Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_J21
         (625 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024880-7|AAF60911.1|  124|Caenorhabditis elegans Hypothetical ...    62   4e-10
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso...    27   8.2  
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso...    27   8.2  
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor...    27   8.2  
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor...    27   8.2  
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor...    27   8.2  
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor...    27   8.2  
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor...    27   8.2  

>AC024880-7|AAF60911.1|  124|Caenorhabditis elegans Hypothetical
           protein Y97E10AR.7 protein.
          Length = 124

 Score = 61.7 bits (143), Expect = 4e-10
 Identities = 40/114 (35%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
 Frame = +3

Query: 99  QANTGGVENTLLLNHQGALLAYSGYNDK--DARVTAAIASNVWSAYEKHGXNVFKEXGLH 272
           Q NT GV+ + L N +G LLAY G   K   + V++A+ ++VW+A E+   N  KE  L 
Sbjct: 13  QVNTSGVDGSWLFNKEGLLLAYVGSEQKAVASNVSSALIASVWAALERRA-NDLKETILV 71

Query: 273 LILXXCLNGKIAITQVA-NLLLCLYANEAVGFGILKEKINAIAQYLXGPLKQVA 431
           L      NG I  T VA  +LL + A+++   G+++ K++ +A YL  P+  ++
Sbjct: 72  L-----ENGVIGCTLVARTMLLAVKADKSADLGMVRAKLHTLAAYLEQPILSIS 120


>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
            abnormality protein1, isoform g protein.
          Length = 1604

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +2

Query: 290  FKWENCNHTSCQFITVSLCE*GCWFWHSERKNQCYC 397
            F +  C   S +F+TVS CE  C+ ++S  + +  C
Sbjct: 1159 FAYSGCGGNSNRFMTVSQCENLCFAFNSMNEAEVDC 1194


>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
            abnormality protein1, isoform f protein.
          Length = 1818

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +2

Query: 290  FKWENCNHTSCQFITVSLCE*GCWFWHSERKNQCYC 397
            F +  C   S +F+TVS CE  C+ ++S  + +  C
Sbjct: 1373 FAYSGCGGNSNRFMTVSQCENLCFAFNSMNEAEVDC 1408


>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
            abnormality protein1, isoform e protein.
          Length = 1954

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +2

Query: 290  FKWENCNHTSCQFITVSLCE*GCWFWHSERKNQCYC 397
            F +  C   S +F+TVS CE  C+ ++S  + +  C
Sbjct: 1509 FAYSGCGGNSNRFMTVSQCENLCFAFNSMNEAEVDC 1544


>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
            abnormality protein1, isoform b protein.
          Length = 1685

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +2

Query: 290  FKWENCNHTSCQFITVSLCE*GCWFWHSERKNQCYC 397
            F +  C   S +F+TVS CE  C+ ++S  + +  C
Sbjct: 1558 FAYSGCGGNSNRFMTVSQCENLCFAFNSMNEAEVDC 1593


>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
            abnormality protein1, isoform d protein.
          Length = 1995

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +2

Query: 290  FKWENCNHTSCQFITVSLCE*GCWFWHSERKNQCYC 397
            F +  C   S +F+TVS CE  C+ ++S  + +  C
Sbjct: 1550 FAYSGCGGNSNRFMTVSQCENLCFAFNSMNEAEVDC 1585


>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
            abnormality protein1, isoform h protein.
          Length = 2006

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +2

Query: 290  FKWENCNHTSCQFITVSLCE*GCWFWHSERKNQCYC 397
            F +  C   S +F+TVS CE  C+ ++S  + +  C
Sbjct: 1561 FAYSGCGGNSNRFMTVSQCENLCFAFNSMNEAEVDC 1596


>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
            abnormality protein1, isoform a protein.
          Length = 2007

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +2

Query: 290  FKWENCNHTSCQFITVSLCE*GCWFWHSERKNQCYC 397
            F +  C   S +F+TVS CE  C+ ++S  + +  C
Sbjct: 1562 FAYSGCGGNSNRFMTVSQCENLCFAFNSMNEAEVDC 1597


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,527,040
Number of Sequences: 27780
Number of extensions: 198438
Number of successful extensions: 367
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 367
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)