Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_H12
         (409 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical pr...    79   2e-15
Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical pr...    72   1e-13
AL117203-1|CAB55099.1|  115|Caenorhabditis elegans Hypothetical ...    28   2.3  

>Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical
           protein W01D2.1 protein.
          Length = 92

 Score = 78.6 bits (185), Expect = 2e-15
 Identities = 34/82 (41%), Positives = 45/82 (54%)
 Frame = +1

Query: 46  QASVSAEIRPIRYARRCGXSSYHIQKSKCAQCGYPAXKLRSYHWSVXAXXXXXXXXXXMR 225
           QA     ++     +RCG SS+HIQK +CA CGYP  K R+Y+W   +           R
Sbjct: 6   QAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYPDAKKRTYNWGAKSIRRRTTGTGRTR 65

Query: 226 HLKIVRRRFRNGFKEGKPTPPK 291
           HL+ V  RFRNGF+EG    P+
Sbjct: 66  HLRDVNARFRNGFREGTTPKPR 87



 Score = 34.7 bits (76), Expect = 0.026
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = +3

Query: 30 MTKGTSSFGKRRNKTHTLCTK 92
          MTKGT +FGK+  K+HTLC +
Sbjct: 1  MTKGTQAFGKKHVKSHTLCKR 21


>Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical
           protein C54C6.1 protein.
          Length = 91

 Score = 72.1 bits (169), Expect = 1e-13
 Identities = 32/80 (40%), Positives = 42/80 (52%)
 Frame = +1

Query: 46  QASVSAEIRPIRYARRCGXSSYHIQKSKCAQCGYPAXKLRSYHWSVXAXXXXXXXXXXMR 225
           QA     ++     +RCG SS+HIQK +CA CGY   K R+Y+W   +           R
Sbjct: 6   QAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTGTGRTR 65

Query: 226 HLKIVRRRFRNGFKEGKPTP 285
           HL+ V  RFRNGF+   P P
Sbjct: 66  HLRDVNARFRNGFRGTTPKP 85



 Score = 34.7 bits (76), Expect = 0.026
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = +3

Query: 30 MTKGTSSFGKRRNKTHTLCTK 92
          MTKGT +FGK+  K+HTLC +
Sbjct: 1  MTKGTQAFGKKHVKSHTLCKR 21


>AL117203-1|CAB55099.1|  115|Caenorhabditis elegans Hypothetical
           protein Y48C3A.1 protein.
          Length = 115

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -1

Query: 97  HIFVHNVWVLFRRLPKLEVPFVIXVTR 17
           H FV+N+ ++FR+ PK+     I V R
Sbjct: 29  HFFVYNLILIFRKFPKINAILKITVDR 55


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,115,233
Number of Sequences: 27780
Number of extensions: 119187
Number of successful extensions: 225
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 225
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 651753158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)