Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_I04
(651 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71; Eukaryo... 304 1e-81
UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellul... 282 4e-75
UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep: ... 221 1e-56
UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeb... 167 3e-40
UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3; Euka... 151 1e-35
UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6; Thermop... 124 2e-27
UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella... 119 7e-26
UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17; Euryar... 117 3e-25
UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3; Archaea... 114 2e-24
UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12; Archae... 111 1e-23
UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma j... 107 2e-22
UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10; Archae... 105 1e-21
UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1; Encephal... 98 1e-19
UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1; ... 95 1e-18
UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1; Nanoarc... 95 2e-18
UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus N... 94 3e-18
UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2; Crenarchaeot... 87 3e-16
UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4; Thermop... 84 2e-15
UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90; Bacteri... 80 5e-14
UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8 ... 77 5e-13
UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular... 75 1e-12
UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2; n... 74 3e-12
UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and org... 73 5e-12
UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellul... 71 2e-11
UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellul... 67 3e-10
UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17; Bacteri... 66 7e-10
UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;... 59 1e-07
UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus ... 58 2e-07
UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellul... 58 2e-07
UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5; Tracheophyta... 57 3e-07
UniRef50_A3LNH9 Cluster: Predicted protein; n=5; Saccharomycetac... 57 4e-07
UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome. prec... 57 4e-07
UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular org... 55 2e-06
UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1; ... 54 4e-06
UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep... 53 5e-06
UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep... 52 1e-05
UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;... 52 1e-05
UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2; Streptophyti... 52 2e-05
UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis ... 50 6e-05
UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1; ... 48 1e-04
UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondri... 48 1e-04
UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6; Eurotiom... 48 3e-04
UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-P... 47 5e-04
UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;... 46 6e-04
UniRef50_Q5IX18 Cluster: 50S ribosomal protein L2; n=1; Protothe... 46 8e-04
UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondri... 45 0.002
UniRef50_A7CUV2 Cluster: Ribosomal protein L2; n=1; Opitutaceae ... 44 0.004
UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma g... 44 0.004
UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10; Magnoli... 43 0.006
UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE454... 43 0.006
UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264, ... 43 0.007
UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome s... 41 0.022
UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole gen... 41 0.030
UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2, mitoch... 40 0.039
UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288, w... 40 0.039
UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial... 40 0.052
UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus C... 40 0.068
UniRef50_Q9G8Q6 Cluster: Ribosomal protein L2; n=1; Naegleria gr... 39 0.090
UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1; ... 39 0.090
UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma j... 39 0.12
UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2; Fi... 39 0.12
UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas d... 38 0.21
UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3; Dictyostelii... 37 0.48
UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria tene... 36 0.64
UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2; ... 36 0.64
UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1; ... 34 2.6
UniRef50_Q9UTS5 Cluster: Zinc finger protein zas1; n=3; Schizosa... 34 2.6
UniRef50_Q8TVX9 Cluster: Predicted DNA methylase containing a Zn... 33 5.9
UniRef50_UPI00015564C7 Cluster: PREDICTED: similar to gene of un... 33 7.8
UniRef50_UPI0000D55437 Cluster: PREDICTED: similar to leprecan 1... 33 7.8
UniRef50_UPI000065ED52 Cluster: Complement C5 precursor [Contain... 33 7.8
UniRef50_A5GJQ8 Cluster: 6-pyruvoyl tetrahydropterin synthase; n... 33 7.8
>UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71;
Eukaryota|Rep: 60S ribosomal protein L8 - Drosophila
melanogaster (Fruit fly)
Length = 256
Score = 304 bits (746), Expect = 1e-81
Identities = 139/171 (81%), Positives = 155/171 (90%)
Frame = +1
Query: 46 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLHYAERHGYIKGVVKDIIHDPGRGAPLAV 225
MGRVIRAQRKGAGSVF +H KKRKGA KLRSL +AER GYI+GVVKDIIHDPGRGAPLAV
Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60
Query: 226 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKM 405
VHFRDPY++K RKELFIAPEG++TGQFVYCG+KATL++GNVMP+ MPEGTI+CNLE K
Sbjct: 61 VHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKT 120
Query: 406 GDRGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAG 558
GDRGRLAR SGN+ATVI HN D K+T VKLPSGAKKV+PS+NR MVGIVAG
Sbjct: 121 GDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAG 171
Score = 66.5 bits (155), Expect = 5e-10
Identities = 30/41 (73%), Positives = 32/41 (78%)
Frame = +2
Query: 527 ATEAWSVLLLEGGRIDKPILKAGRAYHKYKVKRNCWPYVRG 649
A A ++ GGRIDKPILKAGRAYHKYKVKRN WP VRG
Sbjct: 161 ANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNSWPKVRG 201
>UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellular
organisms|Rep: 60S ribosomal protein L8 - Homo sapiens
(Human)
Length = 257
Score = 282 bits (692), Expect = 4e-75
Identities = 129/171 (75%), Positives = 149/171 (87%)
Frame = +1
Query: 46 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLHYAERHGYIKGVVKDIIHDPGRGAPLAV 225
MGRVIR QRKGAGSVF +H K RKGA +LR++ +AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 226 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKM 405
