Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_I17
(583 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0160 + 1302366-1302731,1303318-1303364,1303455-1303800 38 0.004
05_01_0112 - 757514-758444,758525-758571,759074-759236,759861-76... 37 0.010
07_01_0413 - 3155080-3155274,3155628-3155933,3156062-3156163,315... 32 0.29
02_01_0500 - 3623837-3624019,3624591-3624778,3625209-3626147,362... 31 0.51
11_02_0073 - 8020401-8020512,8020594-8020679,8020761-8020921,802... 31 0.89
05_01_0290 + 2270749-2271037,2272227-2272363,2272660-2272805,227... 31 0.89
04_04_0674 + 27173948-27174188,27174704-27175260,27175310-271753... 31 0.89
10_01_0298 - 3094197-3094307,3095093-3095253,3095462-3095666,309... 30 1.5
11_01_0489 + 3776563-3776692,3776995-3777073,3777532-3777840,377... 29 2.7
07_01_0577 - 4286048-4286186,4286600-4286660,4286957-4287089,428... 29 2.7
10_01_0076 - 987092-987671,987747-987812,988201-988363,988467-98... 29 3.6
08_01_0533 + 4625376-4625709,4625799-4625966,4627428-4627689,462... 28 6.2
>03_01_0160 + 1302366-1302731,1303318-1303364,1303455-1303800
Length = 252
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +2
Query: 158 IIQGDINRIFPDLSIKNVRLVMDKETDKFKGFCYVXFEYLEXLMKA 295
+ + D+ F L I ++R ++K T +GFC+V FE E L KA
Sbjct: 184 VTETDLRDFFKSLKISSIRFAINKRTGDSRGFCHVDFEDDESLEKA 229
>05_01_0112 -
757514-758444,758525-758571,759074-759236,759861-760366
Length = 548
Score = 37.1 bits (82), Expect = 0.010
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 158 IIQGDINRIFPDLSIKNVRLVMDKETDKFKGFCYVXF 268
I + D+ + F D I ++R DKET FKG+ +V F
Sbjct: 278 ITEDDLKKFFSDCKISSIRFGTDKETGDFKGYVHVDF 314
>07_01_0413 -
3155080-3155274,3155628-3155933,3156062-3156163,
3156262-3156705
Length = 348
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 149 PPAIIQGDINRIFPDLS-IKNVRLVMDKETDKFKGFCYV 262
P + G+I++ F + + NV+++ DK TD+ +GF +V
Sbjct: 126 PYTMTSGEISQTFSEAGRVDNVQIIYDKVTDRSRGFAFV 164
>02_01_0500 -
3623837-3624019,3624591-3624778,3625209-3626147,
3626311-3626479,3626701-3626871,3626948-3627016,
3627094-3627201,3627844-3627997,3628659-3628738,
3628822-3628914,3628951-3629073,3629165-3629915,
3630123-3630163,3630338-3630385
Length = 1038
Score = 31.5 bits (68), Expect = 0.51
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 200 IKNVRLVMDKETDKFKGFCYVXFEYLEXLMKA 295
IK++RLV DK T +GF ++ F +E KA
Sbjct: 465 IKDIRLVRDKFTHVSRGFAFIHFHSVEEATKA 496
>11_02_0073 -
8020401-8020512,8020594-8020679,8020761-8020921,
8021196-8021400,8021664-8021697,8022352-8022422,
8023363-8023542,8023625-8023765,8023859-8023975,
8024074-8024469
Length = 500
Score = 30.7 bits (66), Expect = 0.89
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +2
Query: 200 IKNVRLVMDKETDKFKGFCYVXFEYLEXLMKA 295
I VRL+ DKET + KGF +V F E +A
Sbjct: 130 IYEVRLMKDKETKENKGFAFVNFTAKEAAQRA 161
>05_01_0290 +
2270749-2271037,2272227-2272363,2272660-2272805,
2272853-2272877
Length = 198
Score = 30.7 bits (66), Expect = 0.89
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 164 QGDINRIFPDLS-IKNVRLVMDKETDKFKGFCYVXFEYLEXLMKA 295
+ D++ IF D +KN+ L +D+ T KG+ + +E E A
Sbjct: 114 EDDLHNIFRDFGQVKNLHLNLDRRTGFVKGYALIEYETFEEAQAA 158
>04_04_0674 +
27173948-27174188,27174704-27175260,27175310-27175399,
27175475-27175714,27175801-27176022,27176124-27176433,
27176528-27176847,27176906-27177021,27177133-27177227,
27177331-27177407,27177520-27177615
Length = 787
Score = 30.7 bits (66), Expect = 0.89
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +2
Query: 164 QGDINRIFPDLS-IKNVRLVMDKETDKFKGFCYVXFEYLEXLMKA 295
+ D+ ++F ++ I VRL+M+ T K KGF ++ + +E +A
Sbjct: 203 ESDLRKVFGEVGEITEVRLMMNPVTKKNKGFAFLRYATVEQARRA 247
>10_01_0298 -
3094197-3094307,3095093-3095253,3095462-3095666,
3096349-3096534,3096616-3096756,3096843-3096959,
3097046-3097456
Length = 443
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +2
Query: 200 IKNVRLVMDKETDKFKGFCYVXF 268
I VRL+ DKET + KGF +V F
Sbjct: 135 ISEVRLMKDKETKENKGFAFVTF 157
>11_01_0489 +
3776563-3776692,3776995-3777073,3777532-3777840,
3778828-3778898,3778975-3779213,3779306-3779383,
3779734-3780156,3780416-3780661,3780886-3780978,
3781480-3781527
Length = 571
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +2
Query: 200 IKNVRLVMDKETDKFKGFCYVXFEYLEXLMKAXXXXXXXXXXXXXXXXDVAEEKRN 367
+ + RLV+DKET K KG+ + ++ E + A D AE RN
Sbjct: 66 VVSFRLVIDKETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENGRN 121
>07_01_0577 -
4286048-4286186,4286600-4286660,4286957-4287089,
4287286-4287350,4288346-4288451,4288529-4288750,
4289619-4289852,4289948-4290037,4290605-4291507
Length = 650
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 164 QGDINRIFPDLS-IKNVRLVMDKETDKFKGFCYVXFEYLEXLMKA 295
+ D+ +F I VR++M+ K KG+C+V + + KA
Sbjct: 249 EDDVRAVFAKAGEITEVRMIMNPLAGKNKGYCFVRYRHAAQAKKA 293
>10_01_0076 -
987092-987671,987747-987812,988201-988363,988467-988548,
989153-989202,989237-989270,990177-990239,990339-990403,
990485-990560,991274-991353,991514-991628,991729-991830
Length = 491
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 209 VRLVMDKETDKFKGFCYVXFEYLEXLMKA 295
VRLV DKET+K +G+ ++ + + + A
Sbjct: 196 VRLVTDKETNKPRGYAFIEYMHTRDMKNA 224
>08_01_0533 +
4625376-4625709,4625799-4625966,4627428-4627689,
4627787-4627934,4628453-4628496,4628812-4628859,
4629245-4630509,4630741-4630839,4630916-4631097,
4631186-4631246,4631488-4631725,4631818-4631971,
4632042-4632335
Length = 1098
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -2
Query: 246 LNLSVSLSITNLTFFIDRSGKILFIS 169
L +S S S T++ F +D SGK+ F+S
Sbjct: 37 LMISTSYSSTSVRFVLDSSGKVQFLS 62
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,972,691
Number of Sequences: 37544
Number of extensions: 140034
Number of successful extensions: 450
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 450
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1364465340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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