Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_K02
(656 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72514-2|CAA96675.2| 422|Caenorhabditis elegans Hypothetical pr... 91 5e-19
Z67734-5|CAD56227.1| 424|Caenorhabditis elegans Hypothetical pr... 76 2e-14
Z67734-4|CAB54182.1| 410|Caenorhabditis elegans Hypothetical pr... 76 2e-14
AL032678-2|CAC35829.2| 424|Caenorhabditis elegans Hypothetical ... 76 2e-14
AL032678-1|CAB54320.1| 410|Caenorhabditis elegans Hypothetical ... 76 2e-14
AF100306-6|AAC68920.1| 427|Caenorhabditis elegans Hypothetical ... 75 3e-14
Z68270-1|CAA92566.2| 458|Caenorhabditis elegans Hypothetical pr... 49 3e-06
AC025726-19|AAK73925.1| 477|Caenorhabditis elegans Mitochondria... 47 1e-05
U13644-8|AAB52679.1| 471|Caenorhabditis elegans Hypothetical pr... 45 4e-05
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 30 1.3
>Z72514-2|CAA96675.2| 422|Caenorhabditis elegans Hypothetical
protein T10B10.2 protein.
Length = 422
Score = 91.5 bits (217), Expect = 5e-19
Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 1/148 (0%)
Frame = +3
Query: 201 LPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRK 380
L N V +D+ P+ + +AF+AGSRYE + GLSH +R+ G T+ +
Sbjct: 27 LGNGLTVGTIDSHKPIAHLVLAFRAGSRYEKANQAGLSHTIRNFVGRDTQEYFGNTVVWT 86
Query: 381 LSQIGAYVXASGDRXFIYYTLEATQDKLNDALEILNNLVSNQEFRPWELNDNAPRLKYDI 560
LSQ G + + R +L ++ + L +L + N F+PWE+ D P ++ D
Sbjct: 87 LSQTGGVLKSFTSRDLFGVSLTIPRESTSVGLSVLGQVAGNPGFKPWEVEDVLPTMRADN 146
Query: 561 ISLPPQIRAVDLLHKAAYRR-GLGNSLF 641
VD +HKAAYR GLGNS++
Sbjct: 147 GYRTAYDLVVDQIHKAAYRNGGLGNSIY 174
>Z67734-5|CAD56227.1| 424|Caenorhabditis elegans Hypothetical
protein VW06B3R.1b protein.
Length = 424
Score = 76.2 bits (179), Expect = 2e-14
Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 1/161 (0%)
Frame = +3
Query: 144 RYAQAAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVL 323
R+ AA A V+ +++VL N V++++ + + +AF+AGSRY+P + GL+H++
Sbjct: 26 RFVSAA-AKSAGVQEKTTVLENGLRVSSVELNGATSSIVLAFRAGSRYQPANKQGLTHLI 84
Query: 324 RSAAGLTTKNISSFLIQRKLSQIGAYVXASGDRXFIYYTLEATQDKLNDALEILNNLVSN 503
R++ G N + +Q G + A +R + + +D+ L +L L N
Sbjct: 85 RNSVGRDAPNFPGLALVWNTAQNGGNLTAVSNRDVLAIEVNVVRDQSAVVLSLLGQL-GN 143
Query: 504 QEFRPWELND-NAPRLKYDIISLPPQIRAVDLLHKAAYRRG 623
F+PW++ D L D L A + LH+AA+R G
Sbjct: 144 NAFKPWDVEDVKHDTLPADATYLTGTTIAFEQLHQAAFRNG 184
>Z67734-4|CAB54182.1| 410|Caenorhabditis elegans Hypothetical
protein VW06B3R.1a protein.
Length = 410
Score = 76.2 bits (179), Expect = 2e-14
Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 1/161 (0%)
Frame = +3
Query: 144 RYAQAAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVL 323
R+ AA A V+ +++VL N V++++ + + +AF+AGSRY+P + GL+H++
Sbjct: 12 RFVSAA-AKSAGVQEKTTVLENGLRVSSVELNGATSSIVLAFRAGSRYQPANKQGLTHLI 70
Query: 324 RSAAGLTTKNISSFLIQRKLSQIGAYVXASGDRXFIYYTLEATQDKLNDALEILNNLVSN 503
R++ G N + +Q G + A +R + + +D+ L +L L N
Sbjct: 71 RNSVGRDAPNFPGLALVWNTAQNGGNLTAVSNRDVLAIEVNVVRDQSAVVLSLLGQL-GN 129
Query: 504 QEFRPWELND-NAPRLKYDIISLPPQIRAVDLLHKAAYRRG 623
F+PW++ D L D L A + LH+AA+R G
Sbjct: 130 NAFKPWDVEDVKHDTLPADATYLTGTTIAFEQLHQAAFRNG 170
>AL032678-2|CAC35829.2| 424|Caenorhabditis elegans Hypothetical
protein VW06B3R.1b protein.