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LE K
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 406 GDRGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAG 558
GDRG+LARASGN+ATVI HNP+ K+T VKLPSG+KKV+ S+NR +VG+VAG
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAG 171
Score = 68.1 bits (159), Expect = 2e-10
Identities = 28/30 (93%), Positives = 28/30 (93%)
Frame = +2
Query: 560 GGRIDKPILKAGRAYHKYKVKRNCWPYVRG 649
GGRIDKPILKAGRAYHKYK KRNCWP VRG
Sbjct: 172 GGRIDKPILKAGRAYHKYKAKRNCWPRVRG 201
>UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep:
Ribosomal protein - Codakia orbicularis
Length = 234
Score = 221 bits (540), Expect = 1e-56
Identities = 109/171 (63%), Positives = 129/171 (75%)
Frame = +1
Query: 46 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLHYAERHGYIKGVVKDIIHDPGRGAPLAV 225
MGRVIR+QRKG GSVF +HTK RKG LR++ +AERHGY+KGVVKDI+HDPGRGAPLA
Sbjct: 1 MGRVIRSQRKGPGSVFKAHTKHRKGKAALRAVDFAERHGYVKGVVKDIVHDPGRGAPLAK 60
Query: 226 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKM 405
V FRDPYK+K R E FIA EG+YTGQF+YCGKKA L++
Sbjct: 61 VTFRDPYKYKMRTETFIATEGMYTGQFIYCGKKANLQI---------------------- 98
Query: 406 GDRGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAG 558
RG+LARASGN+ATVI HNPD K++ VKLPSG+KKV+PS+NR +VGIVAG
Sbjct: 99 --RGKLARASGNYATVISHNPDTKKSRVKLPSGSKKVIPSANRAIVGIVAG 147
Score = 66.9 bits (156), Expect = 4e-10
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = +2
Query: 560 GGRIDKPILKAGRAYHKYKVKRNCWPYVRG 649
GGRIDKP+LKAGRAYHKYK KRNCWP VRG
Sbjct: 148 GGRIDKPMLKAGRAYHKYKAKRNCWPKVRG 177
>UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeba
histolytica|Rep: 60S ribosomal protein L8 - Entamoeba
histolytica
Length = 158
Score = 167 bits (405), Expect = 3e-40
Identities = 73/114 (64%), Positives = 92/114 (80%)
Frame = +1
Query: 169 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNV 348
+G+VK I HDPGRGAPLA V FR+P ++ KELFI EGLY+GQ++YCG KA+L +GNV
Sbjct: 33 RGLVKSIEHDPGRGAPLARVVFRNPRQYGLDKELFICAEGLYSGQYIYCGSKASLHIGNV 92
Query: 349 MPVGAMPEGTIVCNLEXKMGDRGRLARASGNFATVIGHNPDAKRTXVKLPSGAK 510
+P+G PEGT+VCN+E K GDRG +ARASGN+ATVI HN D + T ++LPSGAK
Sbjct: 93 LPIGQCPEGTVVCNVESKPGDRGIIARASGNYATVISHNADNETTRIRLPSGAK 146
>UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3;
Eukaryota|Rep: 60S ribosomal protein KD4/L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 123
Score = 151 bits (367), Expect = 1e-35
Identities = 74/123 (60%), Positives = 88/123 (71%)
Frame = +1
Query: 46 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLHYAERHGYIKGVVKDIIHDPGRGAPLAV 225
MGRVIRAQRK AGSVF SHT RKG K RSL + ER+GY+KGVV +IIHDPGRGAPLA
Sbjct: 1 MGRVIRAQRKVAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
Query: 226 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKM 405
V FR P++FK +KELF+ E +YCGKKATL VGNV+P+ ++PEG +
Sbjct: 61 VTFRHPFRFKKQKELFVXXEVCTPVSSLYCGKKATLVVGNVLPLRSIPEGAXCLQRRDHV 120
Query: 406 GDR 414
G R
Sbjct: 121 GYR 123
>UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6;
Thermoproteales|Rep: 50S ribosomal protein L2P -
Pyrobaculum aerophilum
Length = 246
Score = 124 bits (298), Expect = 2e-27
Identities = 72/172 (41%), Positives = 98/172 (56%), Gaps = 1/172 (0%)
Frame = +1
Query: 46 MGRVIRAQRKG-AGSVFVSHTKKRKGAPKLRSLHYAERHGYIKGVVKDIIHDPGRGAPLA 222
MG+ I QR+G GS F S + KR G + L GY V DI+H+PG AP+A
Sbjct: 1 MGKRILVQRRGRGGSQFRSPSWKRDGPVRYPPLGVISGKGY----VVDILHEPGLNAPVA 56
Query: 223 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXK 402
+ + +F A EGLY GQ V GK A+ + GN+M +G +PEGT++ N+E +
Sbjct: 57 KIVTENGVEFFN-----YAAEGLYVGQVVEIGKGASPKTGNIMILGEIPEGTMIFNVEKR 111
Query: 403 MGDRGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAG 558
GD G+ ARA G +A VIG P+ +T ++LPSG + S R VGIVAG
Sbjct: 112 AGDGGKFARAGGTYAVVIGQKPEENKTIIRLPSGRTVEVDSRGRATVGIVAG 163
Score = 40.7 bits (91), Expect = 0.030
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +2
Query: 560 GGRIDKPILKAGRAYHKYKVKRNCWPYVRG 649
GGRI+KP LKAG+ YH+ + K +P VRG
Sbjct: 164 GGRIEKPFLKAGKKYHRARAKAWKYPTVRG 193
>UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella
natans|Rep: Ribosomal protein L8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 281
Score = 119 bits (286), Expect = 7e-26
Identities = 65/175 (37%), Positives = 94/175 (53%)
Frame = +1
Query: 46 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLHYAERHGYIKGVVKDIIHDPGRGAPLAV 225
MG++I AQRKG + +R G +S+ E++ IKG++ D + P
Sbjct: 27 MGKIISAQRKGKIGFQKQGSSRRIGKISYKSMTNEEKYSVIKGIISKFHIDTVKKVPAIK 86
Query: 226 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKM 405
+ F FK EL+IA E LY + + CG +A GNV+P+ +P G VCN+E K
Sbjct: 87 IKFNVTKYFKNYYELYIAVEKLYLNKTIACGLQARPITGNVLPLFNIPNGVFVCNVEEKE 146
Query: 406 GDRGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAGRWTY 570
GD G+LAR++G F V+ H+ T +KLPS K+L S R +G+VAG Y
Sbjct: 147 GDGGKLARSAGAFVGVLSHSKYNNVTKLKLPSKKIKILSSFCRATIGVVAGGGKY 201
Score = 35.1 bits (77), Expect = 1.5
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +2
Query: 560 GGRIDKPILKAGRAYHKYKVKRNCWPYVR 646
GG+ +KP+LKAG+ Y+K+K +P V+
Sbjct: 198 GGKYEKPLLKAGKNYYKFKSLNKKYPIVK 226
>UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17;
Euryarchaeota|Rep: 50S ribosomal protein L2P -
Methanopyrus kandleri
Length = 243
Score = 117 bits (281), Expect = 3e-25
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 1/172 (0%)
Frame = +1
Query: 46 MGRVIRAQRKGAGS-VFVSHTKKRKGAPKLRSLHYAERHGYIKGVVKDIIHDPGRGAPLA 222
MG+ IR QR G G + + + + +G + R E+ G + G V +++HDP R AP+A
Sbjct: 1 MGKRIRPQRLGRGGPTYRAPSHRYRGRIEHRPYDEQEKKGKVVGKVVELLHDPARNAPVA 60
Query: 223 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXK 402
V F D + L + PEG G + CG A ++ GN +P+ +PEG + N+E +
Sbjct: 61 RVRFEDG-----EERLILVPEGTKVGDIIECGVSAEIKPGNTLPLAEIPEGVPIFNIEGQ 115
Query: 403 MGDRGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAG 558
GD G+ ARA G +AT+I H D RT V+LPSG + R +G+++G
Sbjct: 116 PGDGGKFARAPGCYATIIAH--DVGRTYVQLPSGKVRTFDPRCRATIGVMSG 165
Score = 36.3 bits (80), Expect = 0.64
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 560 GGRIDKPILKAGRAYHKYKVKRNCWPYVRG 649
GG+ +KP +KAG+ Y+ + K WP VRG
Sbjct: 166 GGKREKPFVKAGKKYYHMRSKGGKWPKVRG 195
>UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3;
Archaea|Rep: 50S ribosomal protein L2P - Aeropyrum
pernix
Length = 238
Score = 114 bits (274), Expect = 2e-24
Identities = 68/172 (39%), Positives = 97/172 (56%), Gaps = 1/172 (0%)
Frame = +1
Query: 46 MGRVIRAQRKGAGS-VFVSHTKKRKGAPKLRSLHYAERHGYIKGVVKDIIHDPGRGAPLA 222
MG+ +R QR G G+ + S G K L ++G V ++IHDPGR PLA
Sbjct: 1 MGKRLRQQRAGRGTPTYRSRAHIHPGPAKYPPLS----GDTLRGKVVELIHDPGRYVPLA 56
Query: 223 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXK 402
V D +F L A EG+Y GQ + G A E GN++P+G +PEGT V N+E +
Sbjct: 57 RVVREDGVEF-----LMPAAEGMYVGQIIEIGPAAKPEAGNILPLGKIPEGTEVFNVELR 111
Query: 403 MGDRGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAG 558
GD G+LAR +G++A V+G +T ++LPSG K +P+ +R +GI AG
