Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_I10
(542 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0119 - 951492-951679,951780-951918,952023-952095,952196-95... 198 2e-51
08_01_0120 - 957365-957552,957642-957780,957847-957970,958398-95... 184 4e-47
07_03_0978 + 23099690-23100108,23100530-23100564,23100868-231009... 178 2e-45
02_05_0301 - 27687297-27687547,27687637-27687775,27689150-27689416 144 5e-35
07_03_1281 - 25439634-25439750,25439868-25440071,25440328-254404... 29 2.4
04_04_1209 + 31755637-31755821,31756017-31756165,31756703-317568... 29 2.4
06_03_0742 + 24027506-24027721,24028835-24029004,24029893-240300... 27 7.3
06_03_1379 - 29709532-29709843,29709951-29710112,29710193-297110... 27 9.7
04_03_0273 - 13742351-13743357,13743617-13743731 27 9.7
>08_01_0119 -
951492-951679,951780-951918,952023-952095,952196-952218
Length = 140
Score = 198 bits (484), Expect = 2e-51
Identities = 92/127 (72%), Positives = 106/127 (83%)
Frame = +3
Query: 108 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 287
SA+PY+R+ P+W+K A DV+E I K KKG PSQIGV+LRD HG+ V+ VTG KILR
Sbjct: 14 SAIPYKRTPPSWVKTAAADVEEMIMKAAKKGQMPSQIGVVLRDQHGIPLVKSVTGSKILR 73
Query: 288 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTXS 467
I+KA GLAP++PEDLY+LIKKAVA+RKHLERNRKDKDSKFRLILVESRIHRLARYYK
Sbjct: 74 ILKAHGLAPEIPEDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTK 133
Query: 468 VLPPNWK 488
LPP WK
Sbjct: 134 KLPPTWK 140
>08_01_0120 -
957365-957552,957642-957780,957847-957970,958398-958486
Length = 179
Score = 184 bits (448), Expect = 4e-47
Identities = 94/144 (65%), Positives = 106/144 (73%), Gaps = 17/144 (11%)
Frame = +3
Query: 108 SALPYRRSVPTWLKLTADDV-----------------KEQIYKLGKKGLTPSQIGVMLRD 236
SALPY+R+ P+WLK A DV +E I K KKG PSQIGV+LRD
Sbjct: 36 SALPYKRTPPSWLKTAASDVGAFSFLSLSRLALFHLVEEMIMKAAKKGQMPSQIGVVLRD 95
Query: 237 SHGVAQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLI 416
HG+ V+ VTG KILRI+KA GLAP++PEDLY+LIKKAVA+RKHLERNRKDKDSKFRLI
Sbjct: 96 QHGIPLVKSVTGSKILRILKAHGLAPEIPEDLYFLIKKAVAIRKHLERNRKDKDSKFRLI 155
Query: 417 LVESRIHRLARYYKTXSVLPPNWK 488
LVESRIHRLARYYK LPP WK
Sbjct: 156 LVESRIHRLARYYKRTKKLPPTWK 179
>07_03_0978 +
23099690-23100108,23100530-23100564,23100868-23100926,
23101269-23101310,23102003-23102065,23102172-23102253,
23102570-23102609,23102657-23102753
Length = 278
Score = 178 bits (434), Expect = 2e-45
Identities = 81/127 (63%), Positives = 102/127 (80%)
Frame = +3
Query: 108 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 287
S LPYRR+ P W+K +A +V+E I ++ KKG PSQIG +LRD+H V + VTG KILR
Sbjct: 14 SVLPYRRAAPAWVKTSASEVEEMIVRVAKKGQLPSQIGAILRDAHAVPLAQGVTGGKILR 73
Query: 288 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTXS 467
++K+ GLAP++PEDLY+LIKKAVAMRKHLERNRKDKD+KFRLILVESR+HRL RYY+
Sbjct: 74 VLKSRGLAPEVPEDLYFLIKKAVAMRKHLERNRKDKDTKFRLILVESRVHRLTRYYRLAK 133
Query: 468 VLPPNWK 488
+P +K
Sbjct: 134 KIPAFFK 140
>02_05_0301 - 27687297-27687547,27687637-27687775,27689150-27689416
Length = 218
Score = 144 bits (348), Expect = 5e-35
Identities = 70/106 (66%), Positives = 80/106 (75%)
Frame = +3
Query: 162 DVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRIMKAMGLAPDLPEDLYYL 341
+V+E I K K G SQIGV+LR HG+ V+ + KIL I+KA GLAP + EDLY+L
Sbjct: 89 EVEEMIMKAAKMGQMSSQIGVVLRHQHGIPLVKSIASSKILHILKAHGLAPKILEDLYFL 148
