Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_J16
         (399 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061379-1|AAL28927.1| 1180|Drosophila melanogaster LD30316p pro...    31   0.75 
AE014298-1715|AAF48115.2| 1180|Drosophila melanogaster CG1559-PA...    31   0.75 
BT011011-1|AAR27882.1|  339|Drosophila melanogaster AT11434p pro...    27   9.2  
AE013599-3675|AAF47052.1|  339|Drosophila melanogaster CG18128-P...    27   9.2  

>AY061379-1|AAL28927.1| 1180|Drosophila melanogaster LD30316p
           protein.
          Length = 1180

 Score = 30.7 bits (66), Expect = 0.75
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +2

Query: 221 NFDIXSXCAYKAVKLDSPVKFLEQHNKIQIAP*GMELK 334
           N  +   CA     +DSPV FL  HN+I+      ELK
Sbjct: 519 NLKVVRVCAKSREAIDSPVSFLALHNQIRNMETNSELK 556


>AE014298-1715|AAF48115.2| 1180|Drosophila melanogaster CG1559-PA
           protein.
          Length = 1180

 Score = 30.7 bits (66), Expect = 0.75
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +2

Query: 221 NFDIXSXCAYKAVKLDSPVKFLEQHNKIQIAP*GMELK 334
           N  +   CA     +DSPV FL  HN+I+      ELK
Sbjct: 519 NLKVVRVCAKSREAIDSPVSFLALHNQIRNMETNSELK 556


>BT011011-1|AAR27882.1|  339|Drosophila melanogaster AT11434p
           protein.
          Length = 339

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -2

Query: 182 VLPLIASFHXCQAHRISTCSFRV 114
           ++ L+ SFH C  + ++TC+  V
Sbjct: 116 IIALVHSFHSCDGYNLATCALPV 138


>AE013599-3675|AAF47052.1|  339|Drosophila melanogaster CG18128-PA
           protein.
          Length = 339

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -2

Query: 182 VLPLIASFHXCQAHRISTCSFRV 114
           ++ L+ SFH C  + ++TC+  V
Sbjct: 116 IIALVHSFHSCDGYNLATCALPV 138


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,888,374
Number of Sequences: 53049
Number of extensions: 291228
Number of successful extensions: 584
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 584
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)