Sbjct: 112 PGDGGKLARQAGSYALVVGR--AGAKTILRLPSGKDKEVPNDSRATIGIPAG 161
Score = 50.0 bits (114), Expect = 5e-05
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = +2
Query: 563 GRIDKPILKAGRAYHKYKVKRNCWPYVRG 649
GRI+KPI+KAG AYHK+KVK WP VRG
Sbjct: 163 GRIEKPIMKAGFAYHKWKVKARKWPRVRG 191
>UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12;
Archaea|Rep: 50S ribosomal protein L2P - Methanosarcina
acetivorans
Length = 238
Score = 111 bits (267), Expect = 1e-23
Identities = 67/172 (38%), Positives = 95/172 (55%), Gaps = 1/172 (0%)
Frame = +1
Query: 46 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLHYAERHGYIKGVVKDIIHDPGRGAPLAV 225
MG+ + +Q +G G+ K LR E ++G V I HDP R AP+A
Sbjct: 1 MGKRLISQNRGRGTP-TYRAPSHKYKADLRHPRVDENSS-LRGEVVGIEHDPARSAPIAK 58
Query: 226 VHFRDPYKFKTRKELFI-APEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXK 402
V F+ +ELF+ A EG+ G + CG A ++ GN++P+G +PEG +CN+E K
Sbjct: 59 V------AFENGEELFLLASEGIAVGNIIECGDDAEVKPGNIVPIGNVPEGFFICNVESK 112
Query: 403 MGDRGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAG 558
D G+ R+SG +ATV+ H +A RT V +PSG K L R +VGIVAG
Sbjct: 113 PNDGGKFVRSSGVYATVVTH--EATRTAVSMPSGNIKWLNPKCRAVVGIVAG 162
Score = 35.1 bits (77), Expect = 1.5
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 563 GRIDKPILKAGRAYHKYKVKRNCWPYV 643
GR+D+P LKAG+ YHK K + +P V
Sbjct: 164 GRVDRPWLKAGKKYHKMKTRAAKYPRV 190
>UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07017 protein - Schistosoma
japonicum (Blood fluke)
Length = 112
Score = 107 bits (257), Expect = 2e-22
Identities = 49/69 (71%), Positives = 57/69 (82%)
Frame = +1
Query: 58 IRAQRKGAGSVFVSHTKKRKGAPKLRSLHYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 237
IR+QRKGAG VF +HTK RKGA +LR + +AERHGYI+GVVK+IIHDPGRGAPLA V FR
Sbjct: 1 IRSQRKGAGGVFKAHTKHRKGAARLRPVDFAERHGYIRGVVKEIIHDPGRGAPLAKVAFR 60
Query: 238 DPYKFKTRK 264
D Y +K K
Sbjct: 61 DVYSYKLIK 69
>UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10;
Archaea|Rep: 50S ribosomal protein L2P - Sulfolobus
tokodaii
Length = 238
Score = 105 bits (251), Expect = 1e-21
Identities = 64/172 (37%), Positives = 95/172 (55%), Gaps = 1/172 (0%)
Frame = +1
Query: 46 MGRVIRAQRKGAGSV-FVSHTKKRKGAPKLRSLHYAERHGYIKGVVKDIIHDPGRGAPLA 222
MG+ + QR G G + F S + +R G K+ ++ G G V DI+H+PG APLA
Sbjct: 1 MGKKLLQQRAGRGGINFRSPSWRRVGKAKIPNIE-----GEHIGKVIDIVHNPGTNAPLA 55
Query: 223 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXK 402
++ D KF + +GL GQ + GK A + GN++ VG +PEGTI+ N+E
Sbjct: 56 LIKLDDGTKFYVP-----SVQGLVVGQKIQIGKNAAISNGNIVEVGNVPEGTIISNIEKT 110
Query: 403 MGDRGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAG 558
GD G+ AR++G + V+G D + VKL S + S+ R +VG+VAG
Sbjct: 111 RGDGGKFARSAGTYGVVVGKTGD--KVLVKLSSEKIAQVSSNARAIVGVVAG 160
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +2
Query: 560 GGRIDKPILKAGRAYHKYKVKRNCWPYVRG 649
GG +KP+LKAG Y KYKVK WP+VRG
Sbjct: 161 GGVTEKPLLKAGNNYWKYKVKAKKWPHVRG 190
>UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L8 -
Encephalitozoon cuniculi
Length = 239
Score = 98.3 bits (234), Expect = 1e-19
Identities = 47/130 (36%), Positives = 77/130 (59%)
Frame = +1
Query: 169 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNV 348
+G V DI+H+ RGAP+A++ F++ + A EG+YTGQ + G A +++GN+
Sbjct: 34 EGEVIDIVHERSRGAPVAIISFKED------DCMVPASEGMYTGQKILIGDDAPIDIGNI 87
Query: 349 MPVGAMPEGTIVCNLEXKMGDRGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSS 528
+ +PEG V ++E GD G A +G+++ V+ H + T +K+PSG K + S
Sbjct: 88 TKIKNVPEGMAVNSVESVYGDGGTFAMVNGSYSLVVNHRKETNETVIKIPSGKKLTVSSE 147
Query: 529 NRGMVGIVAG 558
R +VG+VAG
Sbjct: 148 CRCIVGVVAG 157
Score = 33.5 bits (73), Expect = 4.5
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2
Query: 560 GGRIDKPILKAGRAYHKYKVKRNCWPYVRG 649
GG DKP+LKA A++K K + + +P VRG
Sbjct: 158 GGIHDKPLLKASVAHYKAKARGHVFPRVRG 187
>UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L2P - Ignicoccus hospitalis KIN4/I
Length = 251
Score = 95.5 bits (227), Expect = 1e-18
Identities = 60/172 (34%), Positives = 93/172 (54%), Gaps = 1/172 (0%)
Frame = +1
Query: 46 MGRVIRAQRKGAGSVFVSHTKKRKGAP-KLRSLHYAERHGYIKGVVKDIIHDPGRGAPLA 222
MG+ +R QR G G+ + + AP + S + +G V ++ HDPGR PLA
Sbjct: 1 MGKRLRVQRHGRGTPQWRNRGHLRVAPGRYPSPEVLKLDETYEGYVVELKHDPGRWVPLA 60
Query: 223 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXK 402
+ + F A EG+YTGQ V G A GN++P+ A+PEGT + N+E +
Sbjct: 61 HIVIPNVADF-----WIPAAEGMYTGQKVQIGPNAAPVNGNILPLYAIPEGTQIFNVEIR 115
Query: 403 MGDRGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAG 558
GD G+LAR+ G +A ++G + ++ ++LPSG K + + R +GI AG
Sbjct: 116 PGDGGKLARSGGAYAILVGKSGNS--AIIQLPSGKVKQVNAKARATIGIAAG 165
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +2
Query: 563 GRIDKPILKAGRAYHKYKVKRNCWPYVRG 649
GR +KP+LKAG AY+K+K K WP VRG
Sbjct: 167 GRDEKPLLKAGNAYYKWKAKAKKWPVVRG 195
>UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L2P -
Nanoarchaeum equitans
Length = 238
Score = 94.7 bits (225), Expect = 2e-18
Identities = 63/173 (36%), Positives = 95/173 (54%), Gaps = 2/173 (1%)
Frame = +1
Query: 46 MGRV-IRAQRKGAGS-VFVSHTKKRKGAPKLRSLHYAERHGYIKGVVKDIIHDPGRGAPL 219
MG+V + QR+G GS F S T + G K+ + G + ++KD IH APL
Sbjct: 1 MGKVRLLVQRRGRGSPTFRSPTHRAAGKVKIPTFDGDLVKGKVVALIKDSIHY----APL 56
Query: 220 AVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEX 399
VV + + + L AP G+ G VY GK+A +G++ P+ +PEGT + LE
Sbjct: 57 MVVKWENG-----AQSLLPAPLGISVGDTVYYGKEAPNAIGSIKPLSEIPEGTKIYMLEN 111
Query: 400 KMGDRGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAG 558
GD G+L RASG+FA ++ D + V+LPSG K L ++ R ++G++AG
Sbjct: 112 NPGDGGKLVRASGDFALLVQKLGD--KVIVQLPSGQFKTLSANARAVIGVIAG 162
Score = 32.7 bits (71), Expect = 7.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 560 GGRIDKPILKAGRAYHKYKVKRNCWPYVRG 649
GGR +KP +KAG Y+ + WP V G
Sbjct: 163 GGRKEKPFVKAGNKYYWASSRNRHWPVVNG 192
>UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L2
- Candidatus Nitrosopumilus maritimus SCM1
Length = 244
Score = 93.9 bits (223), Expect = 3e-18
Identities = 60/173 (34%), Positives = 87/173 (50%), Gaps = 2/173 (1%)
Frame = +1
Query: 46 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLHY--AERHGYIKGVVKDIIHDPGRGAPL 219
MG+ +R+G G T K K + +E+H +G + D++H+ GR APL
Sbjct: 1 MGKRPLVRRRGRGGNQFRSTSTGKVGTKANYPRFPLSEQH---EGEIIDLVHERGREAPL 57
Query: 220 AVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEX 399
A V F D A G G+ + G K+ +E GNV+ + +P+GTIVCN+E
Sbjct: 58 AKVRFEDG-----SVSFVPAVLGAKVGETLQFGLKSKIEKGNVISIQNIPDGTIVCNIEK 112
Query: 400 KMGDRGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAG 558
GD G + +++G ATV H + VKLPSG L NR M+G +AG
Sbjct: 113 HFGDGGAIVKSAGTDATVFSHGDEG--VTVKLPSGKFTTLNPKNRAMIGTLAG 163
>UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2;
Crenarchaeota|Rep: Ribosomal protein L2 - Cenarchaeum
symbiosum
Length = 243
Score = 87.4 bits (207), Expect = 3e-16
Identities = 58/172 (33%), Positives = 84/172 (48%), Gaps = 1/172 (0%)
Frame = +1
Query: 46 MGRVIRAQRKGAGSV-FVSHTKKRKGAPKLRSLHYAERHGYIKGVVKDIIHDPGRGAPLA 222
MG+ +R+G G + F + T + K + E+ +G V D++H+ GR APLA
