Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_J21
         (625 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          24   1.4  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      24   1.4  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   4.2  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   5.6  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/34 (29%), Positives = 21/34 (61%)
 Frame = +3

Query: 177 DKDARVTAAIASNVWSAYEKHGXNVFKEXGLHLI 278
           +K++R++AAI S      +    N++ E GL+++
Sbjct: 329 NKESRISAAIDSGYILNNDGKWHNIYSEKGLNIL 362


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/34 (29%), Positives = 21/34 (61%)
 Frame = +3

Query: 177 DKDARVTAAIASNVWSAYEKHGXNVFKEXGLHLI 278
           +K++R++AAI S      +    N++ E GL+++
Sbjct: 329 NKESRISAAIDSGYILNNDGKWHNIYSEKGLNIL 362


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 327 LLLCLYANEAVGFGILKEKIN 389
           L LCL   +A+ FG++ E  N
Sbjct: 181 LALCLAVPQAIQFGVVYENKN 201


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -2

Query: 510 FSNQVKYFSDFSYYFAHNYLKLH 442
           F NQ+++ SD    FA+ +  +H
Sbjct: 467 FENQLQFVSDAVMAFAYAFRDMH 489


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,664
Number of Sequences: 438
Number of extensions: 2616
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)