Length = 424
Score = 76.2 bits (179), Expect = 2e-14
Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 1/161 (0%)
Frame = +3
Query: 144 RYAQAAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVL 323
R+ AA A V+ +++VL N V++++ + + +AF+AGSRY+P + GL+H++
Sbjct: 26 RFVSAA-AKSAGVQEKTTVLENGLRVSSVELNGATSSIVLAFRAGSRYQPANKQGLTHLI 84
Query: 324 RSAAGLTTKNISSFLIQRKLSQIGAYVXASGDRXFIYYTLEATQDKLNDALEILNNLVSN 503
R++ G N + +Q G + A +R + + +D+ L +L L N
Sbjct: 85 RNSVGRDAPNFPGLALVWNTAQNGGNLTAVSNRDVLAIEVNVVRDQSAVVLSLLGQL-GN 143
Query: 504 QEFRPWELND-NAPRLKYDIISLPPQIRAVDLLHKAAYRRG 623
F+PW++ D L D L A + LH+AA+R G
Sbjct: 144 NAFKPWDVEDVKHDTLPADATYLTGTTIAFEQLHQAAFRNG 184
>AL032678-1|CAB54320.1| 410|Caenorhabditis elegans Hypothetical
protein VW06B3R.1a protein.
Length = 410
Score = 76.2 bits (179), Expect = 2e-14
Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 1/161 (0%)
Frame = +3
Query: 144 RYAQAAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVL 323
R+ AA A V+ +++VL N V++++ + + +AF+AGSRY+P + GL+H++
Sbjct: 12 RFVSAA-AKSAGVQEKTTVLENGLRVSSVELNGATSSIVLAFRAGSRYQPANKQGLTHLI 70
Query: 324 RSAAGLTTKNISSFLIQRKLSQIGAYVXASGDRXFIYYTLEATQDKLNDALEILNNLVSN 503
R++ G N + +Q G + A +R + + +D+ L +L L N
Sbjct: 71 RNSVGRDAPNFPGLALVWNTAQNGGNLTAVSNRDVLAIEVNVVRDQSAVVLSLLGQL-GN 129
Query: 504 QEFRPWELND-NAPRLKYDIISLPPQIRAVDLLHKAAYRRG 623
F+PW++ D L D L A + LH+AA+R G
Sbjct: 130 NAFKPWDVEDVKHDTLPADATYLTGTTIAFEQLHQAAFRNG 170
>AF100306-6|AAC68920.1| 427|Caenorhabditis elegans Hypothetical
protein T24C4.1 protein.
Length = 427
Score = 75.4 bits (177), Expect = 3e-14
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 3/175 (1%)
Frame = +3
Query: 132 LRSGRYAQAAPAVK--KDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAEL 305
+RS +++A A+K K + L N V + +N ++++ +AF+AGSRYE +
Sbjct: 1 MRSSFVSKSAAAIKTQKPTGSLKTKLNNGLKVVSQENNGAISQLILAFRAGSRYEKVTQP 60
Query: 306 GLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVXASGDRXFIYYTLEATQDKLNDALEIL 485
GL H +R+ G ++ + + GA + + R + +D+ AL IL
Sbjct: 61 GLVHHVRNFVGRDAQSYPGLQLVWSSAASGANLNSFATRDIFGVQISVARDQAAYALSIL 120
Query: 486 NNLVSNQEFRPWELNDNAPRLKYDIISLPPQIRAVDLLHKAAYRR-GLGNSLFIS 647
++ + F+PWEL D P + D+ P + +H+AA+R L SL+ S
Sbjct: 121 GHVAAKPAFKPWELEDVTPTILADLSQKTPYGIVFEDIHRAAFRNDSLSFSLYSS 175
>Z68270-1|CAA92566.2| 458|Caenorhabditis elegans Hypothetical
protein ZC410.2 protein.