Sbjct: 1 MGKRPLVRRRGRGGMQFRAATTGKIARAKYPAFELGEQR---EGTVIDLVHERGRDAPLA 57
Query: 223 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXK 402
+ F D L G G + G K+ + GNV+ V +P+GT VCN+E
Sbjct: 58 KIRFEDGIVSYVPAVL-----GTRVGSSMNFGLKSEIRDGNVISVQNIPDGTTVCNVEKH 112
Query: 403 MGDRGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAG 558
GD G + +++G ATV H +KLPSG L NR MVG +AG
Sbjct: 113 YGDGGAIVKSAGGNATVFSHGEGG--VVLKLPSGRFSTLNPKNRAMVGTLAG 162
>UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L2P -
Thermoplasma volcanium
Length = 234
Score = 84.2 bits (199), Expect = 2e-15
Identities = 60/171 (35%), Positives = 86/171 (50%), Gaps = 1/171 (0%)
Frame = +1
Query: 46 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLHYAERHGYIKGVVKDIIHDPGRGAPLAV 225
MG+ I QR+G GS+ V + + ++ L E VVKDIIH PGR +PL
Sbjct: 1 MGKHIIPQRRGHGSL-VYRSPSHRHVVDVKHLKPGEY------VVKDIIHAPGRNSPL-- 51
Query: 226 VHFRDPYKFKTRKELF-IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXK 402
+ D T K+++ IA G Y GQ + G T+ G + +P+G+ V N+E
Sbjct: 52 LELVD----STGKKVYQIAFTGAYVGQKIVAGNVDTINPGTTTVLANIPDGSYVYNIESS 107
Query: 403 MGDRGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVA 555
GD G R++G FA V+ H R +KLPSG+ + R VG+VA
Sbjct: 108 PGDGGEFCRSAGTFALVVSH---GSRVTLKLPSGSMRDFDPRCRATVGVVA 155
>UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90;
Bacteria|Rep: 50S ribosomal protein L2 - Lactobacillus
plantarum
Length = 279
Score = 79.8 bits (188), Expect = 5e-14
Identities = 53/165 (32%), Positives = 86/165 (52%), Gaps = 2/165 (1%)
Frame = +1
Query: 64 AQRKGAGSVFVSHTKKRKGAPK--LRSLHYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 237
A R G + V H R G K R + + + VK I +DP R A +A++ +
Sbjct: 41 AGRNSYGHITVRH---RGGGHKQQYRLVDFKRIKDEVPATVKAIEYDPNRTANIALLVYA 97
Query: 238 DPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRG 417
D K +AP+GL G V G +A ++VGN +P+ +P GT++ N+E K G G
Sbjct: 98 DGVK-----SYILAPKGLEVGMQVQSGAEADIKVGNALPLTNIPVGTVIHNIELKPGKGG 152
Query: 418 RLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIV 552
+LAR++G A ++G + K V+L SG +++ ++R +G V
Sbjct: 153 QLARSAGTSAQLLG--KEGKYAIVRLSSGEVRLVLLTSRATIGTV 195
>UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8
protein - Rattus norvegicus (Rat)
Length = 47
Score = 76.6 bits (180), Expect = 5e-13
Identities = 34/46 (73%), Positives = 40/46 (86%)
Frame = +1
Query: 46 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLHYAERHGYIKGVVK 183
MGRVIR QRKGAGSVF +H K RKGA +LR++ +AERHGYIKG+VK
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVK 46
>UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular
organisms|Rep: 50S ribosomal protein L2 - Mesoplasma
florum (Acholeplasma florum)
Length = 281
Score = 74.9 bits (176), Expect = 1e-12
Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 1/154 (0%)
Frame = +1
Query: 61 RAQRKGAGSVFVSHTKKRKGAPKLRSLHYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRD 240
+A R G + H K K R + + + G + I +DP R A + +V++ D
Sbjct: 41 KAGRNNRGLITTRH-KGGGHKQKYRIIDFKRNKRDVVGTIATIEYDPNRNAFICLVNYLD 99
Query: 241 PYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGR 420
K R LF +G+ G + + A ++VGN P+ +PEGT++ N+E K G G+
Sbjct: 100 GEK---RYILFA--KGMTVGMKIVASEHADIKVGNAAPLKNIPEGTLIHNVELKPGKGGQ 154
Query: 421 LARASGNFATVIGHNPDAKRTXVKLPSG-AKKVL 519
+AR++G ++G + D K ++L SG +KVL
Sbjct: 155 MARSAGTSVQILGKDDDGKYVTLRLTSGEVRKVL 188
>UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2;
n=423; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 274
Score = 74.1 bits (174), Expect = 3e-12
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 2/162 (1%)
Frame = +1
Query: 73 KGAGSVFVSHTKKRKGAPK--LRSLHYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 246
KG + + + R G K R + + I G + I +DP R A + ++H+ D
Sbjct: 39 KGRNARGIITARHRGGGHKRLYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYGDG- 97
Query: 247 KFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLA 426
K + P G G + G + +++GN +P+ MP GT + N+E +G G+LA
Sbjct: 98 ----EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLA 153
Query: 427 RASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIV 552
RA+G A +I + K +KLPSG +++ + VG V
Sbjct: 154 RAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQV 193
>UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and
organelle form; n=5; cellular organisms|Rep: Ribosomal
protein L2, bacterial and organelle form - Ostreococcus
tauri
Length = 294
Score = 73.3 bits (172), Expect = 5e-12
Identities = 46/168 (27%), Positives = 86/168 (51%), Gaps = 1/168 (0%)
Frame = +1
Query: 61 RAQRKGAGSVFVSHTKKRKGAPKL-RSLHYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 237
R R AG + V H K G +L R + + ++G ++ + +DP R A +A+V
Sbjct: 65 RGGRNNAGRITVWH--KGGGHKRLYRVIDFKRDLTGVRGTIRRLEYDPNRSAHIALVD-- 120
Query: 238 DPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRG 417
Y+ +AP G G + G ++ ++VGN +P+ +P T + N+E G G
Sbjct: 121 --YEGGNASRYVLAPHGSTPGDALESGPESDIKVGNALPLKNIPLQTTIHNIELVPGRGG 178
Query: 418 RLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAGR 561
+L R++G+ AT++ D V+LPSG ++++ + +G+++ R
Sbjct: 179 QLCRSAGSAATLVKKADDGGYCVVRLPSGEQRLVLENCMATIGMLSNR 226
>UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellular
organisms|Rep: 50S ribosomal protein L2 - Brucella
melitensis
Length = 277
Score = 71.3 bits (167), Expect = 2e-11
Identities = 41/141 (29%), Positives = 74/141 (52%)
Frame = +1
Query: 133 RSLHYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVY 312
R + + R + G V+ + +DP R A +A++ + D +AP+ L G V
Sbjct: 63 RFIDFKRRKLDVVGTVERLEYDPNRTAFIALIRYTDG-----ELAYILAPQRLAVGDQVV 117
Query: 313 CGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARASGNFATVIGHNPDAKRTXVK 492
G ++ GN MP+ +MP GTI+ N+E G G++AR++G +A ++G D ++
Sbjct: 118 AGNSVDVKPGNAMPLSSMPVGTIIHNVELMPGKGGQIARSAGTYAQLVGR--DQGMAILR 175
Query: 493 LPSGAKKVLPSSNRGMVGIVA 555
L SG ++++ + VG V+
Sbjct: 176 LNSGEQRLVSGACFASVGAVS 196
>UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellular
organisms|Rep: 50S ribosomal protein L2 - Aquifex
aeolicus
Length = 304
Score = 67.3 bits (157), Expect = 3e-10
Identities = 52/174 (29%), Positives = 82/174 (47%), Gaps = 10/174 (5%)
Frame = +1
Query: 61 RAQRKGAGSVFVSHTKKRKGAPKL-RSLHYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 237
+ + + G++ H + G KL R + + + V I +DP R A + ++H+
Sbjct: 56 KGRSRQRGNITARH--RGGGHKKLYRIIDFKRDKSLVPAKVVSIEYDPFRSARICLLHYA 113
Query: 238 DPYKFKTRKELFIAPEGLYTGQFVY--------CGKKAT-LEVGNVMPVGAMPEGTIVCN 390
D K I PEGL G V GK ++ GN MP+ +PEGTIV N
Sbjct: 114 DG-----EKRYIIWPEGLKVGDTVMSISWEDAEAGKPLPEIKPGNAMPLKYIPEGTIVHN 168
Query: 391 LEXKMGDRGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIV 552
+E G G++ARA+G +A V+G + V++PSG +++ VG V
Sbjct: 169 IEFIPGKGGQIARAAGTWAQVLGRSTRKGYVLVRMPSGEVRMIHERCMATVGRV 222
>UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17;
Bacteria|Rep: 50S ribosomal protein L2 - Mycoplasma
pneumoniae
Length = 287
Score = 66.1 bits (154), Expect = 7e-10
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 2/164 (1%)
Frame = +1