Query: 342 IKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTXSVLPP 479
IKKAVA+RKHLERNRKDKDS FRLILVESRIHRL RYYK LPP
Sbjct: 149 IKKAVAIRKHLERNRKDKDSSFRLILVESRIHRLVRYYKRTKKLPP 194
>07_03_1281 -
25439634-25439750,25439868-25440071,25440328-25440402,
25440477-25440631,25440704-25440824,25440946-25441020,
25441216-25441353,25441617-25441727,25441883-25441987,
25442061-25442139,25442488-25442549,25442634-25442699,
25442812-25442907,25443353-25443403,25443629-25443709
Length = 511
Score = 29.1 bits (62), Expect = 2.4
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Frame = +3
Query: 108 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTG-KKIL 284
S +PY T L D++K+Q+ + KG+T + V++ + QV KKI+
Sbjct: 216 SLVPYFLDEETGWGLEVDELKKQLEEAQSKGITVRAL-VVINPGNPTGQVLAEENQKKIV 274
Query: 285 RIMKAMG---LAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 428
K G LA ++ ++ Y+ K K + R+ D L+ +S
Sbjct: 275 EFCKNEGLVLLADEVYQENIYVEDKKFHSFKKIARSMGYTDDDLPLVSFQS 325
>04_04_1209 +
31755637-31755821,31756017-31756165,31756703-31756845,
31756902-31757024
Length = 199
Score = 29.1 bits (62), Expect = 2.4
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Frame = +3
Query: 276 KILRIMKAMGL-APD--LPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVE----SRI 434
KI R+++A+ A D LP +L ++ AV MR R+RK+KD++ ++++E R
Sbjct: 105 KITRVLRAVHTGAHDRRLPGNLDKTVRVAV-MRPKTSRSRKEKDAEEEVLVIEGIERERE 163
Query: 435 HRLARY 452
HR Y
Sbjct: 164 HRGGEY 169
>06_03_0742 +
24027506-24027721,24028835-24029004,24029893-24030052,
24030162-24030455,24031490-24031717,24031827-24032006,
24032079-24032238,24032591-24032617,24033426-24033613,
24034269-24034532,24035123-24035218,24035311-24035399,
24035473-24035620,24035842-24036051,24036141-24036440,
24037906-24038248,24038747-24038952,24039071-24039273,
24040021-24040117,24040148-24040222,24040328-24040602,
24041116-24041256,24041469-24042339,24042481-24042520,
24042605-24043050
Length = 1808
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 123 RRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRD 236
RRS +++ D +KE + GKK L +++ +L+D
Sbjct: 326 RRSTNETRRISDDTIKEMVASSGKKHLLTTEVESILKD 363
>06_03_1379 -
29709532-29709843,29709951-29710112,29710193-29711086,
29712741-29712812,29714106-29714210,29714820-29714900
Length = 541
Score = 27.1 bits (57), Expect = 9.7
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 315 DLPEDLYYLIKK-AVAMRKHLERNRKDKDSKFRL 413
DLPE L++ AVA R LE++R D+ FR+
Sbjct: 24 DLPEQQPQLMENVAVAKRSRLEQHRTLSDNSFRV 57
>04_03_0273 - 13742351-13743357,13743617-13743731
Length = 373
Score = 27.1 bits (57), Expect = 9.7
Identities = 21/81 (25%), Positives = 34/81 (41%)
Frame = +3
Query: 27 CRCQIGDLVKSRKHGSYARSWLRVSPXSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLT 206
CRC ++H + WLR +P S Y + T L + +E I +LG +
Sbjct: 35 CRCMCKKTTTEKRHMYISDEWLRANP-SVTAY---MSTSLNVRQQVAEEGIPRLGAEAAC 90
Query: 207 PSQIGVMLRDSHGVAQVRFVT 269
+ IG + + + V F T
Sbjct: 91 -NAIGNWGKPASSITHVVFAT 110
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,012,045
Number of Sequences: 37544
Number of extensions: 247942
Number of successful extensions: 632
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 632
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1210221432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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