Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_I06
         (456 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p...    27   8.6  
Z35663-1|CAA84725.1|  324|Caenorhabditis elegans Hypothetical pr...    27   8.6  
U42833-2|AAA83576.1| 1276|Caenorhabditis elegans Hypothetical pr...    27   8.6  
AY733040-1|AAW57534.1| 1425|Caenorhabditis elegans death-associa...    27   8.6  
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.      27   8.6  
AF043701-1|AAK18971.2| 1425|Caenorhabditis elegans Dap (death-as...    27   8.6  

>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical protein
            C35C5.1 protein.
          Length = 2962

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +3

Query: 33   TQLVYRHRNMYFKTLSKTDAHFVVCDVTKMKNVASNLQTMV 155
            T++V+R ++         DA+F  C VT + N+ + L +MV
Sbjct: 2793 TRVVFRSKSCMRPNEKAGDANFKTCKVTLLVNLETALLSMV 2833


>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
            protein C35C5.1 protein.
          Length = 2962

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +3

Query: 33   TQLVYRHRNMYFKTLSKTDAHFVVCDVTKMKNVASNLQTMV 155
            T++V+R ++         DA+F  C VT + N+ + L +MV
Sbjct: 2793 TRVVFRSKSCMRPNEKAGDANFKTCKVTLLVNLETALLSMV 2833


>Z35663-1|CAA84725.1|  324|Caenorhabditis elegans Hypothetical
           protein T04A8.1 protein.
          Length = 324

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = -3

Query: 127 FFIFVTSHTTK*ASVLLNVLKYIF 56
           +F+F  ++T K  SVLL ++ ++F
Sbjct: 261 YFVFFAAYTPKIRSVLLQIVSFVF 284


>U42833-2|AAA83576.1| 1276|Caenorhabditis elegans Hypothetical
           protein ZK430.5 protein.
          Length = 1276

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +2

Query: 284 CVTNICIIYMANVSFDVVTYYCSLCLVSN 370
           C  NIC+IY ++ SF    Y  S  + SN
Sbjct: 469 CTCNICVIYHSSSSF-ATEYMMSFMIYSN 496


>AY733040-1|AAW57534.1| 1425|Caenorhabditis elegans death-associated
           protein kinase protein.
          Length = 1425

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
 Frame = +3

Query: 3   NNRLE*MYNITQLVYRHRNMYFKTLSKTDAHFV----VCDVTKMKNVASNLQ 146
           +NR E   NIT++ Y   + YFK  SK    F+    V DV +   V   LQ
Sbjct: 234 DNRDETFSNITRVRYHFSDRYFKNTSKHAKDFIYRLFVRDVDQRATVEECLQ 285


>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
          Length = 2962

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +3

Query: 33   TQLVYRHRNMYFKTLSKTDAHFVVCDVTKMKNVASNLQTMV 155
            T++V+R ++         DA+F  C VT + N+ + L +MV
Sbjct: 2793 TRVVFRSKSCMRPNEKAGDANFKTCKVTLLVNLETALLSMV 2833


>AF043701-1|AAK18971.2| 1425|Caenorhabditis elegans Dap
           (death-associated protein)kinase homolog protein 1
           protein.
          Length = 1425

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
 Frame = +3

Query: 3   NNRLE*MYNITQLVYRHRNMYFKTLSKTDAHFV----VCDVTKMKNVASNLQ 146
           +NR E   NIT++ Y   + YFK  SK    F+    V DV +   V   LQ
Sbjct: 234 DNRDETFSNITRVRYHFSDRYFKNTSKHAKDFIYRLFVRDVDQRATVEECLQ 285


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,024,642
Number of Sequences: 27780
Number of extensions: 125609
Number of successful extensions: 284
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 284
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)