Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_I17
(583 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 34 0.085
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 31 0.79
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 31 0.79
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 30 1.4
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z81575-8|CAB04634.1| 433|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z70308-9|CAA94346.2| 402|Caenorhabditis elegans Hypothetical pr... 28 4.2
AF038618-2|AAB92072.1| 487|Caenorhabditis elegans Hypothetical ... 27 9.7
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 33.9 bits (74), Expect = 0.085
Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +2
Query: 155 AIIQGDINRIFPDLS-IKNVRLVMDKETDKFKGFCYVXFE 271
A+ +GD+ +F + N+ L+ DK+T K KGF ++ ++
Sbjct: 48 ALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYK 87
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 30.7 bits (66), Expect = 0.79
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +2
Query: 185 FPDLSIK--NVRLVMDKETDKFKGFCYVXFE 271
F D +K ++ LV D+++ FKGF YV FE
Sbjct: 31 FTDEELKKFDIHLVHDRDSGSFKGFAYVTFE 61
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 30.7 bits (66), Expect = 0.79
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 164 QGDINRIFPDL-SIKNVRLVMDKETDKFKGFCYVXF 268
+ D+ F ++ NVR+V D+ET + +GF +V F
Sbjct: 17 EDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEF 52
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 30.3 bits (65), Expect = 1.0
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 200 IKNVRLVMDKETDKFKGFCYVXFE 271
++ VR+V DK+T K KGF +V F+
Sbjct: 273 VEAVRIVRDKDTGKGKGFAFVNFK 296
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 200 IKNVRLVMDKETDKFKGFCYVXF 268
I NVR+V D+ET + +GF ++ F
Sbjct: 31 INNVRIVCDRETGRPRGFAFIEF 53
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 200 IKNVRLVMDKETDKFKGFCYVXF 268
+ NVR+V D+ET + +GF +V F
Sbjct: 32 VNNVRIVYDRETGRPRGFAFVEF 54
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/52 (23%), Positives = 28/52 (53%)
Frame = +2
Query: 125 IRRTLEICPPAIIQGDINRIFPDLSIKNVRLVMDKETDKFKGFCYVXFEYLE 280
++R + + PA+ + D+ + +S+K + + +T+ K + FE+LE
Sbjct: 2305 VKREISVGKPALPKADVQKTLETVSLKRIDSQTEPKTESIKQRRHPIFEHLE 2356
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 128 RRTLEICPPAIIQGDINRIFPDLS-IKNVRLVMDKETDKFKGFCYVXFEYLEXLMKA 295
R L P A + D+ +F + V++V+DK+T KGF V F + E + A
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAA 336
>Z81575-8|CAB04634.1| 433|Caenorhabditis elegans Hypothetical
protein R08H2.9 protein.
Length = 433
Score = 29.1 bits (62), Expect = 2.4
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 203 KNVRLVMDKETDKFKGFCYVXFEYLEXLMK 292
K ++L++ K+ D G C + F+YL L +
Sbjct: 166 KPIKLILKKKADAISGSCEIDFDYLMELQR 195
>Z70308-9|CAA94346.2| 402|Caenorhabditis elegans Hypothetical
protein F49E11.7 protein.
Length = 402
Score = 28.3 bits (60), Expect = 4.2
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +2
Query: 116 SLHIRRTL-EICPPAIIQGDINRIFPDL--SIKNVRLVMDKETDKFKGFCYVXFEYL 277
+L + TL +I PP I GDI+ +PDL + N D + GFC F +L
Sbjct: 64 ALSVDDTLAKISPPVTIVGDIHGQYPDLVRVLCNQNSKEDAKKKAAYGFCNSRFVFL 120
>AF038618-2|AAB92072.1| 487|Caenorhabditis elegans Hypothetical
protein F42G8.8 protein.
Length = 487
Score = 27.1 bits (57), Expect = 9.7
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +2
Query: 140 EICPPAIIQGDINRIFPDL-SIKNVRLVMDKETDKF-KGFCYVXFEYL 277
+I PP I GDI+ F DL I N + D K GFC F +L
Sbjct: 54 QISPPVTIVGDIHGQFHDLIRILNYNVPKDDAKKKSGYGFCNNRFVFL 101
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,315,862
Number of Sequences: 27780
Number of extensions: 121381
Number of successful extensions: 344
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 344
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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