Query: 70 RKGAGSVFVSHTKKRKGAPKLRSLHYAERH-GYIKGVVKDIIHDPGRGAPLAVVHFRDPY 246
R G + V H R K R + + H I+ VK I +DP R ++++ + +
Sbjct: 47 RNNQGKITVRHQGGRNKR-KYRIIDFKRTHYDNIEATVKSIEYDPNRSCFVSLITYANG- 104
Query: 247 KFKTRKELFIAPEGLYTGQFVYCGKKAT-LEVGNVMPVGAMPEGTIVCNLEXKMGDRGRL 423
K I+P+G+ G + + ++ G MP+ +PEGT V N+E G++
Sbjct: 105 ----AKSYIISPDGIKVGDKILASEHPIDIKPGFSMPLAFIPEGTQVHNIELHPKGGGQI 160
Query: 424 ARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVA 555
AR++G++A ++G + K ++L SG + R VG+V+
Sbjct: 161 ARSAGSYARILGQDETGKYVILQLLSGETRKFLKECRATVGVVS 204
>UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;
n=2; Embryophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Marchantia polymorpha (Liverwort)
Length = 501
Score = 58.8 bits (136), Expect = 1e-07
Identities = 29/73 (39%), Positives = 43/73 (58%)
Frame = +1
Query: 337 VGNVMPVGAMPEGTIVCNLEXKMGDRGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKV 516
VGN +P+ +P GT V N+E G +L RA+G FA +I + + V+LPSG K+
Sbjct: 359 VGNCIPLAKIPIGTWVHNIERNPGQGAKLTRAAGTFAQIIQKVENTPQCIVRLPSGVDKL 418
Query: 517 LPSSNRGMVGIVA 555
+ S R +GIV+
Sbjct: 419 IDSRCRATIGIVS 431
>UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein L2 - Chlorokybus
atmophyticus (Soil alga)
Length = 368
Score = 58.0 bits (134), Expect = 2e-07
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Frame = +1
Query: 274 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARASGNFATV 453
+A L G FV G + GN +P+ ++P GT+V N+E G G++ RA+G A +
Sbjct: 199 LASHQLKAGDFVSSGPNVEIRTGNALPLISIPLGTLVHNIELYPGSGGQVVRAAGTSAQL 258
Query: 454 I-GHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVA 555
I HN K ++LPSG K P +GIV+
Sbjct: 259 IKKHN---KYAILRLPSGELKSFPLQCMATIGIVS 290
>UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellular
organisms|Rep: 50S ribosomal protein L2 - Methylococcus
capsulatus
Length = 281
Score = 58.0 bits (134), Expect = 2e-07
Identities = 35/126 (27%), Positives = 67/126 (53%)
Frame = +1
Query: 178 VKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPV 357
V+ I +DP R A +A+V +RD + +AP GL G + G+ A ++VGN +P+
Sbjct: 84 VERIEYDPNRTAYIALVLYRDG-----ERRYIVAPAGLSAGSEIVAGEFAAIKVGNSLPL 138
Query: 358 GAMPEGTIVCNLEXKMGDRGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRG 537
+P GT+V +E K G + AR++G ++ + + +++ SG + + + +
Sbjct: 139 RNIPVGTVVHCVEGKPGKGAQYARSAGTSIQLVA--KEGEYATLRMRSGEMRKVLADCKA 196
Query: 538 MVGIVA 555
+G V+
Sbjct: 197 TIGEVS 202
>UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5;
Tracheophyta|Rep: Ribosomal protein L2 - Selaginella
uncinata (Blue spikemoss) (Peacock spikemoss)
Length = 282
Score = 57.2 bits (132), Expect = 3e-07
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 2/161 (1%)
Frame = +1
Query: 70 RKGAGSVFVSHTKKRKGAPKLRSLHYAERHGY--IKGVVKDIIHDPGRGAPLAVVHFRDP 243
R+G + + ++ R G K H R + G + + +DP R A ++ VH D
Sbjct: 40 RRGRNNRGIVTSRHRGGGHKRPYRHIDPRRSKRGVPGRIITVEYDPNRSAYISPVHHGDG 99
Query: 244 YKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRL 423
K PEG+ G + G A VGN P MP GT++ +E G G+
Sbjct: 100 -----DKGYISHPEGIRVGDAIPTGPGAPTTVGNAPPPTHMPLGTVMHGIEVAPGKGGQS 154
Query: 424 ARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVG 546
ARA+G A + + + +LP G + +P + +VG
Sbjct: 155 ARAAGAPAKPVA--KEGQSATSRLPPGEVRSIPQNRPAVVG 193
>UniRef50_A3LNH9 Cluster: Predicted protein; n=5;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 364
Score = 56.8 bits (131), Expect = 4e-07
Identities = 23/77 (29%), Positives = 47/77 (61%)
Frame = +1
Query: 331 LEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARASGNFATVIGHNPDAKRTXVKLPSGAK 510
++ GN +P+ +P G+I+ N+ G RG+L +A+G FA ++ +P+ K+ +KL SG
Sbjct: 212 MQRGNCLPLHMLPVGSIIHNIGLHPGGRGQLVKAAGTFARLLSKHPEEKKVVIKLSSGEH 271
Query: 511 KVLPSSNRGMVGIVAGR 561
+ + + +G+V+ +
Sbjct: 272 RYVHMNCHATLGVVSNK 288
>UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome.
precursor; n=9; Pezizomycotina|Rep: Contig An01c0260,
complete genome. precursor - Aspergillus niger
Length = 414
Score = 56.8 bits (131), Expect = 4e-07
Identities = 53/185 (28%), Positives = 82/185 (44%), Gaps = 23/185 (12%)
Frame = +1
Query: 70 RKGAGSVFVSHTKKRKGAPK--LRSLHYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP 243
R +G V V H R G K +R + +A R VV+ I HDPGR A +A+V ++
Sbjct: 108 RNNSGRVTVRH---RGGGHKRRIRMVDFA-RDAPGPHVVERIEHDPGRSAHIALVRSQET 163
Query: 244 YKFKTRKELFIAPEGLYTGQFVYCGKKATLEV---------------------GNVMPVG 360
K +A EG+ G V+ E GN +P+
Sbjct: 164 KKLS----YILAAEGMRAGDVVHSYMSGIPEELWKSMGGTVDPGVLAARTAWRGNCLPLH 219
Query: 361 AMPEGTIVCNLEXKMGDRGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGM 540
MP GT+V N+ + G G+L R++G FATVI ++ ++L SG +++
Sbjct: 220 MMPVGTLVFNVGLRPGQGGQLCRSAGTFATVIAKERISQHVTIRLQSGEVRLIHKDCCAT 279
Query: 541 VGIVA 555
VG+ +
Sbjct: 280 VGVAS 284
>UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular
organisms|Rep: Ribosomal protein L2 - Physcomitrella
patens (Moss)
Length = 463
Score = 54.8 bits (126), Expect = 2e-06
Identities = 29/73 (39%), Positives = 42/73 (57%)
Frame = +1
Query: 337 VGNVMPVGAMPEGTIVCNLEXKMGDRGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKV 516
VGN + + +P GT V N+E G +L RA+G FA +I + + V+LPSG K+
Sbjct: 321 VGNCVSLANIPIGTWVHNIEWNPGQGAKLIRAAGTFAQIIKKFENTPQCIVRLPSGVDKL 380
Query: 517 LPSSNRGMVGIVA 555
+ S R VGIV+
Sbjct: 381 IDSRCRATVGIVS 393
>UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 185
Score = 53.6 bits (123), Expect = 4e-06
Identities = 28/87 (32%), Positives = 52/87 (59%)
Frame = -1
Query: 417 TSITHFXFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVEPFGSNEELLPCLELVWI 238
T++TH +AHNGTL S R +I+N + L+TI++L V G +E+L L +
Sbjct: 7 TTVTHMVLNVAHNGTLGDGSKRQYIANNEIGLLATIDELVGVHALGGDEQLFLMLVPEGV 66
Query: 237 AEVYNSQRCTSTRVMDYILNNSLDVSM 157
AE +S+ + ++D + +++L+V++
Sbjct: 67 AEGNSSKWGAAIGIVDDLGDHTLEVAI 93
>UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep:
Ribosomal protein L2 - Zea mays (Maize)
Length = 448
Score = 53.2 bits (122), Expect = 5e-06
Identities = 29/74 (39%), Positives = 45/74 (60%)
Frame = +1
Query: 334 EVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARASGNFATVIGHNPDAKRTXVKLPSGAKK 513
+VGN +P+ GT V N+E + G G++ RA+G +A V+ P AK ++LPSGA+K
Sbjct: 295 KVGNCIPLANARIGTWVHNIECRPGQGGKMVRAAGTYAKVV-QEPGAK-CVLRLPSGAEK 352
Query: 514 VLPSSNRGMVGIVA 555
+ S +GIV+
Sbjct: 353 AVDSRCHATIGIVS 366
>UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep:
Ribosomal protein L2 - Carsonella ruddii
Length = 235
Score = 52.0 bits (119), Expect = 1e-05
Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 5/187 (2%)
Frame = +1
Query: 73 KGAGSVFVSHTKKRKGAPKLRSLHYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKF 252
+ G + V H K K R + + IKG+V+ I +DP R A +A++ + D
Sbjct: 18 RSRGKISVRHIGK-KHKKFYRKIDFKRDKSNIKGIVESIHYDPNRNARIALIKYLD---- 72
Query: 253 KTRKELFIAPEGLYTGQFVYCG-KKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLAR 429
K I L FV K +L GN + + GT++ +E G +R
Sbjct: 73 -GEKRYIIKTNNLEISNFVVSSLNKISLNSGNSTIIKNINIGTLINCVEIFPKIGGIFSR 131
Query: 430 ASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAGRWTY*QTY---FESWKG 600
