295395... 29 4.3
03_01_0574 + 4243019-4244284 28 5.7
12_02_0346 - 17776871-17781445 27 9.9
>01_06_0648 -
30844289-30844341,30844536-30844648,30845435-30845484,
30845572-30845642,30845725-30845797,30846744-30846841,
30846936-30847002,30847150-30847230,30847312-30847479,
30847563-30847730,30847813-30848109,30848205-30848426,
30849287-30849325
Length = 499
Score = 83.0 bits (196), Expect = 2e-16
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 2/184 (1%)
Frame = +3
Query: 93 GIQNSRSPPLFVMLRSGRYAQAAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFK 272
G ++S+ PPL V L P + + + + LPN +A+ + SP V +
Sbjct: 39 GEKSSQLPPLDVPLPGITLPPPLPDFVEPSKTKVTTLPNGIKIASETSVSPAASVGLYID 98
Query: 273 AGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVXASGDRXFIYYTLEAT 452
GS YE A G SH+L A +T N S + R++ IG V AS R + YT +A
Sbjct: 99 CGSIYETPASSGASHLLERMAFKSTTNRSHLRLVREVEAIGGNVSASASREQMCYTYDAF 158
Query: 453 QDKLNDALEILNNLVSNQEFRPWELNDNAPRLKYDI--ISLPPQIRAVDLLHKAAYRRGL 626
+ + + +E+L + V N F WE+ + ++K +I +S PQ ++ LH A Y L
Sbjct: 159 KAYVPEMVEVLIDSVRNPAFFNWEIKEQLEKIKAEIAEVSDNPQGLLLEALHSAGYSGAL 218
Query: 627 GNSL 638
L
Sbjct: 219 AKPL 222
>05_06_0132 +
25893241-25893435,25894266-25894487,25894567-25894863,
25894944-25895111,25895201-25895368,25895456-25895536,
25895704-25895770,25895874-25895971,25896587-25896659,
25896753-25896823,25896919-25896968,25897698-25897810,
25898182-25898300,25898629-25898721,25899025-25899051,
25899422-25899823,25900467-25900513,25900612-25900651,
25900733-25900795,25900881-25901018,25901873-25902031,
25902111-25902164,25902324-25902392,25902514-25902643,
25902909-25902949,25903133-25903178,25903200-25903357,
25903560-25903605,25903702-25903853,25904022-25904243
Length = 1202
Score = 79.0 bits (186), Expect = 3e-15
Identities = 54/187 (28%), Positives = 86/187 (45%), Gaps = 2/187 (1%)
Frame = +3
Query: 93 GIQNSRSPPLFVMLRSGRYAQAAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFK 272
G +S+ PPL V L + P + + + + LPN +A+ + P V +
Sbjct: 91 GGNSSQLPPLDVPLPGVIISPPLPDFVEPSKTKITTLPNGIKIASETSPIPAVSVGLYID 150
Query: 273 AGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVXASGDRXFIYYTLEAT 452
GS YE + G SH+L A +T N S + R++ IG V AS R + YT +A
Sbjct: 151 CGSVYETSSSSGTSHLLERMAFKSTTNRSHLRLVREVEAIGGNVFASASREQMSYTYDAL 210
Query: 453 QDKLNDALEILNNLVSNQEFRPWELNDNAPRLKYDI--ISLPPQIRAVDLLHKAAYRRGL 626
+ + +E+L + V N F WE+ + ++K +I +S P ++ LH A Y L
Sbjct: 211 KCYAPEMVEVLIDSVRNPAFLEWEVKEQLQKIKSEISEVSGDPHGLLMEALHSAGYSGAL 270
Query: 627 GNSLFIS 647
L S
Sbjct: 271 AKPLMAS 277
>01_01_0645 +
4890647-4890682,4891684-4891929,4892021-4892317,
4892407-4892574,4892674-4892841,4892924-4893004,
4893105-4893171,4893657-4893751,4894027-4894099,
4894177-4894247,4894325-4894374,4895263-4895375,
4895461-4895513
Length = 505
Score = 70.5 bits (165), Expect = 1e-12
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 2/191 (1%)
Frame = +3