Length = 458
Score = 49.2 bits (112), Expect = 3e-06
Identities = 28/103 (27%), Positives = 51/103 (49%)
Frame = +3
Query: 195 SVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQ 374
+ LPN VA + G + + AGSRYE + G +H L A T + ++
Sbjct: 33 TTLPNGFRVATENTGGSTATIGVFIDAGSRYENEKNNGTAHFLEHMAFKGTPRRTRMGLE 92
Query: 375 RKLSQIGAYVXASGDRXFIYYTLEATQDKLNDALEILNNLVSN 503
++ IGA++ A R Y + +KL+ +++IL++++ N
Sbjct: 93 LEVENIGAHLNAYTSRESTTYYAKCFTEKLDQSVDILSDILLN 135
>AC025726-19|AAK73925.1| 477|Caenorhabditis elegans Mitochondrial
processing peptidasealpha protein 1 protein.
Length = 477
Score = 46.8 bits (106), Expect = 1e-05
Identities = 34/145 (23%), Positives = 64/145 (44%), Gaps = 6/145 (4%)
Frame = +3
Query: 201 LPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISS-FLIQR 377
LPN V D V +A ++G RYE G+S ++ A ++++ SS +
Sbjct: 24 LPNGLKVCTEDTYGDFVTVGVAIESGCRYENGFPFGISRIVEKLAYNSSESFSSRDEVFA 83
Query: 378 KLSQIGAYVXASGDRXFIYYTLEATQDKLNDALEILNNLVSNQEFRPWELNDNAPRLKYD 557
KL + V R + Y +D ++ + +L++ + F L + Y+
Sbjct: 84 KLEENSGIVDCQSTRDTMMYAASCHRDGVDSVIHVLSDTIWKPIFDEQSLEQAKLTVSYE 143
Query: 558 IISLPPQIRAVDLL-----HKAAYR 617
LP +I A+++L H+AA++
Sbjct: 144 NQDLPNRIEAIEILLTDWIHQAAFQ 168
>U13644-8|AAB52679.1| 471|Caenorhabditis elegans Hypothetical
protein F56D2.1 protein.
Length = 471
Score = 45.2 bits (102), Expect = 4e-05
Identities = 37/177 (20%), Positives = 78/177 (44%), Gaps = 3/177 (1%)
Frame = +3
Query: 96 IQNSRSPPLFVMLRSGRYAQAAPAVKKDV-RIQSSVLPNKTFVAALDNGSPVTRVTIAFK 272
+ ++ P L +R+ A + V + + + L N V DNGS V + +
Sbjct: 7 VSSALRPALNSQVRNASSAVSVKDVLASAPQAEVTTLKNGFRVVTEDNGSATATVGVWIE 66
Query: 273 AGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVXASGDRXFIYYTLEAT 452
GSR+E + G++H L T +S ++ +L+ IGA + + +R ++A
Sbjct: 67 TGSRFENEKNNGVAHFLERLIHKGTGKRASAALESELNAIGAKLNSFTERDQTAVFVQAG 126
Query: 453 QDKLNDALEILNNLVSNQEFRPWELNDNAPRLKYDIISLPP--QIRAVDLLHKAAYR 617
+ ++IL +++ N + ++ L ++ + Q+ D+LH A ++
Sbjct: 127 AQDVEKVVDILADVLRNSKLEASTIDTERVNLLKELEASDDYHQLVLFDMLHAAGFQ 183
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 30.3 bits (65), Expect = 1.3
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +3
Query: 87 ENGIQNSRSPPLFVMLRSGRYAQAAPAVKKDVRIQSSVLPNKTFVAALDNGSPV---TRV 257
E G Q S+ P + L++G A PA KK+ ++ LPN TF L NG P+ R+
Sbjct: 5163 EQGEQPSK-PKFVIPLKTGA---ALPADKKEFNVKVRGLPNPTFQWFL-NGIPIKLDDRI 5217
Query: 258 TIAFKAGSRY 287
T+ A Y
Sbjct: 5218 TLDDMADGNY 5227
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,263,554
Number of Sequences: 27780
Number of extensions: 282529
Number of successful extensions: 699
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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