+SG+ + +I D K +KLPSG KK + + +G + + Y W+G
Sbjct: 132 SSGSESEII--FKDNKFGVIKLPSGIKKKISLNCMATIGKICTFNVKKKLYKAGQNRWRG 189
Query: 601 I-PQVQG 618
I P V+G
Sbjct: 190 IRPTVRG 196
>UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;
n=24; Spermatophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Oryza sativa subsp. japonica (Rice)
Length = 502
Score = 52.0 bits (119), Expect = 1e-05
Identities = 28/74 (37%), Positives = 45/74 (60%)
Frame = +1
Query: 334 EVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARASGNFATVIGHNPDAKRTXVKLPSGAKK 513
+VGN +P+ + GT V ++E G +LARA+G +A +I A + V+LPSG +K
Sbjct: 359 KVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKII--KEPASQCLVRLPSGVEK 416
Query: 514 VLPSSNRGMVGIVA 555
++ S R +GIV+
Sbjct: 417 LIDSRCRATIGIVS 430
>UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2;
Streptophytina|Rep: Ribosomal protein L2 - Chara
vulgaris (Common stonewort)
Length = 262
Score = 51.6 bits (118), Expect = 2e-05
Identities = 49/174 (28%), Positives = 82/174 (47%), Gaps = 10/174 (5%)
Frame = +1
Query: 64 AQRKGAGSVFVSHTKKRKGAPKLRSLHYAERHGYIKGVVKDIIHDPGRGAPLAVVHF--- 234
A R G + + H + A +L+ +R+ + G V+ I +DP R + +A+V +
Sbjct: 23 AGRNSTGRITLFH--RGSHAKRLQRRIDFQRNTSLTGKVERIEYDPNRSSWIALVRWYSG 80
Query: 235 -RDPYK--FKTRKELFIAPEGLYTGQFVYCGKKA--TLE--VGNVMPVGAMPEGTIVCNL 393
P TR +A + TG V + LE +GN + + +P GT++ N+
Sbjct: 81 STQPQHQTASTRFTYILACDKFKTGSPVMNNVHSFGNLEQALGNCVQLAYIPVGTLIHNI 140
Query: 394 EXKMGDRGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVA 555
E G + RA+G FA +I + R ++LPSGA + S R +GIV+
Sbjct: 141 EWNPGQGAKFVRAAGTFAQLIQKHEATVR--LRLPSGALASINSQCRATIGIVS 192
>UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 169
Score = 49.6 bits (113), Expect = 6e-05
Identities = 25/73 (34%), Positives = 41/73 (56%)
Frame = +1
Query: 337 VGNVMPVGAMPEGTIVCNLEXKMGDRGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKV 516
+G+ MP+G M GTI+ N+E G ++ RA+G A ++ P + +KLPSG K
Sbjct: 14 IGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKIL-KEPAKGKCLIKLPSGDTKW 72
Query: 517 LPSSNRGMVGIVA 555
+ + R +G V+
Sbjct: 73 INAKCRATIGTVS 85
>UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 128
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +1
Query: 265 ELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEG 375
E + E +YTGQFV C KKATL V NV+P+ + PEG
Sbjct: 40 EPIVVAESIYTGQFVCCSKKATLIVDNVLPLRSTPEG 76
>UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondrial
precursor; n=6; Ascomycota|Rep: 54S ribosomal protein
RML2, mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 393
Score = 48.4 bits (110), Expect = 1e-04
Identities = 22/76 (28%), Positives = 41/76 (53%)
Frame = +1
Query: 328 TLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARASGNFATVIGHNPDAKRTXVKLPSGA 507
T + GN +P+ +P GTI+ N+ G+ R++G +A V+ P+ K+ V+L SG
Sbjct: 234 TTQRGNCLPISMIPIGTIIHNVGITPVGPGKFCRSAGTYARVLAKLPEKKKAIVRLQSGE 293
Query: 508 KKVLPSSNRGMVGIVA 555
+ + +G+V+
Sbjct: 294 HRYVSLEAVATIGVVS 309
>UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6;
Eurotiomycetidae|Rep: 50S ribosomal protein L2 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 404
Score = 47.6 bits (108), Expect = 3e-04
Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 19/158 (12%)
Frame = +1
Query: 61 RAQRKGAGSVFVSHTKKRKGAPKLRSLHYAERHGYIKG--VVKDIIHDPGRGAPLAVVHF 234
R Q KG + T + +G R + + G +V+ I HDPGR A +A+V
Sbjct: 100 RGQGKGGRNNTGRVTVRHRGGGHKRRIRIVDFARTAPGPHLVERIEHDPGRSAHIALVRS 159
Query: 235 RDPYKFK-------------TRKELFIAPEGLYT--GQFVYCGKKA--TLEVGNVMPVGA 363
++ K + + PE L+ G V G A T GN +P+
Sbjct: 160 QETQKLSYILAAEGMRAGDVVQSYMSGIPEDLWKSMGGTVDPGVLAARTAWRGNCLPLHM 219
Query: 364 MPEGTIVCNLEXKMGDRGRLARASGNFATVIGHNPDAK 477
+P GT++ N+ + G G+L R++G +ATVI D K
Sbjct: 220 IPVGTLIFNVGLRPGKGGQLCRSAGTYATVISKGSDTK 257
>UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-PA -
Drosophila pseudoobscura (Fruit fly)
Length = 297
Score = 46.8 bits (106), Expect = 5e-04
Identities = 35/109 (32%), Positives = 54/109 (49%)
Frame = +1
Query: 175 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMP 354
+V +I+HD R A +A+V D K+ E A + L T + + E G+ P
Sbjct: 110 LVVEILHDGCRTAKVALVAVGDELKYILATENMKAGDVLKTSRVIPRIPVRPNE-GDAYP 168
Query: 355 VGAMPEGTIVCNLEXKMGDRGRLARASGNFATVIGHNPDAKRTXVKLPS 501
+GA+P GT + LE G + L A+G F T++ D + V+LPS
Sbjct: 169 LGALPVGTRIHCLEKNPGQQCHLIHAAGTFGTILRKFDD--KVVVQLPS 215
>UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;
n=1; Acanthamoeba castellanii|Rep: Mitochondrial 60S
ribosomal protein L2 - Acanthamoeba castellanii (Amoeba)
Length = 253
Score = 46.4 bits (105), Expect = 6e-04
Identities = 34/141 (24%), Positives = 66/141 (46%)
Frame = +1
Query: 133 RSLHYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVY 312
R + Y I G V + +DP R + +A++ + + +APEGL G ++
Sbjct: 44 RLIDYKRYIWNIFGFVHRVEYDPKRNSLIALIVYSNGVM-----SYILAPEGLLVGDCIF 98
Query: 313 CGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARASGNFATVIGHNPDAKRTXVK 492
+ L+ GN + +P G + ++E + RA+G++AT+I + K +K
Sbjct: 99 AKENIVLKPGNSTYLQHIPIGLKINSIELSENKGAQFIRAAGSYATII--SKFEKIVILK 156
Query: 493 LPSGAKKVLPSSNRGMVGIVA 555
L SG + + S+ +G ++
Sbjct: 157 LKSGELRRVHSNCMATIGSIS 177
>UniRef50_Q5IX18 Cluster: 50S ribosomal protein L2; n=1; Prototheca
wickerhamii|Rep: 50S ribosomal protein L2 - Prototheca
wickerhamii
Length = 218
Score = 46.0 bits (104), Expect = 8e-04
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 4/117 (3%)
Frame = +1
Query: 70 RKGAGSVFVSHTKKRKGAPKL-RSLHYAERHGYIKGVVKDIIHDPGRGAPLAVVHF---R 237
R AG V H + G +L R + + G V+ + +DP R A LA++ R
Sbjct: 102 RNAAGCVTARH--RGGGQRRLYRLVDFVRGAASPAGTVERLEYDPIRSARLALLRLDGAR 159
Query: 238 DPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMG 408
+ + T +AP G+ G V CG A + G+ +P+ A+P G + N+E + G
Sbjct: 160 EGERSPTSHAYVLAPAGVGPGDRVMCGATAPIVPGSSLPLSAIPVGMPIHNVELRPG 216
>UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondrial;
n=2; Saccharomycetales|Rep: 60S ribosomal protein RML2,
mitochondrial - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 376
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/77 (25%), Positives = 42/77 (54%)
Frame = +1
Query: 331 LEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARASGNFATVIGHNPDAKRTXVKLPSGAK 510
L+ GN +P+ +P G+I+ + R +L RA+G F ++G + + + +KL SG +
Sbjct: 220 LQRGNCLPLRMIPVGSIIHCIGLNSQRRSQLVRAAGTFGKILGKDQERQLAIIKLCSGEQ 279
Query: 511 KVLPSSNRGMVGIVAGR 561
+ + +G+V+ +
Sbjct: 280 RYISLDCHATLGVVSNK 296
>UniRef50_A7CUV2 Cluster: Ribosomal protein L2; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein L2 - Opitutaceae
bacterium TAV2
Length = 288
Score = 43.6 bits (98), Expect = 0.004
Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 6/167 (3%)
Frame = +1
Query: 70 RKGAGSVFVSHTKKRKGAPKLRSLHYAERHGYIKGVVKDII---HDPGRGAPLAVVHFRD 240
+ G +V+ T +R+G + + + V ++I +DP R A LA++ + +
Sbjct: 39 KTGGRNVYGRITSRRRGGGHKKLYRIIDFRRDLIDVPAEVIALEYDPNRTAHLALLKYEN 98
Query: 241 PYKFKTRKELFIAPEGLYTGQFVYCGKKATLE---VGNVMPVGAMPEGTIVCNLEXKMGD 411
K IAP GL G + KATL GN P+ +P T + +E G