Query: 81 TYENGIQNSRSPPLFVMLRSGRYAQAAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVT 260
T+ G +++ PP L P + + + + + L N +A+ P V
Sbjct: 42 TWLTGARSNALPPPDFTLPGVTIPPPLPDLVEPGKTKITTLANGVKIASETTPGPSCSVG 101
Query: 261 IAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVXASGDRXFIYYT 440
+ GS +E LG + +L+ A TT N S + R++ +G V AS +R + Y+
Sbjct: 102 VYVNCGSVHEAPETLGATQLLKKMAYTTTTNRSHLRVVREIEAVGGNVKASANREMMSYS 161
Query: 441 LEATQDKLNDALEILNNLVSNQEFRPWELNDNAPRLKYDI--ISLPPQIRAVDLLHKAAY 614
A + + + +E+L + V N F WE+ + +LK ++ S P+ ++ LH Y
Sbjct: 162 YAALKTYMPEMVEVLIDCVRNPAFLDWEVKEQIMKLKAELAEASSNPETFLLEALHSTGY 221
Query: 615 RRGLGNSLFIS 647
L L S
Sbjct: 222 SGALATPLIAS 232
>01_07_0301 +
42607239-42607277,42607374-42607577,42607669-42607965,
42608055-42608222,42608393-42608560,42608653-42608733,
42608844-42608910,42609326-42609423,42609665-42609737,
42609826-42609896,42610013-42610062,42610145-42610257,
42610341-42610384
Length = 490
Score = 49.2 bits (112), Expect = 3e-06
Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 2/150 (1%)
Frame = +3
Query: 195 SVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQ 374
+ LPN VA+ D P V + +GS YE G+SH+L + T + S I
Sbjct: 67 TTLPNGVRVASEDLPGPSACVGVFVDSGSVYETAETAGVSHLLERLSFKDTAHRSHLQIV 126
Query: 375 RKLSQIGAYVXASGDRXFIYYTLEATQDKLNDALEILNNLVSNQEFRPWELNDNAPRLKY 554
+ + G + AS R Y+ E + L A+E+L + V N F E+ +
Sbjct: 127 QDVEATGGNIGASASREQTVYSYETLKAYLPQAIEVLIDCVRNPLFLQDEVERQVAFARE 186
Query: 555 DIISLP--PQIRAVDLLHKAAYRRGLGNSL 638
++ L P+ + L+ Y L N L
Sbjct: 187 EVQELQKNPERFLQESLNLVGYTGALANPL 216
>03_02_0138 +
5837813-5838490,5839000-5839164,5839289-5839426,
5839496-5839647,5839754-5839862,5840551-5840649,
5840739-5840804,5840891-5840998,5841820-5841906
Length = 533
Score = 37.5 bits (83), Expect = 0.009
Identities = 37/167 (22%), Positives = 68/167 (40%), Gaps = 9/167 (5%)
Frame = +3
Query: 144 RYAQAAPAVKKDVRIQSS------VLPNKTFVAALDN-GSPVTRVTIAFKAGSRYEPQAE 302
RYA PA I ++ LPN VA + S V + AGSRYE +
Sbjct: 79 RYASPVPAHADHTAILAAPETRVTTLPNGLRVATESSLASRTATVGVWIDAGSRYETEDS 138
Query: 303 LGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVXASGDRXFIYYTLEATQDKLNDALEI 482
G++H + T + ++ ++ ++ IG ++ A R Y + + AL I
Sbjct: 139 AGVAHFVEHMLFKGTGDRNAAQLEEEIENIGGHLNAYTSREQTTYYAKVLDKDVPRALNI 198
Query: 483 LNNLVSNQEFRPWELNDNAPRLKYDIISLPPQIRAV--DLLHKAAYR 617
L +++ + + + + ++ + Q V D LH A++
Sbjct: 199 LADILQHSKLEESRIERERDVILREMEEVEGQYEEVIFDHLHATAFQ 245
>12_02_0670 -
21700523-21700932,21701266-21701390,21701476-21701651,
21702937-21703128
Length = 300
Score = 31.5 bits (68), Expect = 0.61
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +2
Query: 98 PKLSXAPFIRHVTIRALRPSCAGSKERC 181
P+ PF+ ALRPSC S ERC
Sbjct: 33 PRERLPPFVAAAAAAALRPSCRASAERC 60
>12_02_0312 + 17395716-17398112
Length = 798
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/63 (25%), Positives = 36/63 (57%)
Frame = +3
Query: 318 VLRSAAGLTTKNISSFLIQRKLSQIGAYVXASGDRXFIYYTLEATQDKLNDALEILNNLV 497
