Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_J20
(596 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 207 3e-53
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 207 3e-53
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 207 3e-53
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 207 3e-53
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 207 3e-53
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 207 3e-53
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 205 1e-52
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 152 1e-36
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 116 5e-26
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 61 3e-09
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 207 bits (505), Expect = 3e-53
Identities = 94/159 (59%), Positives = 112/159 (70%)
Frame = +2
Query: 119 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 298
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 299 AXYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLXRTTTG 478
A Y TG EYNVE +D P AF CYLD GL RTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 479 ARVFGAMXGAVDGGLKCSSFHQKIPXYDAESKKFNAEVH 595
+VFGA+ GAVDGGL ++ P YD+ESK+FNAEVH
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVH 195
Score = 74.1 bits (174), Expect = 3e-13
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +1
Query: 10 MGFVKVVXNKQYFKRYQVKFKRRREGKTDYYARKRL 117
MGFVKVV NK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 207 bits (505), Expect = 3e-53
Identities = 94/159 (59%), Positives = 112/159 (70%)
Frame = +2
Query: 119 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 298
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 299 AXYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLXRTTTG 478
A Y TG EYNVE +D P AF CYLD GL RTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 479 ARVFGAMXGAVDGGLKCSSFHQKIPXYDAESKKFNAEVH 595
+VFGA+ GAVDGGL ++ P YD+ESK+FNAEVH
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVH 195
Score = 74.1 bits (174), Expect = 3e-13
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +1
Query: 10 MGFVKVVXNKQYFKRYQVKFKRRREGKTDYYARKRL 117
MGFVKVV NK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 207 bits (505), Expect = 3e-53
Identities = 94/159 (59%), Positives = 112/159 (70%)
Frame = +2
Query: 119 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 298
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 299 AXYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLXRTTTG 478
A Y TG EYNVE +D P AF CYLD GL RTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 479 ARVFGAMXGAVDGGLKCSSFHQKIPXYDAESKKFNAEVH 595
+VFGA+ GAVDGGL ++ P YD+ESK+FNAEVH
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVH 195
Score = 74.1 bits (174), Expect = 3e-13
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +1
Query: 10 MGFVKVVXNKQYFKRYQVKFKRRREGKTDYYARKRL 117
MGFVKVV NK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 207 bits (505), Expect = 3e-53
Identities = 94/159 (59%), Positives = 112/159 (70%)
Frame = +2
Query: 119 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 298
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 299 AXYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLXRTTTG 478
A Y TG EYNVE +D P AF CYLD GL RTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 479 ARVFGAMXGAVDGGLKCSSFHQKIPXYDAESKKFNAEVH 595
+VFGA+ GAVDGGL ++ P YD+ESK+FNAEVH
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVH 195
Score = 74.1 bits (174), Expect = 3e-13
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +1
Query: 10 MGFVKVVXNKQYFKRYQVKFKRRREGKTDYYARKRL 117
MGFVKVV NK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 207 bits (505), Expect = 3e-53
Identities = 94/159 (59%), Positives = 112/159 (70%)
Frame = +2
Query: 119 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 298
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 299 AXYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLXRTTTG 478
A Y TG EYNVE +D P AF CYLD GL RTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 479 ARVFGAMXGAVDGGLKCSSFHQKIPXYDAESKKFNAEVH 595
+VFGA+ GAVDGGL ++ P YD+ESK+FNAEVH
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVH 195
Score = 74.1 bits (174), Expect = 3e-13
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +1
Query: 10 MGFVKVVXNKQYFKRYQVKFKRRREGKTDYYARKRL 117
MGFVKVV NK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 207 bits (505), Expect = 3e-53
Identities = 94/159 (59%), Positives = 112/159 (70%)
Frame = +2
Query: 119 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 298
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 44 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 103
Query: 299 AXYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLXRTTTG 478
A Y TG EYNVE +D P AF CYLD GL RTTTG
Sbjct: 104 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 163
Query: 479 ARVFGAMXGAVDGGLKCSSFHQKIPXYDAESKKFNAEVH 595
+VFGA+ GAVDGGL ++ P YD+ESK+FNAEVH
Sbjct: 164 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVH 202
Score = 74.1 bits (174), Expect = 3e-13
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +1
Query: 10 MGFVKVVXNKQYFKRYQVKFKRRREGKTDYYARKRL 117
MGFVKVV NK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 8 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 43
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 205 bits (500), Expect = 1e-52
Identities = 93/159 (58%), Positives = 111/159 (69%)
Frame = +2
Query: 119 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 298
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCA Y+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYA 96
Query: 299 AXYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLXRTTTG 478
A Y TG EYNVE +D P AF CYLD GL RTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 479 ARVFGAMXGAVDGGLKCSSFHQKIPXYDAESKKFNAEVH 595
+VFGA+ GAVDGGL ++ P YD+ESK+FNAEVH
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVH 195
Score = 74.1 bits (174), Expect = 3e-13
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +1
Query: 10 MGFVKVVXNKQYFKRYQVKFKRRREGKTDYYARKRL 117
MGFVKVV NK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 152 bits (368), Expect = 1e-36
Identities = 70/121 (57%), Positives = 82/121 (67%)
Frame = +2
Query: 161 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAXYSTGXXXXXXXX 340
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA Y TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 341 XXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLXRTTTGARVFGAMXGAVDGG 520
EYNVE +D P AF CYLD GL RTTTG +VFGA+ GAVDGG
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120
Query: 521 L 523
L
Sbjct: 121 L 121
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 116 bits (280), Expect = 5e-26
Identities = 48/61 (78%), Positives = 59/61 (96%)
Frame = +2
Query: 119 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 298
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 299 A 301
A
Sbjct: 97 A 97
Score = 74.1 bits (174), Expect = 3e-13
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +1
Query: 10 MGFVKVVXNKQYFKRYQVKFKRRREGKTDYYARKRL 117
MGFVKVV NK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 61.3 bits (142), Expect = 3e-09
Identities = 27/43 (62%), Positives = 33/43 (76%)
Frame = +2
Query: 467 TTTGARVFGAMXGAVDGGLKCSSFHQKIPXYDAESKKFNAEVH 595
TTTG +VFGA+ GAVDGGL ++ P YD+ESK+FNAEVH
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVH 43
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,877,915
Number of Sequences: 237096
Number of extensions: 1508814
Number of successful extensions: 2602
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2593
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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