Sbjct: 99 G-----DKRYIIAPLGLKVGAKIVTSNKATLNDYVTGNNYPLSIIPPSTKLHCVELVPGK 153
Query: 412 RGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIV 552
+L R +G ++ + +K+PSG +++ R +G V
Sbjct: 154 GAQLGRTAGTSIELVA--VENGYAQLKMPSGEIRLVNPKCRATIGEV 198
>UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma
gondii|Rep: Ribosomal protein L2 - Toxoplasma gondii
Length = 267
Score = 43.6 bits (98), Expect = 0.004
Identities = 36/112 (32%), Positives = 56/112 (50%)
Frame = +1
Query: 184 DIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGA 363
+II+D R LAV +F K F+ + L G + G KA L++GN +P+
Sbjct: 67 NIIYDSFRRIFLAV-YFIINSIIKNIYRYFLLTKNLKIGSQINFGFKAPLKIGNALPLYK 125
Query: 364 MPEGTIVCNLEXKMGDRGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVL 519
+ G+ + N+E + +G L + + N +I D T VKLPSG K+L
Sbjct: 126 ILLGSFIYNIEIRYKGKGSLVK-NANHNAIILMIGDIYVT-VKLPSGEIKLL 175
>UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10;
Magnoliophyta|Rep: 50S ribosomal protein L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 144
Score = 43.2 bits (97), Expect = 0.006
Identities = 24/63 (38%), Positives = 36/63 (57%)
Frame = +1
Query: 364 MPEGTIVCNLEXKMGDRGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMV 543
MP GT + N+E +G G+LARA+G A +I + K +KLPSG +++ + V
Sbjct: 3 MPLGTAIHNIEITLGRGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATV 60
Query: 544 GIV 552
G V
Sbjct: 61 GQV 63
>UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE45450p
- Drosophila melanogaster (Fruit fly)
Length = 294
Score = 43.2 bits (97), Expect = 0.006
Identities = 33/109 (30%), Positives = 53/109 (48%)
Frame = +1
Query: 175 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMP 354
+V +++ D R A +A+V D K+ E A + L T +F+ E G+ P
Sbjct: 107 LVLEVLRDGCRTAKVALVAVGDELKYILATENMKAGDILKTSRFIPRIPVRPNE-GDAYP 165
Query: 355 VGAMPEGTIVCNLEXKMGDRGRLARASGNFATVIGHNPDAKRTXVKLPS 501
+GA+P GT + LE G L A+G F T++ ++ V+LPS
Sbjct: 166 LGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTIL--RKFDEKVVVQLPS 212
>UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_3264, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 66
Score = 42.7 bits (96), Expect = 0.007
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +1
Query: 46 MGRVIRAQRKGAGSVFVSHTKKRK 117
MGRVIRAQRKG GS+F SHT RK
Sbjct: 1 MGRVIRAQRKGVGSIFKSHTHHRK 24
>UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome
shotgun sequence; n=2; Eumetazoa|Rep: Chromosome 17
SCAF14762, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 259
Score = 41.1 bits (92), Expect = 0.022
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Frame = +1
Query: 178 VKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFV----YCGKKA-TLEVG 342
V ++ +DP R A +A+V + RK IA E + G + G+ A + G
Sbjct: 111 VVEVRYDPCRSADIALVAGGN------RKRWIIATENMQAGDVIKTSAVIGRMAVSANEG 164
Query: 343 NVMPVGAMPEGTIVCNLEXKMGDRGRLARASGNFATVI 456
+ P+GA+P GT+V NLE + G RA+G ++
Sbjct: 165 DAYPLGALPVGTLVNNLEIQPGKGSEYIRAAGTSGVLL 202
>UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr12 scaffold_36, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 166
Score = 40.7 bits (91), Expect = 0.030
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = -1
Query: 417 TSITHFXFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVEPFGSNEELLPCLELVWI 238
T +TH +AHNGTL S R +I+N + L+ +++L V +E+L L +
Sbjct: 19 TMVTHMVLNVAHNGTLGDGSKRQNIANNEIGLLAIVDELVGVHALDGDEQLFLMLVPEGM 78
Query: 237 AE 232
AE
Sbjct: 79 AE 80
>UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2).; n=2;
Deuterostomia|Rep: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2). - Takifugu
rubripes
Length = 255
Score = 40.3 bits (90), Expect = 0.039
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Frame = +1
Query: 178 VKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKA-TLEVGNVMP 354
V ++ +DP R A +A+V + ++ E A + + T + G+ A + + G+ P
Sbjct: 77 VVEVRYDPCRSADIALVAGGNRKRWIIATENMQAEDIIKTSAVI--GRMAVSAKEGDAYP 134
Query: 355 VGAMPEGTIVCNLEXKMGDRGRLARASGNFATVI 456
+GA+P GT+V NLE + G RA+G ++
Sbjct: 135 LGALPVGTLVNNLEIQPGKGSEYIRAAGTSGVLL 168
>UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_288, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 315
Score = 40.3 bits (90), Expect = 0.039
Identities = 24/94 (25%), Positives = 44/94 (46%)
Frame = -1
Query: 543 DHASVA*WQNLLGSRR*LYXCTLSIRIVSNHSGEVSRGTCQTTSITHFXFKIAHNGTLRH 364
+H S + W NLL R L IR+V++ + ++ + TSIT+ F + GT
Sbjct: 68 NHCSASTWNNLLSPRWELDPAGAIIRVVADDNSSLAGCPGEDTSITNVIFNVTDLGTFGS 127
Query: 363 SSNRHHISNFKSCFLSTINKLACVEPFGSNEELL 262
+ ++ + FL+ N+LA V ++ +
Sbjct: 128 RAQGQNVIGNEGGFLTAANELARVYALSHHDRFI 161
>UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial
precursor; n=24; Euteleostomi|Rep: 39S ribosomal protein
L2, mitochondrial precursor - Homo sapiens (Human)
Length = 305
Score = 39.9 bits (89), Expect = 0.052
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Frame = +1
Query: 100 HTKKRKGAPKLRSLHYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIA 279
H ++ + LR + G + V + +DP R A +A+V +RK IA
Sbjct: 100 HKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIA 153
Query: 280 PEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARASGNF 444
E + G + + G+ A G+ P+GA+P GT++ N+E + G + RA+G
Sbjct: 154 TENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTC 213
Query: 445 ATVI 456
++
Sbjct: 214 GVLL 217
>UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus
Carsonella ruddii|Rep: Ribosomal protein L2 - Carsonella
ruddii
Length = 235
Score = 39.5 bits (88), Expect = 0.068
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 5/161 (3%)
Frame = +1
Query: 151 ERHGY-IKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKA 327
+R+ Y I G+V+ I +DP R A +A++ + D K K + E + + +
Sbjct: 42 KRNKYNILGIVESIHYDPNRNAKIALIKYLDGDK----KYIIKTNELEVSDKIISSLNNV 97
Query: 328 TLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARASGNFATVIGHNPDAKRTXVKLPSGA 507
L+ GN + + GT++ E +G +R++G+ + +I N + +KL SG
Sbjct: 98 ILKPGNSTIIKNINVGTLINCFESIPKTKGIFSRSAGSESEIIFKNNNF--GIIKLSSGI 155
Query: 508 KKVLPSSNRGMVGIVAGRWTY*QTY---FESWKGI-PQVQG 618
KK + + +G + + Y WKGI P V+G
Sbjct: 156 KKKISINCMATIGKICTFNLNKKLYKAGQNRWKGIRPTVRG 196
>UniRef50_Q9G8Q6 Cluster: Ribosomal protein L2; n=1; Naegleria
gruberi|Rep: Ribosomal protein L2 - Naegleria gruberi
Length = 268
Score = 39.1 bits (87), Expect = 0.090
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 4/148 (2%)
Frame = +1
Query: 70 RKGAGSVFVSHTKK-RKGAPKLRSLHYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP- 243
R G + V H ++ K +L +Y + Y VV+ + +DP R + +V++++
Sbjct: 41 RDNQGHITVYHKERGHKKLYRLVDFYYLKDIPY---VVESLEYDPNRSGFINLVYYKNGI 97
Query: 244 YKFKTRKELFIAPEGLYTGQFVYCGKKAT--LEVGNVMPVGAMPEGTIVCNLEXKMGDRG 417
Y F +A + G C K L+ GN +P G+IV N+ ++
Sbjct: 98 YSF------ILATHNTFIGNVYMCNMKFFDFLKTGNRSLFFNLPIGSIVHNVATTFNEKA 151
Query: 418 RLARASGNFATVIGHNPDAKRTXVKLPS 501
+ R++G F ++ + VKLPS
Sbjct: 152 KYLRSAGTFGLLL--KKENNMALVKLPS 177
>UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 382
Score = 39.1 bits (87), Expect = 0.090