+++S +G + K ++ +Q+KL ++ SGD+ ++ + + D +ND E++N L
Sbjct: 238 IIQSDSGESNKQLTLEALQKKLHEL------SGDKRYLLVLDDISHDNINDWEELMNLLP 291
Query: 498 SNQ 506
S +
Sbjct: 292 SGR 294
>04_01_0310 + 4197835-4197875,4197994-4198924
Length = 323
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = +3
Query: 441 LEATQDKLND----ALEILNNLVSNQEFRPWELNDNAPRLKYDIISLPPQIRAVDLLHKA 608
LE +KL++ A+++ + +S E+R WEL+ +L +++ R V LL
Sbjct: 46 LEYENNKLSNEKRWAVDVYSRKISTLEYRVWELDHQNNKLSSELVRQTEDTRTVGLLFMN 105
Query: 609 AYRR 620
A R
Sbjct: 106 AADR 109
>01_05_0343 +
21155237-21155496,21155596-21155842,21155939-21156064,
21156291-21156428,21156513-21156650,21156756-21157013,
21157404-21157541,21158023-21158092,21158267-21158480,
21158614-21158719,21159844-21160077,21160836-21161000,
21161083-21161232,21161308-21161399,21161631-21161712,
21161800-21161883,21161980-21162096,21162179-21162289,
21162698-21162892,21164495-21164575,21165671-21165720,
21165978-21165990,21166518-21166600,21166693-21166833,
21166879-21166936,21167023-21167072,21167474-21167582,
21167666-21167727,21168321-21168363
Length = 1204
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 255 VTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGA 398
+++A K GS E + E G++H++ A T ++ I + L IGA
Sbjct: 80 LSLAVKVGSVVEEEDERGVAHIVEHLAFSATSRYTNHDIVKFLESIGA 127
>01_06_0459 +
29538025-29538579,29539190-29539354,29539448-29539585,
29539685-29539836,29539949-29540057,29540281-29540379,
29541051-29541116,29541208-29541315,29541428-29541553
Length = 505
Score = 28.7 bits (61), Expect = 4.3
Identities = 23/108 (21%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = +3
Query: 177 DVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVLRSAAGL-TTKN 353
D R+ + + A + + V + AGSR+E G +H L A TT+
Sbjct: 55 DARVSTLPTGLRIVTQAYPAATRMASVGVWVDAGSRFELPGTNGTAHFLEHMAFKGTTRR 114
Query: 354 ISSFLIQRKLSQIGAYVXASGDRXFIYYTLEATQDKLNDALEILNNLV 497
++ ++ ++ +GA + A R Y + + AL++L++++
Sbjct: 115 PTANALEVEIENMGARLNAYTSREQTTYFADVQGRDVPIALDVLSDIL 162
>03_01_0574 + 4243019-4244284
Length = 421
Score = 28.3 bits (60), Expect = 5.7
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +3
Query: 18 EEEKTPLNHKPLLRYYLKFLKTYENGIQNSRSPPLFVMLRSGR---YAQAAPAVKKDVRI 188
EE TPL +LR L K + SRSP LF + R R +A +P + +
Sbjct: 43 EEHVTPLKRLEILRPQLGLTKPNKVAHFVSRSPQLFEVCRDSRGVMWAGLSPQAEALIEE 102
Query: 189 QSSVLPNKTFVAA 227
++ +L + + AA
Sbjct: 103 EARLLEDHSRTAA 115
>12_02_0346 - 17776871-17781445
Length = 1524
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 266 LQSWLSL*TTSRIGIVACTTISCWTNNQEY**FPYSTQTLSDWSI 400
+Q LSL T +GI C + C +++ Y FP S QTL W++
Sbjct: 1212 IQGLLSLQT---LGIYDCPKLLC-SSSSSYSPFPTSLQTLQLWNV 1252
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,596,759
Number of Sequences: 37544
Number of extensions: 322295
Number of successful extensions: 663
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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