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +1
Query: 340 GNVMPVGAMPEGTIVCNLEXKMGDRGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVL 519
GN +P+ +P GT+V N+ +M R++G +AT+I + + K+ +G V+
Sbjct: 154 GNCLPMHMIPVGTVVYNVGSRMDGGAVFCRSAGTYATIISKEEETRDDGTKVMTGKHVVV 213
>UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02322 protein - Schistosoma
japonicum (Blood fluke)
Length = 393
Score = 38.7 bits (86), Expect = 0.12
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1
Query: 340 GNVMPVGAMPEGTIVCNLEXKMGDRGRLARASGNFATVI 456
G+ PVGA+P GT++ E K G R +G+ ATV+
Sbjct: 186 GDAYPVGALPVGTVISQFEIKPGQGALFCRTAGSSATVV 224
>UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2;
Filobasidiella neoformans|Rep: Ribosomal protein L2,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 481
Score = 38.7 bits (86), Expect = 0.12
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +1
Query: 319 KKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARASGNFATVIGH 462
+ TL+ GNV+P+ +P G V N+ + R +L R++G F V+ H
Sbjct: 290 RTVTLKPGNVLPLYLIPPGMQVHNISLTVDGRMQLCRSAGTFGQVVSH 337
>UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas
danica|Rep: Ribosomal protein L2 - Ochromonas danica
Length = 261
Score = 37.9 bits (84), Expect = 0.21
Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 1/130 (0%)
Frame = +1
Query: 169 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVY-CGKKATLEVGN 345
K V+ + +D R A L ++F D K K +++ + Y G + K+ G
Sbjct: 75 KSVIIGVSYDSNRTA-LTSINF-DILKKKFFNDIYT--KDTYIGNIINRIDSKSEFRNGF 130
Query: 346 VMPVGAMPEGTIVCNLEXKMGDRGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPS 525
+ + +P GTI+ N+ + + +++GNFA +I D + +KLPSG P
Sbjct: 131 RLLLKQIPTGTIINNIGNINSKKSKYVKSAGNFAELI--QKDTENAKLKLPSGKIIKHPI 188
Query: 526 SNRGMVGIVA 555
++ +G ++
Sbjct: 189 TSLATIGSIS 198
>UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3;
Dictyosteliida|Rep: Ribosomal protein L2 - Dictyostelium
citrinum
Length = 266
Score = 36.7 bits (81), Expect = 0.48
Identities = 21/79 (26%), Positives = 41/79 (51%)
Frame = +1
Query: 319 KKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARASGNFATVIGHNPDAKRTXVKLP 498
K+ L+VG + +PEG ++ N+E +L+RA+G + +I + K + VKL
Sbjct: 102 KQGILQVGYTTKIKNIPEGILINNIELMENSGSKLSRAAGTSSLII-KQYNKKYSLVKLS 160
Query: 499 SGAKKVLPSSNRGMVGIVA 555
S +++ + +G V+
Sbjct: 161 SKECRLISNECYATIGTVS 179
>UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria
tenella|Rep: Ribosomal protein L2 - Eimeria tenella
Length = 273
Score = 36.3 bits (80), Expect = 0.64
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = +1
Query: 298 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEXKMGDRGRLARASGNFATVIGHNPDAK 477
G +Y G+ L++GN++P+ +P G+ + N+E + S A +I K
Sbjct: 109 GDIIYIGETIELKIGNILPIKKIPCGSWIHNIEHNPTKGAVFVKNSKISAFLI--YIGKK 166
Query: 478 RTXVKLPSGAKKVL 519
+KLPSG ++L
Sbjct: 167 YVTIKLPSGEIRLL 180
>UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 321
Score = 36.3 bits (80), Expect = 0.64
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 340 GNVMPVGAMPEGTIVCNLE-XKMGDRGRLARASGNFATVIGHNPDAKRTXVKLP 498
GN P+G++ GT++ ++E D +A+G AT++ H D T VKLP
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLP 211
>UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 719
Score = 34.3 bits (75), Expect = 2.6
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = -1
Query: 558 SSNNTDHASVA*WQNLLGSRR*LYXCTLSIRIVS--NHSGEVSR 433
+SNNT++ SV WQN L +RR L T +R+ S N +V R
Sbjct: 42 ASNNTNYGSVGRWQNFLDTRRQLVTGTHVLRLASCQNDQSQVVR 85
>UniRef50_Q9UTS5 Cluster: Zinc finger protein zas1; n=3;
Schizosaccharomyces pombe|Rep: Zinc finger protein zas1
- Schizosaccharomyces pombe (Fission yeast)
Length = 897
Score = 34.3 bits (75), Expect = 2.6
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = -2
Query: 569 YVHLPATIPTMPLLLDGRTFLAPDGSFTXVRLASGLCPITVAKFPEARARRPLSPIXXSR 390
+ +LPAT+P F P F +L SGL V+ +P+ + +P SR
Sbjct: 242 FPNLPATVPITQAASTANAFQQPSNQFQTQKLPSGLDTRPVSSYPDELTQLESNPDSFSR 301
Query: 389 L 387
L
Sbjct: 302 L 302
>UniRef50_Q8TVX9 Cluster: Predicted DNA methylase containing a
Zn-ribbon module; n=3; Methanopyrus kandleri|Rep:
Predicted DNA methylase containing a Zn-ribbon module -
Methanopyrus kandleri
Length = 948
Score = 33.1 bits (72), Expect = 5.9
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +1
Query: 103 TKKRKGAPKLRSLHYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKF-KTRKELF 273
T +R+ +L H+ + HG+++ + I+ GRG RD F + R+ELF
Sbjct: 292 TIQREQVHRLSRRHFEDEHGFVRAYLAAIVEGSGRGKEYRAATDRDLEFFERAREELF 349
>UniRef50_UPI00015564C7 Cluster: PREDICTED: similar to gene of
unknown function, partial; n=1; Ornithorhynchus
anatinus|Rep: PREDICTED: similar to gene of unknown
function, partial - Ornithorhynchus anatinus
Length = 416
Score = 32.7 bits (71), Expect = 7.8
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +1
Query: 61 RAQRKGAGSVFVS-HTKKRKGAPK--LRSLHYAERHGYIKGVVKDIIHDPGRGAPLAVV 228
+A R G F S H ++R+G P+ L SLH R G +GV+ + RG P V+
Sbjct: 227 QAPRNPEGRPFPSLHLRRRRGTPRGDLPSLHLRRRRGTPRGVLPSLHLRRHRGTPRGVL 285
>UniRef50_UPI0000D55437 Cluster: PREDICTED: similar to leprecan 1;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
leprecan 1 - Tribolium castaneum
Length = 694
Score = 32.7 bits (71), Expect = 7.8
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 121 APKLRSLHYAERHGYIKGVVKDIIHD 198
AP+ +LHY +RH Y + ++K I+H+
Sbjct: 337 APRAEALHYVQRHTYEQRILKFIVHE 362
>UniRef50_UPI000065ED52 Cluster: Complement C5 precursor [Contains:
Complement C5 beta chain; Complement C5 alpha chain; C5a
anaphylatoxin; Complement C5 alpha' chain].; n=1;
Takifugu rubripes|Rep: Complement C5 precursor [Contains:
Complement C5 beta chain; Complement C5 alpha chain; C5a
anaphylatoxin; Complement C5 alpha' chain]. - Takifugu
rubripes
Length = 1281
Score = 32.7 bits (71), Expect = 7.8
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Frame = +1
Query: 196 DPGRGAPLAVVHFRDPYKFKTRKELFIAPEG----LYTG-----QFVYCGKKATLEVGNV 348
+PG V+ + K K+L + PEG L +G Q +Y +K T+E+ N
Sbjct: 819 EPGEHTLTFVLKTQHGQKDVVEKKLRVVPEGIKRELLSGGRLDPQGLYGSQKITVELKNT 878
Query: 349 MPVGAMPEGTIVCNLEXKMGDRGRLARASGNFATVIGHNPDAKRTXVKLPSGA 507
+P +P T+V E + G + + T + H+PD R V LP+G+
Sbjct: 879 LPSNMVPN-TVV---ERMLTINGEVL----DDITSVVHSPDGLRQLVNLPAGS 923
>UniRef50_A5GJQ8 Cluster: 6-pyruvoyl tetrahydropterin synthase;
n=20; Cyanobacteria|Rep: 6-pyruvoyl tetrahydropterin
synthase - Synechococcus sp. (strain WH7803)
Length = 166
Score = 32.7 bits (71), Expect = 7.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 486 SKATVWSQEGSAIKQQRHGRYCCWKVDVLTN 578
S VW + +K++ GR CCWKV+ N
Sbjct: 110 SARLVWGWANTLLKERDGGRSCCWKVEAREN 140
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 697,031,795
Number of Sequences: 1657284
Number of extensions: 14777135
Number of successful extensions: 37523
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 36333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37490
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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